RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 RPL37AP8A6NKH3 93 aa6.79□□□□□ -1.32
TRERF1-203ENST00000372917 HRES1P13985 223 aa6.79□□□□□ -1.32
TRERF1-203ENST00000372917 ASB16-AS1Q495Z4 193 aa6.79□□□□□ -1.32
TRERF1-203ENST00000372917 A0A087WSZ3 146 aa6.78□□□□□ -1.32
TRERF1-203ENST00000372917 UBR5O95071 2799 aaPredicted RBP6.78□□□□□ -1.32
TRERF1-203ENST00000372917 SPRR4Q96PI1 79 aa6.78□□□□□ -1.32
TRERF1-203ENST00000372917 LELP1Q5T871 98 aa6.78□□□□□ -1.32
TRERF1-203ENST00000372917 CSNK1G2-AS1Q8NCQ2 148 aa6.78□□□□□ -1.32
TRERF1-203ENST00000372917 CELSR2Q9HCU4 2923 aa6.76□□□□□ -1.33
TRERF1-203ENST00000372917 A0A096LNI7 61 aa6.76□□□□□ -1.33
TRERF1-203ENST00000372917 INAFM1C9JVW0 142 aa6.76□□□□□ -1.33
TRERF1-203ENST00000372917 CSMD2Q7Z408 3487 aa6.76□□□□□ -1.33
TRERF1-203ENST00000372917 SETXQ7Z333 2677 aaKnown RBP6.75□□□□□ -1.33
TRERF1-203ENST00000372917 ROMO1P60602 79 aa6.75□□□□□ -1.33
TRERF1-203ENST00000372917 IGKV2-24A0A0C4DH68 120 aa6.75□□□□□ -1.33
TRERF1-203ENST00000372917 REG3GQ6UW15 175 aa6.75□□□□□ -1.33
TRERF1-203ENST00000372917 KRTAP29-1A8MX34 341 aaPredicted RBP6.74□□□□□ -1.33
TRERF1-203ENST00000372917 MGAM2Q2M2H8 2515 aa6.74□□□□□ -1.33
TRERF1-203ENST00000372917 MXRA5Q9NR99 2828 aa6.73□□□□□ -1.33
TRERF1-203ENST00000372917 IGLV5-37A0A075B6J1 123 aa6.73□□□□□ -1.33
TRERF1-203ENST00000372917 MIR22HGQ0VDD5 57 aa6.73□□□□□ -1.33
TRERF1-203ENST00000372917 C19orf73Q9NVV2 129 aa6.73□□□□□ -1.33
TRERF1-203ENST00000372917 X6R8D5 127 aa6.73□□□□□ -1.33
TRERF1-203ENST00000372917 DHRS4-AS1Q9P1J3 65 aa6.72□□□□□ -1.33
TRERF1-203ENST00000372917 A0A1B0GU69 56 aa6.71□□□□□ -1.33
TRERF1-203ENST00000372917 BSNQ9UPA5 3926 aa6.71□□□□□ -1.34
TRERF1-203ENST00000372917 DEFB131BA0A096LNP1 70 aa6.71□□□□□ -1.34
TRERF1-203ENST00000372917 UBE2DNLQ8IWF7 75 aa6.71□□□□□ -1.34
TRERF1-203ENST00000372917 APCP25054 2843 aa6.71□□□□□ -1.34
TRERF1-203ENST00000372917 TNP2Q05952 138 aa6.7□□□□□ -1.34
TRERF1-203ENST00000372917 GVQW2A0A096LPI5 108 aaPredicted RBP6.69□□□□□ -1.34
TRERF1-203ENST00000372917 TEP1Q99973 2627 aaKnown RBP6.69□□□□□ -1.34
TRERF1-203ENST00000372917 EGFEM1PQ0D2K5 195 aa6.68□□□□□ -1.34
TRERF1-203ENST00000372917 NOTCH1P46531 2555 aa6.68□□□□□ -1.34
TRERF1-203ENST00000372917 MAST4O15021 2626 aa6.67□□□□□ -1.34
TRERF1-203ENST00000372917 Q6ZRX8 168 aa6.67□□□□□ -1.34
TRERF1-203ENST00000372917 SPATA8Q6RVD6 105 aa6.67□□□□□ -1.34
TRERF1-203ENST00000372917 IGFL1Q6UW32 110 aa6.67□□□□□ -1.34
TRERF1-203ENST00000372917 A8MWP4 228 aa6.66□□□□□ -1.34
TRERF1-203ENST00000372917 UQCR11O14957 56 aa6.65□□□□□ -1.35
TRERF1-203ENST00000372917 A0A087X002 238 aa6.64□□□□□ -1.35
TRERF1-203ENST00000372917 ITPR2Q14571 2701 aa6.64□□□□□ -1.35
TRERF1-203ENST00000372917 NBEAL1Q6ZS30 2694 aa6.63□□□□□ -1.35
TRERF1-203ENST00000372917 PRR34Q9NV39 138 aa6.62□□□□□ -1.35
TRERF1-203ENST00000372917 NIPBLQ6KC79 2804 aaeCLIP6.62□□□□□ -1.35
TRERF1-203ENST00000372917 IGLV8-61A0A075B6I0 122 aa6.61□□□□□ -1.35
TRERF1-203ENST00000372917 CDK2AP2O75956 126 aa6.61□□□□□ -1.35
TRERF1-203ENST00000372917 OTOGQ6ZRI0 2925 aa6.61□□□□□ -1.35
TRERF1-203ENST00000372917 BAHCC1Q9P281 2608 aa6.61□□□□□ -1.35
TRERF1-203ENST00000372917 HIVEP1P15822 2718 aa6.6□□□□□ -1.35
TRERF1-203ENST00000372917 COL6A5A8TX70 2615 aa6.59□□□□□ -1.35
TRERF1-203ENST00000372917 ZNF861PO60384 105 aa6.58□□□□□ -1.36
TRERF1-203ENST00000372917 MMP24-AS1A0A0U1RRL7 71 aa6.57□□□□□ -1.36
TRERF1-203ENST00000372917 KRTAP25-1Q3LHN0 102 aa6.57□□□□□ -1.36
TRERF1-203ENST00000372917 ACYP2P14621 99 aa6.57□□□□□ -1.36
TRERF1-203ENST00000372917 PRLHP81277 87 aa6.57□□□□□ -1.36
TRERF1-203ENST00000372917 TP53AIP1Q9HCN2 124 aa6.57□□□□□ -1.36
TRERF1-203ENST00000372917 P0C880 135 aa6.57□□□□□ -1.36
TRERF1-203ENST00000372917 KRTAP10-3P60369 221 aa6.56□□□□□ -1.36
TRERF1-203ENST00000372917 FLG2Q5D862 2391 aaPredicted RBP6.55□□□□□ -1.36
TRERF1-203ENST00000372917 FAM168BA1KXE4 195 aa6.55□□□□□ -1.36
TRERF1-203ENST00000372917 KRTAP1-3Q8IUG1 177 aa6.54□□□□□ -1.36
TRERF1-203ENST00000372917 STAB1Q9NY15 2570 aa6.54□□□□□ -1.36
TRERF1-203ENST00000372917 DNAH10OSP0CZ25 163 aa6.54□□□□□ -1.36
TRERF1-203ENST00000372917 CRIPTQ9P021 101 aa6.53□□□□□ -1.36
TRERF1-203ENST00000372917 KMT2BQ9UMN6 2715 aaPredicted RBP6.52□□□□□ -1.37
TRERF1-203ENST00000372917 NBPF19A0A087WUL8 3843 aa6.51□□□□□ -1.37
TRERF1-203ENST00000372917 C15orf56Q8N910 161 aa6.5□□□□□ -1.37
TRERF1-203ENST00000372917 LINC00472Q9H8W2 130 aa6.5□□□□□ -1.37
TRERF1-203ENST00000372917 KRTAP4-16G5E9R7 235 aaPredicted RBP6.5□□□□□ -1.37
TRERF1-203ENST00000372917 IGLV9-49A0A0B4J1Y8 123 aa6.49□□□□□ -1.37
TRERF1-203ENST00000372917 A8MUU9 505 aa6.49□□□□□ -1.37
TRERF1-203ENST00000372917 KRTAP16-1A8MUX0 517 aa6.48□□□□□ -1.37
TRERF1-203ENST00000372917 K7EIL1 84 aa6.48□□□□□ -1.37
TRERF1-203ENST00000372917 LINC01556Q5JQF7 62 aa6.48□□□□□ -1.37
TRERF1-203ENST00000372917 NDUFAF8A1L188 74 aa6.47□□□□□ -1.37
TRERF1-203ENST00000372917 SPINK6Q6UWN8 80 aa6.47□□□□□ -1.37
TRERF1-203ENST00000372917 H3BNG1 76 aa6.46□□□□□ -1.37
TRERF1-203ENST00000372917 SPINT4Q6UDR6 99 aa6.46□□□□□ -1.37
TRERF1-203ENST00000372917 NSD1Q96L73 2696 aaPredicted RBP6.46□□□□□ -1.37
TRERF1-203ENST00000372917 IGLV5-52A0A0A0MRZ9 124 aa6.46□□□□□ -1.38
TRERF1-203ENST00000372917 KRTAP1-1Q07627 177 aa6.46□□□□□ -1.38
TRERF1-203ENST00000372917 LINC00483Q53H64 154 aa6.46□□□□□ -1.38
TRERF1-203ENST00000372917 VPS13CQ709C8 3753 aa6.46□□□□□ -1.38
TRERF1-203ENST00000372917 SPRR1AP35321 89 aa6.45□□□□□ -1.38
TRERF1-203ENST00000372917 C8orf17Q9NRJ1 99 aa6.45□□□□□ -1.38
TRERF1-203ENST00000372917 CASC10Q5T4H9 136 aa6.44□□□□□ -1.38
TRERF1-203ENST00000372917 SSBP3-AS1Q7Z2R9 100 aa6.43□□□□□ -1.38
TRERF1-203ENST00000372917 PLA2G2DQ9UNK4 145 aa6.43□□□□□ -1.38
TRERF1-203ENST00000372917 KRTAP26-1Q6PEX3 210 aa6.43□□□□□ -1.38
TRERF1-203ENST00000372917 CHTF8P0CG12 524 aa6.41□□□□□ -1.38
TRERF1-203ENST00000372917 TLX1NBP0CAT3 122 aa6.41□□□□□ -1.38
TRERF1-203ENST00000372917 DMAC1Q96GE9 116 aa6.41□□□□□ -1.38
TRERF1-203ENST00000372917 MRPL34Q9BQ48 92 aaKnown RBP6.41□□□□□ -1.38
TRERF1-203ENST00000372917 AKAP9Q99996 3911 aa6.39□□□□□ -1.39
TRERF1-203ENST00000372917 KRTAP10-11P60412 298 aa6.37□□□□□ -1.39
TRERF1-203ENST00000372917 C14orf177Q52M58 125 aa6.37□□□□□ -1.39
TRERF1-203ENST00000372917 LINC00304Q8N9R0 145 aa6.36□□□□□ -1.39
TRERF1-203ENST00000372917 C20orf166-AS1Q96NR2 134 aa6.36□□□□□ -1.39
TRERF1-203ENST00000372917 IGLV7-43P04211 117 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms