RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 APLNQ9ULZ1 77 aa6.07□□□□□ -1.44
TRIM39-202ENST00000376659 IGKV4-1P06312 121 aa6.06□□□□□ -1.44
TRIM39-202ENST00000376659 PSPHP1O15172 72 aa6.05□□□□□ -1.44
TRIM39-202ENST00000376659 A0A1W2PNM2 257 aa6.05□□□□□ -1.44
TRIM39-202ENST00000376659 COL6A5A8TX70 2615 aa6.05□□□□□ -1.44
TRIM39-202ENST00000376659 SPRR4Q96PI1 79 aa6.05□□□□□ -1.44
TRIM39-202ENST00000376659 Q6ZRN7 208 aaPredicted RBP6.04□□□□□ -1.44
TRIM39-202ENST00000376659 ST20-AS1Q8NBB2 130 aa6.04□□□□□ -1.44
TRIM39-202ENST00000376659 HAMPP81172 84 aa6.04□□□□□ -1.44
TRIM39-202ENST00000376659 DHRS4-AS1Q9P1J3 65 aa6.04□□□□□ -1.44
TRIM39-202ENST00000376659 SRRM2Q9UQ35 2752 aaKnown RBP6.04□□□□□ -1.44
TRIM39-202ENST00000376659 RPL37AP8A6NKH3 93 aa6.03□□□□□ -1.44
TRIM39-202ENST00000376659 HYDINQ4G0P3 5121 aa6.03□□□□□ -1.44
TRIM39-202ENST00000376659 TENM2Q9NT68 2774 aa6.03□□□□□ -1.44
TRIM39-202ENST00000376659 A0A096LNI7 61 aa6.03□□□□□ -1.44
TRIM39-202ENST00000376659 A0A1W2PNN7 141 aa6.02□□□□□ -1.45
TRIM39-202ENST00000376659 NKAPP1Q8N9T2 125 aa6.02□□□□□ -1.45
TRIM39-202ENST00000376659 STAB2Q8WWQ8 2551 aa6.02□□□□□ -1.45
TRIM39-202ENST00000376659 IGLV8-61A0A075B6I0 122 aa6.02□□□□□ -1.45
TRIM39-202ENST00000376659 C16orf90A8MZG2 172 aa6.01□□□□□ -1.45
TRIM39-202ENST00000376659 FUSP35637 526 aaKnown RBP eCLIP6.01□□□□□ -1.45
TRIM39-202ENST00000376659 LCE6AA0A183 80 aa6.01□□□□□ -1.45
TRIM39-202ENST00000376659 A0A1B0GW54 56 aa6.01□□□□□ -1.45
TRIM39-202ENST00000376659 SPTSSBQ8NFR3 76 aa6□□□□□ -1.45
TRIM39-202ENST00000376659 KTN1-AS1Q86SY8 53 aa6□□□□□ -1.45
TRIM39-202ENST00000376659 KRTAP13-1Q8IUC0 172 aa6□□□□□ -1.45
TRIM39-202ENST00000376659 TMEM254Q8TBM7 123 aa5.99□□□□□ -1.45
TRIM39-202ENST00000376659 OCR1Q9BZK8 76 aa5.99□□□□□ -1.45
TRIM39-202ENST00000376659 REG3GQ6UW15 175 aa5.98□□□□□ -1.45
TRIM39-202ENST00000376659 Q8NBF4 154 aa5.98□□□□□ -1.45
TRIM39-202ENST00000376659 SCXQ7RTU7 201 aa5.98□□□□□ -1.45
TRIM39-202ENST00000376659 Q8N9L7 120 aa5.97□□□□□ -1.45
TRIM39-202ENST00000376659 B9D2Q9BPU9 175 aa5.97□□□□□ -1.45
TRIM39-202ENST00000376659 A8MU10 97 aa5.96□□□□□ -1.45
TRIM39-202ENST00000376659 PANO1I0J062 215 aa5.96□□□□□ -1.45
TRIM39-202ENST00000376659 BPY2O14599 106 aa5.96□□□□□ -1.45
TRIM39-202ENST00000376659 DSCR10P59022 87 aa5.96□□□□□ -1.45
TRIM39-202ENST00000376659 MDFIQ99750 246 aa5.96□□□□□ -1.45
TRIM39-202ENST00000376659 H0Y9J4 135 aa5.96□□□□□ -1.46
TRIM39-202ENST00000376659 SPRR1BP22528 89 aa5.96□□□□□ -1.46
TRIM39-202ENST00000376659 NREPQ16612 68 aa5.95□□□□□ -1.46
TRIM39-202ENST00000376659 C1orf137Q5JT78 98 aa5.94□□□□□ -1.46
TRIM39-202ENST00000376659 C3orf84H3BNL1 204 aa5.94□□□□□ -1.46
TRIM39-202ENST00000376659 ETDCA0A1B0GVM5 59 aa5.94□□□□□ -1.46
TRIM39-202ENST00000376659 C8orf87E5RJ46 101 aa5.94□□□□□ -1.46
TRIM39-202ENST00000376659 IGFL1Q6UW32 110 aa5.94□□□□□ -1.46
TRIM39-202ENST00000376659 DEFB105AQ8NG35 78 aa5.94□□□□□ -1.46
TRIM39-202ENST00000376659 LINC00476Q8WZB0 136 aa5.94□□□□□ -1.46
TRIM39-202ENST00000376659 TRAV22A0A0B4J277 110 aa5.93□□□□□ -1.46
TRIM39-202ENST00000376659 UBE2BP63146 152 aa5.93□□□□□ -1.46
TRIM39-202ENST00000376659 A8MUN3 132 aa5.92□□□□□ -1.46
TRIM39-202ENST00000376659 C9orf163Q8N9P6 203 aa5.92□□□□□ -1.46
TRIM39-202ENST00000376659 Q1T7F1 81 aa5.92□□□□□ -1.46
TRIM39-202ENST00000376659 CHTF8P0CG12 524 aa5.91□□□□□ -1.46
TRIM39-202ENST00000376659 A0A0G2JQZ4 141 aa5.91□□□□□ -1.46
TRIM39-202ENST00000376659 PRLHP81277 87 aa5.9□□□□□ -1.46
TRIM39-202ENST00000376659 PHF5AQ7RTV0 110 aaKnown RBP5.9□□□□□ -1.46
TRIM39-202ENST00000376659 NDUFS5O43920 106 aa5.9□□□□□ -1.47
TRIM39-202ENST00000376659 SPACA4Q8TDM5 124 aa5.9□□□□□ -1.47
TRIM39-202ENST00000376659 ZCCHC13Q8WW36 166 aaKnown RBP5.9□□□□□ -1.47
TRIM39-202ENST00000376659 NBDYA0A0U1RRE5 68 aa5.9□□□□□ -1.47
TRIM39-202ENST00000376659 hDV103S1A0JD37 113 aa5.9□□□□□ -1.47
TRIM39-202ENST00000376659 CHKB-CPT1BH3BT56 60 aa5.89□□□□□ -1.47
TRIM39-202ENST00000376659 HIGD2AQ9BW72 106 aa5.89□□□□□ -1.47
TRIM39-202ENST00000376659 VPS13BQ7Z7G8 4022 aa5.89□□□□□ -1.47
TRIM39-202ENST00000376659 K7EQZ3 153 aa5.88□□□□□ -1.47
TRIM39-202ENST00000376659 C1orf64Q8NEQ6 169 aa5.88□□□□□ -1.47
TRIM39-202ENST00000376659 PRR4Q16378 134 aa5.87□□□□□ -1.47
TRIM39-202ENST00000376659 LRP1BQ9NZR2 4599 aa5.87□□□□□ -1.47
TRIM39-202ENST00000376659 KRTAP21-3Q3LHN1 58 aa5.87□□□□□ -1.47
TRIM39-202ENST00000376659 KRTAP29-1A8MX34 341 aaPredicted RBP5.86□□□□□ -1.47
TRIM39-202ENST00000376659 Q6ZR54 194 aa5.86□□□□□ -1.47
TRIM39-202ENST00000376659 LINC00483Q53H64 154 aa5.86□□□□□ -1.47
TRIM39-202ENST00000376659 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.86□□□□□ -1.47
TRIM39-202ENST00000376659 C14orf177Q52M58 125 aa5.86□□□□□ -1.47
TRIM39-202ENST00000376659 IGKV2-24A0A0C4DH68 120 aa5.85□□□□□ -1.47
TRIM39-202ENST00000376659 HCG22E2RYF7 251 aa5.85□□□□□ -1.47
TRIM39-202ENST00000376659 Q96NJ1 140 aa5.85□□□□□ -1.47
TRIM39-202ENST00000376659 UBE2AP49459 152 aa5.85□□□□□ -1.47
TRIM39-202ENST00000376659 PRR26Q8N8Z3 221 aa5.85□□□□□ -1.47
TRIM39-202ENST00000376659 PKHD1P08F94 4074 aa5.84□□□□□ -1.47
TRIM39-202ENST00000376659 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.84□□□□□ -1.47
TRIM39-202ENST00000376659 LINC00472Q9H8W2 130 aa5.84□□□□□ -1.47
TRIM39-202ENST00000376659 SACSQ9NZJ4 4579 aa5.84□□□□□ -1.47
TRIM39-202ENST00000376659 NUPR2A6NF83 97 aa5.84□□□□□ -1.47
TRIM39-202ENST00000376659 PKHD1L1Q86WI1 4243 aa5.83□□□□□ -1.48
TRIM39-202ENST00000376659 ASB16-AS1Q495Z4 193 aa5.83□□□□□ -1.48
TRIM39-202ENST00000376659 LCA10Q71F78 164 aa5.82□□□□□ -1.48
TRIM39-202ENST00000376659 ATP11AUNQ6ZP68 121 aa5.82□□□□□ -1.48
TRIM39-202ENST00000376659 PSCAO43653 123 aa5.81□□□□□ -1.48
TRIM39-202ENST00000376659 A6NED7 52 aa5.81□□□□□ -1.48
TRIM39-202ENST00000376659 Q5VV11 94 aa5.81□□□□□ -1.48
TRIM39-202ENST00000376659 C7orf65Q6ZTY9 151 aa5.81□□□□□ -1.48
TRIM39-202ENST00000376659 A0A087WTM6 91 aa5.8□□□□□ -1.48
TRIM39-202ENST00000376659 UBE2DNLQ8IWF7 75 aa5.8□□□□□ -1.48
TRIM39-202ENST00000376659 PRR15LQ9BU68 103 aa5.79□□□□□ -1.48
TRIM39-202ENST00000376659 PLAC8Q9NZF1 115 aa5.78□□□□□ -1.48
TRIM39-202ENST00000376659 FAM30AQ9NZY2 134 aa5.78□□□□□ -1.48
TRIM39-202ENST00000376659 A0A087WSZ3 146 aa5.77□□□□□ -1.49
TRIM39-202ENST00000376659 A6NN06 94 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms