RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 MMP24-AS1A0A0U1RRL7 71 aa12.39□□□□□ -0.43
COL15A1-201ENST00000375001 ITPR3Q14573 2671 aa12.38□□□□□ -0.43
COL15A1-201ENST00000375001 ATRQ13535 2644 aa12.37□□□□□ -0.43
COL15A1-201ENST00000375001 BRCA2P51587 3418 aa12.36□□□□□ -0.43
COL15A1-201ENST00000375001 Q8NDZ9 215 aa12.34□□□□□ -0.43
COL15A1-201ENST00000375001 AKAP13Q12802 2813 aa12.33□□□□□ -0.44
COL15A1-201ENST00000375001 MGAQ8IWI9 3026 aa12.32□□□□□ -0.44
COL15A1-201ENST00000375001 KRTAP1-1Q07627 177 aa12.31□□□□□ -0.44
COL15A1-201ENST00000375001 TRANK1O15050 2925 aa12.26□□□□□ -0.45
COL15A1-201ENST00000375001 MAST4O15021 2626 aa12.25□□□□□ -0.45
COL15A1-201ENST00000375001 CHD6Q8TD26 2715 aa12.24□□□□□ -0.45
COL15A1-201ENST00000375001 FLG2Q5D862 2391 aaPredicted RBP12.24□□□□□ -0.45
COL15A1-201ENST00000375001 UNC80Q8N2C7 3258 aa12.22□□□□□ -0.45
COL15A1-201ENST00000375001 WDFY4Q6ZS81 3184 aa12.22□□□□□ -0.45
COL15A1-201ENST00000375001 Q5W150 140 aa12.21□□□□□ -0.45
COL15A1-201ENST00000375001 Q6ZSA8 131 aa12.21□□□□□ -0.45
COL15A1-201ENST00000375001 ZCCHC13Q8WW36 166 aaKnown RBP12.19□□□□□ -0.46
COL15A1-201ENST00000375001 TRIOO75962 3097 aa12.18□□□□□ -0.46
COL15A1-201ENST00000375001 CFAP46Q8IYW2 2715 aa12.17□□□□□ -0.46
COL15A1-201ENST00000375001 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.16□□□□□ -0.46
COL15A1-201ENST00000375001 LINC00472Q9H8W2 130 aa12.14□□□□□ -0.47
COL15A1-201ENST00000375001 PRUNE2Q8WUY3 3088 aa12.14□□□□□ -0.47
COL15A1-201ENST00000375001 ROMO1P60602 79 aa12.14□□□□□ -0.47
COL15A1-201ENST00000375001 XIRP2A4UGR9 3374 aa12.12□□□□□ -0.47
COL15A1-201ENST00000375001 S4R3F8 94 aa12.1□□□□□ -0.47
COL15A1-201ENST00000375001 RPL37P61927 97 aaKnown RBP12.09□□□□□ -0.47
COL15A1-201ENST00000375001 SPRR1AP35321 89 aa12.09□□□□□ -0.47
COL15A1-201ENST00000375001 M0R2T5 61 aa12.08□□□□□ -0.48
COL15A1-201ENST00000375001 HELZ2Q9BYK8 2649 aaKnown RBP12.07□□□□□ -0.48
COL15A1-201ENST00000375001 MAP1AP78559 2803 aaPredicted RBP12.07□□□□□ -0.48
COL15A1-201ENST00000375001 VPS13AQ96RL7 3174 aa12.06□□□□□ -0.48
COL15A1-201ENST00000375001 GCN1Q92616 2671 aaKnown RBP12.04□□□□□ -0.48
COL15A1-201ENST00000375001 FREM2Q5SZK8 3169 aa12.03□□□□□ -0.48
COL15A1-201ENST00000375001 TNP2Q05952 138 aa12.03□□□□□ -0.48
COL15A1-201ENST00000375001 KRTAP16-1A8MUX0 517 aa12.01□□□□□ -0.49
COL15A1-201ENST00000375001 R4GN34 69 aa12.01□□□□□ -0.49
COL15A1-201ENST00000375001 FRYQ5TBA9 3013 aa12.01□□□□□ -0.49
COL15A1-201ENST00000375001 UNC79Q9P2D8 2635 aa11.97□□□□□ -0.49
COL15A1-201ENST00000375001 H1FX-AS1Q4G0G2 97 aa11.97□□□□□ -0.49
COL15A1-201ENST00000375001 ZNF292O60281 2723 aa11.96□□□□□ -0.49
COL15A1-201ENST00000375001 SPRR1BP22528 89 aa11.96□□□□□ -0.49
COL15A1-201ENST00000375001 ASB16-AS1Q495Z4 193 aa11.96□□□□□ -0.49
COL15A1-201ENST00000375001 KRTAP26-1Q6PEX3 210 aa11.93□□□□□ -0.5
COL15A1-201ENST00000375001 CELSR3Q9NYQ7 3312 aa11.93□□□□□ -0.5
COL15A1-201ENST00000375001 DSPP15924 2871 aaKnown RBP11.91□□□□□ -0.5
COL15A1-201ENST00000375001 TEX15Q9BXT5 2789 aa11.91□□□□□ -0.5
COL15A1-201ENST00000375001 SPATA8Q6RVD6 105 aa11.91□□□□□ -0.5
COL15A1-201ENST00000375001 CDH23Q9H251 3354 aa11.9□□□□□ -0.5
COL15A1-201ENST00000375001 NBEAL2Q6ZNJ1 2754 aa11.89□□□□□ -0.51
COL15A1-201ENST00000375001 PLAC8Q9NZF1 115 aa11.87□□□□□ -0.51
COL15A1-201ENST00000375001 NBEAL1Q6ZS30 2694 aa11.85□□□□□ -0.51
COL15A1-201ENST00000375001 A6NN06 94 aa11.83□□□□□ -0.51
COL15A1-201ENST00000375001 NOTCH1P46531 2555 aa11.82□□□□□ -0.52
COL15A1-201ENST00000375001 NBEAQ8NFP9 2946 aa11.81□□□□□ -0.52
COL15A1-201ENST00000375001 Q6ZR54 194 aa11.81□□□□□ -0.52
COL15A1-201ENST00000375001 DMBT1Q9UGM3 2413 aaPredicted RBP11.8□□□□□ -0.52
COL15A1-201ENST00000375001 M0QZ58 72 aa11.8□□□□□ -0.52
COL15A1-201ENST00000375001 TEP1Q99973 2627 aaKnown RBP11.78□□□□□ -0.52
COL15A1-201ENST00000375001 STAB1Q9NY15 2570 aa11.77□□□□□ -0.52
COL15A1-201ENST00000375001 KRTAP1-5Q9BYS1 174 aa11.77□□□□□ -0.52
COL15A1-201ENST00000375001 KRTAP29-1A8MX34 341 aaPredicted RBP11.77□□□□□ -0.53
COL15A1-201ENST00000375001 KRTAP25-1Q3LHN0 102 aa11.75□□□□□ -0.53
COL15A1-201ENST00000375001 KALRNO60229 2985 aa11.75□□□□□ -0.53
COL15A1-201ENST00000375001 ADM2Q7Z4H4 148 aa11.74□□□□□ -0.53
COL15A1-201ENST00000375001 DNAH14Q0VDD8 3507 aa11.74□□□□□ -0.53
COL15A1-201ENST00000375001 VCANP13611 3396 aa11.72□□□□□ -0.53
COL15A1-201ENST00000375001 LAMA1P25391 3075 aa11.71□□□□□ -0.53
COL15A1-201ENST00000375001 NDUFAF8A1L188 74 aa11.69□□□□□ -0.54
COL15A1-201ENST00000375001 KRTAP4-16G5E9R7 235 aaPredicted RBP11.67□□□□□ -0.54
COL15A1-201ENST00000375001 COL6A5A8TX70 2615 aa11.64□□□□□ -0.55
COL15A1-201ENST00000375001 SETXQ7Z333 2677 aaKnown RBP11.64□□□□□ -0.55
COL15A1-201ENST00000375001 A8MU10 97 aa11.63□□□□□ -0.55
COL15A1-201ENST00000375001 UBR5O95071 2799 aaPredicted RBP11.63□□□□□ -0.55
COL15A1-201ENST00000375001 STAB2Q8WWQ8 2551 aa11.61□□□□□ -0.55
COL15A1-201ENST00000375001 SZT2Q5T011 3432 aa11.57□□□□□ -0.56
COL15A1-201ENST00000375001 A0A087X002 238 aa11.56□□□□□ -0.56
COL15A1-201ENST00000375001 SEC61BP60468 96 aaKnown RBP11.56□□□□□ -0.56
COL15A1-201ENST00000375001 NOTCH2NLQ7Z3S9 236 aa11.56□□□□□ -0.56
COL15A1-201ENST00000375001 PLAC4Q8WY50 150 aa11.56□□□□□ -0.56
COL15A1-201ENST00000375001 PANO1I0J062 215 aa11.54□□□□□ -0.56
COL15A1-201ENST00000375001 IGSF10Q6WRI0 2623 aa11.52□□□□□ -0.57
COL15A1-201ENST00000375001 ADGRG4Q8IZF6 3080 aa11.5□□□□□ -0.57
COL15A1-201ENST00000375001 DMXL2Q8TDJ6 3036 aa11.49□□□□□ -0.57
COL15A1-201ENST00000375001 BOD1L1Q8NFC6 3051 aa11.47□□□□□ -0.57
COL15A1-201ENST00000375001 ATMQ13315 3056 aa11.47□□□□□ -0.57
COL15A1-201ENST00000375001 FRYLO94915 3013 aa11.46□□□□□ -0.57
COL15A1-201ENST00000375001 C20orf166-AS1Q96NR2 134 aa11.45□□□□□ -0.58
COL15A1-201ENST00000375001 TACC2O95359 2948 aa11.45□□□□□ -0.58
COL15A1-201ENST00000375001 ASH1LQ9NR48 2969 aaKnown RBP11.43□□□□□ -0.58
COL15A1-201ENST00000375001 LRBAP50851 2863 aa11.43□□□□□ -0.58
COL15A1-201ENST00000375001 LCE6AA0A183 80 aa11.42□□□□□ -0.58
COL15A1-201ENST00000375001 BAHCC1Q9P281 2608 aa11.42□□□□□ -0.58
COL15A1-201ENST00000375001 ITPR1Q14643 2758 aa11.41□□□□□ -0.58
COL15A1-201ENST00000375001 KRTAP10-1P60331 282 aa11.38□□□□□ -0.59
COL15A1-201ENST00000375001 KRTAP11-1Q8IUC1 163 aa11.37□□□□□ -0.59
COL15A1-201ENST00000375001 COL6A3P12111 3177 aa11.37□□□□□ -0.59
COL15A1-201ENST00000375001 KRTAP10-2P60368 255 aa11.36□□□□□ -0.59
COL15A1-201ENST00000375001 KRTAP7-1Q8IUC3 87 aa11.34□□□□□ -0.59
COL15A1-201ENST00000375001 FLNCQ14315 2725 aa11.33□□□□□ -0.6
COL15A1-201ENST00000375001 NSD1Q96L73 2696 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms