RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 A0A1W2PNN7 141 aa5.49□□□□□ -1.53
SNRNP40-202ENST00000373720 BPY2O14599 106 aa5.49□□□□□ -1.53
SNRNP40-202ENST00000373720 ERC2-IT1O76042 136 aa5.49□□□□□ -1.53
SNRNP40-202ENST00000373720 DEFB105AQ8NG35 78 aa5.49□□□□□ -1.53
SNRNP40-202ENST00000373720 SPACA4Q8TDM5 124 aa5.49□□□□□ -1.53
SNRNP40-202ENST00000373720 IGKV2-24A0A0C4DH68 120 aa5.48□□□□□ -1.53
SNRNP40-202ENST00000373720 C9orf153Q5TBE3 101 aa5.48□□□□□ -1.53
SNRNP40-202ENST00000373720 C1orf134Q5TEV5 83 aa5.48□□□□□ -1.53
SNRNP40-202ENST00000373720 FBN3Q75N90 2809 aa5.47□□□□□ -1.53
SNRNP40-202ENST00000373720 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.47□□□□□ -1.53
SNRNP40-202ENST00000373720 NDUFC1O43677 76 aa5.47□□□□□ -1.53
SNRNP40-202ENST00000373720 UBE2AP49459 152 aa5.47□□□□□ -1.53
SNRNP40-202ENST00000373720 C3orf84H3BNL1 204 aa5.46□□□□□ -1.54
SNRNP40-202ENST00000373720 SMIM29Q86T20 159 aa5.46□□□□□ -1.54
SNRNP40-202ENST00000373720 DPH3Q96FX2 82 aa5.46□□□□□ -1.54
SNRNP40-202ENST00000373720 WWC2-AS2Q96NR7 200 aa5.46□□□□□ -1.54
SNRNP40-202ENST00000373720 PLAC8Q9NZF1 115 aa5.46□□□□□ -1.54
SNRNP40-202ENST00000373720 DYNC2H1Q8NCM8 4307 aaKnown RBP5.45□□□□□ -1.54
SNRNP40-202ENST00000373720 CCDC179H3BU77 68 aa5.45□□□□□ -1.54
SNRNP40-202ENST00000373720 J3KT08 172 aa5.45□□□□□ -1.54
SNRNP40-202ENST00000373720 KRTAP5-3Q6L8H2 238 aa5.45□□□□□ -1.54
SNRNP40-202ENST00000373720 TMEM258P61165 79 aa5.44□□□□□ -1.54
SNRNP40-202ENST00000373720 KRTAP13-1Q8IUC0 172 aa5.44□□□□□ -1.54
SNRNP40-202ENST00000373720 HIGD2AQ9BW72 106 aa5.44□□□□□ -1.54
SNRNP40-202ENST00000373720 DNAH1Q9P2D7 4330 aa5.44□□□□□ -1.54
SNRNP40-202ENST00000373720 DNAH9Q9NYC9 4486 aa5.43□□□□□ -1.54
SNRNP40-202ENST00000373720 A0A1W2PNM2 257 aa5.43□□□□□ -1.54
SNRNP40-202ENST00000373720 H3BS24 57 aa5.43□□□□□ -1.54
SNRNP40-202ENST00000373720 RTL8CO15255 209 aa5.43□□□□□ -1.54
SNRNP40-202ENST00000373720 LINC00476Q8WZB0 136 aa5.43□□□□□ -1.54
SNRNP40-202ENST00000373720 A0A087WVE0 104 aa5.42□□□□□ -1.54
SNRNP40-202ENST00000373720 RPS28P62857 69 aaKnown RBP5.42□□□□□ -1.54
SNRNP40-202ENST00000373720 LINC00483Q53H64 154 aa5.42□□□□□ -1.54
SNRNP40-202ENST00000373720 PHF5AQ7RTV0 110 aaKnown RBP5.42□□□□□ -1.54
SNRNP40-202ENST00000373720 ST20-AS1Q8NBB2 130 aa5.42□□□□□ -1.54
SNRNP40-202ENST00000373720 SS18L2Q9UHA2 77 aa5.42□□□□□ -1.54
SNRNP40-202ENST00000373720 IGLV5-52A0A0A0MRZ9 124 aa5.41□□□□□ -1.54
SNRNP40-202ENST00000373720 M0R2N4 97 aa5.41□□□□□ -1.54
SNRNP40-202ENST00000373720 PRLHP81277 87 aa5.41□□□□□ -1.54
SNRNP40-202ENST00000373720 KLKP1Q107X0 134 aa5.41□□□□□ -1.54
SNRNP40-202ENST00000373720 COL7A1Q02388 2944 aa5.41□□□□□ -1.54
SNRNP40-202ENST00000373720 IGFL1Q6UW32 110 aa5.4□□□□□ -1.54
SNRNP40-202ENST00000373720 ZNF861PO60384 105 aa5.39□□□□□ -1.55
SNRNP40-202ENST00000373720 IGKV4-1P06312 121 aa5.39□□□□□ -1.55
SNRNP40-202ENST00000373720 ATP5EP56381 51 aaPredicted RBP5.39□□□□□ -1.55
SNRNP40-202ENST00000373720 CHTF8P0CG12 524 aa5.38□□□□□ -1.55
SNRNP40-202ENST00000373720 NDUFB1O75438 58 aa5.36□□□□□ -1.55
SNRNP40-202ENST00000373720 LY6G6CO95867 125 aa5.36□□□□□ -1.55
SNRNP40-202ENST00000373720 CD164Q04900 197 aa5.36□□□□□ -1.55
SNRNP40-202ENST00000373720 C5orf47Q569G3 176 aa5.36□□□□□ -1.55
SNRNP40-202ENST00000373720 H3BPC8 53 aa5.35□□□□□ -1.55
SNRNP40-202ENST00000373720 SSBP3-AS1Q7Z2R9 100 aa5.34□□□□□ -1.55
SNRNP40-202ENST00000373720 OCR1Q9BZK8 76 aa5.34□□□□□ -1.55
SNRNP40-202ENST00000373720 A0A087WSZ3 146 aa5.33□□□□□ -1.56
SNRNP40-202ENST00000373720 HCG22E2RYF7 251 aa5.33□□□□□ -1.56
SNRNP40-202ENST00000373720 DSCR10P59022 87 aa5.33□□□□□ -1.56
SNRNP40-202ENST00000373720 PSORS1C2Q9UIG4 136 aa5.33□□□□□ -1.56
SNRNP40-202ENST00000373720 LCE6AA0A183 80 aa5.32□□□□□ -1.56
SNRNP40-202ENST00000373720 A8MWP4 228 aa5.32□□□□□ -1.56
SNRNP40-202ENST00000373720 C20orf197Q8N268 126 aa5.32□□□□□ -1.56
SNRNP40-202ENST00000373720 LINC00472Q9H8W2 130 aa5.32□□□□□ -1.56
SNRNP40-202ENST00000373720 PANO1I0J062 215 aa5.31□□□□□ -1.56
SNRNP40-202ENST00000373720 IGLV7-43P04211 117 aa5.31□□□□□ -1.56
SNRNP40-202ENST00000373720 FAM229BQ4G0N7 80 aa5.31□□□□□ -1.56
SNRNP40-202ENST00000373720 Q6ZSA8 131 aa5.31□□□□□ -1.56
SNRNP40-202ENST00000373720 LINC00336Q6ZUF6 198 aa5.31□□□□□ -1.56
SNRNP40-202ENST00000373720 KRTAP11-1Q8IUC1 163 aa5.31□□□□□ -1.56
SNRNP40-202ENST00000373720 PRR15Q8IV56 129 aa5.31□□□□□ -1.56
SNRNP40-202ENST00000373720 TMEM254Q8TBM7 123 aa5.31□□□□□ -1.56
SNRNP40-202ENST00000373720 MEGF8Q7Z7M0 2845 aa5.3□□□□□ -1.56
SNRNP40-202ENST00000373720 ASB16-AS1Q495Z4 193 aa5.3□□□□□ -1.56
SNRNP40-202ENST00000373720 SCXQ7RTU7 201 aa5.3□□□□□ -1.56
SNRNP40-202ENST00000373720 TP53AIP1Q9HCN2 124 aa5.3□□□□□ -1.56
SNRNP40-202ENST00000373720 DNAH7Q8WXX0 4024 aa5.3□□□□□ -1.56
SNRNP40-202ENST00000373720 CSMD3Q7Z407 3707 aa5.29□□□□□ -1.56
SNRNP40-202ENST00000373720 VPS13DQ5THJ4 4388 aa5.29□□□□□ -1.56
SNRNP40-202ENST00000373720 K7EQZ3 153 aa5.28□□□□□ -1.56
SNRNP40-202ENST00000373720 MP68P56378 58 aa5.28□□□□□ -1.56
SNRNP40-202ENST00000373720 MOBPQ13875 183 aa5.28□□□□□ -1.56
SNRNP40-202ENST00000373720 Q5XG85 94 aa5.28□□□□□ -1.56
SNRNP40-202ENST00000373720 A0A0U1RQV1 116 aa5.27□□□□□ -1.57
SNRNP40-202ENST00000373720 FAM236DA0A1B0GTK5 79 aa5.27□□□□□ -1.57
SNRNP40-202ENST00000373720 H7BZZ5 65 aa5.27□□□□□ -1.57
SNRNP40-202ENST00000373720 CDK2AP2O75956 126 aa5.27□□□□□ -1.57
SNRNP40-202ENST00000373720 FAM236CP0DP71 79 aa5.27□□□□□ -1.57
SNRNP40-202ENST00000373720 TENM2Q9NT68 2774 aa5.27□□□□□ -1.57
SNRNP40-202ENST00000373720 PLECQ15149 4684 aaKnown RBP5.27□□□□□ -1.57
SNRNP40-202ENST00000373720 PRKDCP78527 4128 aaKnown RBP5.26□□□□□ -1.57
SNRNP40-202ENST00000373720 SERP1Q9Y6X1 66 aa5.26□□□□□ -1.57
SNRNP40-202ENST00000373720 KRTAP29-1A8MX34 341 aaPredicted RBP5.25□□□□□ -1.57
SNRNP40-202ENST00000373720 CASC2Q6XLA1 102 aa5.25□□□□□ -1.57
SNRNP40-202ENST00000373720 Q8N9L7 120 aa5.25□□□□□ -1.57
SNRNP40-202ENST00000373720 CIRBP-AS1Q8TBR5 109 aa5.24□□□□□ -1.57
SNRNP40-202ENST00000373720 IGLV9-49A0A0B4J1Y8 123 aa5.23□□□□□ -1.57
SNRNP40-202ENST00000373720 hDV103S1A0JD37 113 aa5.23□□□□□ -1.57
SNRNP40-202ENST00000373720 KRTAP9-8Q9BYQ0 159 aa5.23□□□□□ -1.57
SNRNP40-202ENST00000373720 C8orf87E5RJ46 101 aa5.22□□□□□ -1.57
SNRNP40-202ENST00000373720 KRTAP10-2P60368 255 aa5.22□□□□□ -1.57
SNRNP40-202ENST00000373720 LIMD2Q9BT23 127 aa5.21□□□□□ -1.58
SNRNP40-202ENST00000373720 DNAH6Q9C0G6 4158 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms