RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 A0A0G2JQZ4 141 aa7.15□□□□□ -1.27
PTPN20-204ENST00000374346 ZCCHC13Q8WW36 166 aaKnown RBP7.15□□□□□ -1.27
PTPN20-204ENST00000374346 PRO0628Q9UI54 55 aa7.15□□□□□ -1.27
PTPN20-204ENST00000374346 SPRR1BP22528 89 aa7.13□□□□□ -1.27
PTPN20-204ENST00000374346 DEFB116Q30KQ4 102 aa7.13□□□□□ -1.27
PTPN20-204ENST00000374346 LINC00336Q6ZUF6 198 aa7.13□□□□□ -1.27
PTPN20-204ENST00000374346 B9D2Q9BPU9 175 aa7.13□□□□□ -1.27
PTPN20-204ENST00000374346 PHF5AQ7RTV0 110 aaKnown RBP7.13□□□□□ -1.27
PTPN20-204ENST00000374346 WFDC13Q8IUB5 93 aa7.13□□□□□ -1.27
PTPN20-204ENST00000374346 MPLKIPQ8TAP9 179 aa7.12□□□□□ -1.27
PTPN20-204ENST00000374346 FAM229BQ4G0N7 80 aa7.12□□□□□ -1.27
PTPN20-204ENST00000374346 NBEAL1Q6ZS30 2694 aa7.12□□□□□ -1.27
PTPN20-204ENST00000374346 APLNQ9ULZ1 77 aa7.11□□□□□ -1.27
PTPN20-204ENST00000374346 BAHCC1Q9P281 2608 aa7.11□□□□□ -1.27
PTPN20-204ENST00000374346 hDV103S1A0JD37 113 aa7.11□□□□□ -1.27
PTPN20-204ENST00000374346 CHTF8P0CG12 524 aa7.1□□□□□ -1.27
PTPN20-204ENST00000374346 C9orf163Q8N9P6 203 aa7.1□□□□□ -1.27
PTPN20-204ENST00000374346 HUWE1Q7Z6Z7 4374 aaKnown RBP7.1□□□□□ -1.27
PTPN20-204ENST00000374346 A8MWP4 228 aa7.09□□□□□ -1.27
PTPN20-204ENST00000374346 CASC2Q6XLA1 102 aa7.09□□□□□ -1.27
PTPN20-204ENST00000374346 PRR15Q8IV56 129 aa7.09□□□□□ -1.27
PTPN20-204ENST00000374346 C1orf64Q8NEQ6 169 aa7.08□□□□□ -1.28
PTPN20-204ENST00000374346 H3BPC8 53 aa7.08□□□□□ -1.28
PTPN20-204ENST00000374346 RPL37AP61513 92 aaKnown RBP7.08□□□□□ -1.28
PTPN20-204ENST00000374346 CYP4F30PQ9H0H9 118 aa7.08□□□□□ -1.28
PTPN20-204ENST00000374346 COL6A5A8TX70 2615 aa7.07□□□□□ -1.28
PTPN20-204ENST00000374346 KRTAP29-1A8MX34 341 aaPredicted RBP7.07□□□□□ -1.28
PTPN20-204ENST00000374346 KRTAP11-1Q8IUC1 163 aa7.06□□□□□ -1.28
PTPN20-204ENST00000374346 TRAV22A0A0B4J277 110 aa7.06□□□□□ -1.28
PTPN20-204ENST00000374346 BRK1Q8WUW1 75 aa7.06□□□□□ -1.28
PTPN20-204ENST00000374346 LINC00472Q9H8W2 130 aa7.06□□□□□ -1.28
PTPN20-204ENST00000374346 LINC00208Q96KT6 92 aa7.05□□□□□ -1.28
PTPN20-204ENST00000374346 NBDYA0A0U1RRE5 68 aa7.05□□□□□ -1.28
PTPN20-204ENST00000374346 LRCOL1A6NCL2 159 aa7.05□□□□□ -1.28
PTPN20-204ENST00000374346 H0Y9P7 68 aa7.04□□□□□ -1.28
PTPN20-204ENST00000374346 NUPR2A6NF83 97 aa7.03□□□□□ -1.28
PTPN20-204ENST00000374346 Q1T7F1 81 aa7.03□□□□□ -1.28
PTPN20-204ENST00000374346 LYSTQ99698 3801 aa7.03□□□□□ -1.28
PTPN20-204ENST00000374346 SPANXA2-OT1Q8N9U9 137 aa7.02□□□□□ -1.29
PTPN20-204ENST00000374346 PRR4Q16378 134 aa7.01□□□□□ -1.29
PTPN20-204ENST00000374346 MDFIQ99750 246 aa7.01□□□□□ -1.29
PTPN20-204ENST00000374346 DNAH10Q8IVF4 4471 aa7.01□□□□□ -1.29
PTPN20-204ENST00000374346 KRTAP13-1Q8IUC0 172 aa7.01□□□□□ -1.29
PTPN20-204ENST00000374346 STAB2Q8WWQ8 2551 aa7□□□□□ -1.29
PTPN20-204ENST00000374346 V9GYY9 64 aa7□□□□□ -1.29
PTPN20-204ENST00000374346 ZNF706Q9Y5V0 76 aaPredicted RBP6.99□□□□□ -1.29
PTPN20-204ENST00000374346 MGAM2Q2M2H8 2515 aa6.99□□□□□ -1.29
PTPN20-204ENST00000374346 Q6ZRN7 208 aaPredicted RBP6.98□□□□□ -1.29
PTPN20-204ENST00000374346 SPACA4Q8TDM5 124 aa6.98□□□□□ -1.29
PTPN20-204ENST00000374346 IGLV9-49A0A0B4J1Y8 123 aa6.98□□□□□ -1.29
PTPN20-204ENST00000374346 DNAH9Q9NYC9 4486 aa6.97□□□□□ -1.29
PTPN20-204ENST00000374346 MMP24-AS1A0A0U1RRL7 71 aa6.96□□□□□ -1.29
PTPN20-204ENST00000374346 TP53AIP1Q9HCN2 124 aa6.96□□□□□ -1.29
PTPN20-204ENST00000374346 PANO1I0J062 215 aa6.96□□□□□ -1.3
PTPN20-204ENST00000374346 MOBPQ13875 183 aa6.96□□□□□ -1.3
PTPN20-204ENST00000374346 COL7A1Q02388 2944 aa6.95□□□□□ -1.3
PTPN20-204ENST00000374346 LINC00483Q53H64 154 aa6.95□□□□□ -1.3
PTPN20-204ENST00000374346 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.94□□□□□ -1.3
PTPN20-204ENST00000374346 SRRM2Q9UQ35 2752 aaKnown RBP6.94□□□□□ -1.3
PTPN20-204ENST00000374346 CDK2AP2O75956 126 aa6.93□□□□□ -1.3
PTPN20-204ENST00000374346 A0A087WTM6 91 aa6.91□□□□□ -1.3
PTPN20-204ENST00000374346 PSPHP1O15172 72 aa6.91□□□□□ -1.3
PTPN20-204ENST00000374346 Q96NJ1 140 aa6.91□□□□□ -1.3
PTPN20-204ENST00000374346 DNAH7Q8WXX0 4024 aa6.9□□□□□ -1.3
PTPN20-204ENST00000374346 C8orf17Q9NRJ1 99 aa6.9□□□□□ -1.31
PTPN20-204ENST00000374346 IGLV5-52A0A0A0MRZ9 124 aa6.89□□□□□ -1.31
PTPN20-204ENST00000374346 ASB16-AS1Q495Z4 193 aa6.89□□□□□ -1.31
PTPN20-204ENST00000374346 C1orf195Q5TG92 126 aa6.89□□□□□ -1.31
PTPN20-204ENST00000374346 LIMD2Q9BT23 127 aa6.89□□□□□ -1.31
PTPN20-204ENST00000374346 DYNC2H1Q8NCM8 4307 aaKnown RBP6.89□□□□□ -1.31
PTPN20-204ENST00000374346 IGLV7-46A0A075B6I9 117 aa6.89□□□□□ -1.31
PTPN20-204ENST00000374346 A0A1B0GVX0 72 aa6.89□□□□□ -1.31
PTPN20-204ENST00000374346 RTL8CO15255 209 aa6.89□□□□□ -1.31
PTPN20-204ENST00000374346 CSMD3Q7Z407 3707 aa6.89□□□□□ -1.31
PTPN20-204ENST00000374346 WWC2-AS2Q96NR7 200 aa6.88□□□□□ -1.31
PTPN20-204ENST00000374346 PSORS1C2Q9UIG4 136 aa6.88□□□□□ -1.31
PTPN20-204ENST00000374346 TENM2Q9NT68 2774 aa6.88□□□□□ -1.31
PTPN20-204ENST00000374346 IGHV6-1A0A0B4J1U7 121 aa6.88□□□□□ -1.31
PTPN20-204ENST00000374346 NDUFS5O43920 106 aa6.88□□□□□ -1.31
PTPN20-204ENST00000374346 ZNF861PO60384 105 aa6.88□□□□□ -1.31
PTPN20-204ENST00000374346 Q6ZR54 194 aa6.86□□□□□ -1.31
PTPN20-204ENST00000374346 PLAC8Q9NZF1 115 aa6.86□□□□□ -1.31
PTPN20-204ENST00000374346 A8MUN3 132 aa6.85□□□□□ -1.31
PTPN20-204ENST00000374346 MRPL34Q9BQ48 92 aaKnown RBP6.85□□□□□ -1.31
PTPN20-204ENST00000374346 Q8N9P0 234 aaPredicted RBP6.84□□□□□ -1.31
PTPN20-204ENST00000374346 PCOTHQ58A44 107 aa6.84□□□□□ -1.32
PTPN20-204ENST00000374346 COA5Q86WW8 74 aa6.84□□□□□ -1.32
PTPN20-204ENST00000374346 PLECQ15149 4684 aaKnown RBP6.81□□□□□ -1.32
PTPN20-204ENST00000374346 Q5VV11 94 aa6.81□□□□□ -1.32
PTPN20-204ENST00000374346 CD164Q04900 197 aa6.8□□□□□ -1.32
PTPN20-204ENST00000374346 ANAPC11Q9NYG5 84 aa6.8□□□□□ -1.32
PTPN20-204ENST00000374346 CHKB-CPT1BH3BT56 60 aa6.79□□□□□ -1.32
PTPN20-204ENST00000374346 PRR15LQ9BU68 103 aa6.79□□□□□ -1.32
PTPN20-204ENST00000374346 IGLV7-43P04211 117 aa6.78□□□□□ -1.32
PTPN20-204ENST00000374346 LCE2DQ5TA82 110 aaPredicted RBP6.78□□□□□ -1.32
PTPN20-204ENST00000374346 C1orf134Q5TEV5 83 aa6.78□□□□□ -1.32
PTPN20-204ENST00000374346 LOC101927531A0A1B0GV80 90 aa6.77□□□□□ -1.33
PTPN20-204ENST00000374346 SPINK6Q6UWN8 80 aa6.76□□□□□ -1.33
PTPN20-204ENST00000374346 CIRBP-AS1Q8TBR5 109 aa6.75□□□□□ -1.33
PTPN20-204ENST00000374346 SSBP3-AS1Q7Z2R9 100 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms