RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 PLA2G2DQ9UNK4 145 aa9.41□□□□□ -0.9
COL9A2-202ENST00000372748 MDFIQ99750 246 aa9.39□□□□□ -0.91
COL9A2-202ENST00000372748 IGFL1Q6UW32 110 aa9.38□□□□□ -0.91
COL9A2-202ENST00000372748 IGLV5-37A0A075B6J1 123 aa9.38□□□□□ -0.91
COL9A2-202ENST00000372748 RPL37AP61513 92 aaKnown RBP9.38□□□□□ -0.91
COL9A2-202ENST00000372748 SRRM2Q9UQ35 2752 aaKnown RBP9.38□□□□□ -0.91
COL9A2-202ENST00000372748 DNAH3Q8TD57 4116 aa9.38□□□□□ -0.91
COL9A2-202ENST00000372748 A0A087WSZ3 146 aa9.38□□□□□ -0.91
COL9A2-202ENST00000372748 REG3GQ6UW15 175 aa9.38□□□□□ -0.91
COL9A2-202ENST00000372748 PRLHP81277 87 aa9.37□□□□□ -0.91
COL9A2-202ENST00000372748 Q1T7F1 81 aa9.37□□□□□ -0.91
COL9A2-202ENST00000372748 TRAV22A0A0B4J277 110 aa9.36□□□□□ -0.91
COL9A2-202ENST00000372748 LINC00208Q96KT6 92 aa9.34□□□□□ -0.91
COL9A2-202ENST00000372748 LYSTQ99698 3801 aa9.33□□□□□ -0.92
COL9A2-202ENST00000372748 IGKV2-24A0A0C4DH68 120 aa9.33□□□□□ -0.92
COL9A2-202ENST00000372748 CYP4F30PQ9H0H9 118 aa9.32□□□□□ -0.92
COL9A2-202ENST00000372748 DNAH1Q9P2D7 4330 aa9.32□□□□□ -0.92
COL9A2-202ENST00000372748 MP68P56378 58 aa9.32□□□□□ -0.92
COL9A2-202ENST00000372748 HUWE1Q7Z6Z7 4374 aaKnown RBP9.32□□□□□ -0.92
COL9A2-202ENST00000372748 DNHD1Q96M86 4753 aa9.31□□□□□ -0.92
COL9A2-202ENST00000372748 A8MUN3 132 aa9.3□□□□□ -0.92
COL9A2-202ENST00000372748 PRR15Q8IV56 129 aa9.29□□□□□ -0.92
COL9A2-202ENST00000372748 DNAH10Q8IVF4 4471 aa9.29□□□□□ -0.92
COL9A2-202ENST00000372748 NDUFB1O75438 58 aa9.29□□□□□ -0.92
COL9A2-202ENST00000372748 K7EIL1 84 aa9.28□□□□□ -0.92
COL9A2-202ENST00000372748 A8MU10 97 aa9.28□□□□□ -0.92
COL9A2-202ENST00000372748 B9D2Q9BPU9 175 aa9.27□□□□□ -0.93
COL9A2-202ENST00000372748 A0A096LNI7 61 aa9.26□□□□□ -0.93
COL9A2-202ENST00000372748 CSMD3Q7Z407 3707 aa9.26□□□□□ -0.93
COL9A2-202ENST00000372748 STAB2Q8WWQ8 2551 aa9.25□□□□□ -0.93
COL9A2-202ENST00000372748 H0Y9P7 68 aa9.25□□□□□ -0.93
COL9A2-202ENST00000372748 UBE2AP49459 152 aa9.25□□□□□ -0.93
COL9A2-202ENST00000372748 KRTAP29-1A8MX34 341 aaPredicted RBP9.25□□□□□ -0.93
COL9A2-202ENST00000372748 CASC2Q6XLA1 102 aa9.25□□□□□ -0.93
COL9A2-202ENST00000372748 KRTAP1-5Q9BYS1 174 aa9.24□□□□□ -0.93
COL9A2-202ENST00000372748 COL7A1Q02388 2944 aa9.23□□□□□ -0.93
COL9A2-202ENST00000372748 CNBPP62633 177 aaKnown RBP9.22□□□□□ -0.93
COL9A2-202ENST00000372748 IGLV8-61A0A075B6I0 122 aa9.21□□□□□ -0.94
COL9A2-202ENST00000372748 PMAIP1Q13794 54 aa9.21□□□□□ -0.94
COL9A2-202ENST00000372748 KRTAP11-1Q8IUC1 163 aa9.21□□□□□ -0.94
COL9A2-202ENST00000372748 Q5VV11 94 aa9.2□□□□□ -0.94
COL9A2-202ENST00000372748 TENM2Q9NT68 2774 aa9.2□□□□□ -0.94
COL9A2-202ENST00000372748 DNAH9Q9NYC9 4486 aa9.19□□□□□ -0.94
COL9A2-202ENST00000372748 CHTF8P0CG12 524 aa9.18□□□□□ -0.94
COL9A2-202ENST00000372748 C16orf90A8MZG2 172 aa9.18□□□□□ -0.94
COL9A2-202ENST00000372748 PHF5AQ7RTV0 110 aaKnown RBP9.18□□□□□ -0.94
COL9A2-202ENST00000372748 H0Y9J4 135 aa9.17□□□□□ -0.94
COL9A2-202ENST00000372748 A8MWP4 228 aa9.16□□□□□ -0.94
COL9A2-202ENST00000372748 CHKB-CPT1BH3BT56 60 aa9.16□□□□□ -0.94
COL9A2-202ENST00000372748 Q8N9P0 234 aaPredicted RBP9.16□□□□□ -0.94
COL9A2-202ENST00000372748 LINC00472Q9H8W2 130 aa9.15□□□□□ -0.94
COL9A2-202ENST00000372748 UBE2DNLQ8IWF7 75 aa9.15□□□□□ -0.94
COL9A2-202ENST00000372748 PRR15LQ9BU68 103 aa9.15□□□□□ -0.94
COL9A2-202ENST00000372748 SPANXA2-OT1Q8N9U9 137 aa9.14□□□□□ -0.95
COL9A2-202ENST00000372748 DNAH7Q8WXX0 4024 aa9.13□□□□□ -0.95
COL9A2-202ENST00000372748 C9orf163Q8N9P6 203 aa9.12□□□□□ -0.95
COL9A2-202ENST00000372748 MEGF8Q7Z7M0 2845 aa9.11□□□□□ -0.95
COL9A2-202ENST00000372748 H3BPC8 53 aa9.1□□□□□ -0.95
COL9A2-202ENST00000372748 PCOTHQ58A44 107 aa9.1□□□□□ -0.95
COL9A2-202ENST00000372748 TGP01266 2768 aa9.1□□□□□ -0.95
COL9A2-202ENST00000372748 LIMD2Q9BT23 127 aa9.09□□□□□ -0.95
COL9A2-202ENST00000372748 MMP24-AS1A0A0U1RRL7 71 aa9.09□□□□□ -0.95
COL9A2-202ENST00000372748 COA5Q86WW8 74 aa9.08□□□□□ -0.96
COL9A2-202ENST00000372748 SPTSSBQ8NFR3 76 aa9.08□□□□□ -0.96
COL9A2-202ENST00000372748 PRKDCP78527 4128 aaKnown RBP9.07□□□□□ -0.96
COL9A2-202ENST00000372748 APLNQ9ULZ1 77 aa9.07□□□□□ -0.96
COL9A2-202ENST00000372748 SPRR1BP22528 89 aa9.06□□□□□ -0.96
COL9A2-202ENST00000372748 IGLV9-49A0A0B4J1Y8 123 aa9.03□□□□□ -0.96
COL9A2-202ENST00000372748 A6NED7 52 aa9.03□□□□□ -0.96
COL9A2-202ENST00000372748 LCA10Q71F78 164 aa9.03□□□□□ -0.96
COL9A2-202ENST00000372748 IGLV7-46A0A075B6I9 117 aa9.02□□□□□ -0.96
COL9A2-202ENST00000372748 CD164Q04900 197 aa9.02□□□□□ -0.97
COL9A2-202ENST00000372748 PANO1I0J062 215 aa9.01□□□□□ -0.97
COL9A2-202ENST00000372748 PLECQ15149 4684 aaKnown RBP9.01□□□□□ -0.97
COL9A2-202ENST00000372748 SPAG11AQ6PDA7 123 aa9□□□□□ -0.97
COL9A2-202ENST00000372748 NDUFS5O43920 106 aa8.99□□□□□ -0.97
COL9A2-202ENST00000372748 C14orf177Q52M58 125 aa8.99□□□□□ -0.97
COL9A2-202ENST00000372748 Q75L30 129 aa8.98□□□□□ -0.97
COL9A2-202ENST00000372748 Q96NJ1 140 aa8.98□□□□□ -0.97
COL9A2-202ENST00000372748 IGHV6-1A0A0B4J1U7 121 aa8.97□□□□□ -0.97
COL9A2-202ENST00000372748 LOC101927531A0A1B0GV80 90 aa8.96□□□□□ -0.98
COL9A2-202ENST00000372748 NBDYA0A0U1RRE5 68 aa8.95□□□□□ -0.98
COL9A2-202ENST00000372748 FBN3Q75N90 2809 aa8.95□□□□□ -0.98
COL9A2-202ENST00000372748 C8orf17Q9NRJ1 99 aa8.94□□□□□ -0.98
COL9A2-202ENST00000372748 MOBPQ13875 183 aa8.93□□□□□ -0.98
COL9A2-202ENST00000372748 DYNC2H1Q8NCM8 4307 aaKnown RBP8.93□□□□□ -0.98
COL9A2-202ENST00000372748 KRTAP13-1Q8IUC0 172 aa8.92□□□□□ -0.98
COL9A2-202ENST00000372748 TP53AIP1Q9HCN2 124 aa8.92□□□□□ -0.98
COL9A2-202ENST00000372748 ASB16-AS1Q495Z4 193 aa8.91□□□□□ -0.98
COL9A2-202ENST00000372748 ATP11AUNQ6ZP68 121 aa8.91□□□□□ -0.98
COL9A2-202ENST00000372748 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.91□□□□□ -0.98
COL9A2-202ENST00000372748 A0A087X002 238 aa8.91□□□□□ -0.98
COL9A2-202ENST00000372748 NOTCH2NLQ7Z3S9 236 aa8.91□□□□□ -0.98
COL9A2-202ENST00000372748 KTN1-AS1Q86SY8 53 aa8.91□□□□□ -0.98
COL9A2-202ENST00000372748 Q6ZRN7 208 aaPredicted RBP8.9□□□□□ -0.98
COL9A2-202ENST00000372748 ANAPC11Q9NYG5 84 aa8.9□□□□□ -0.98
COL9A2-202ENST00000372748 HRES1P13985 223 aa8.9□□□□□ -0.99
COL9A2-202ENST00000372748 Q6ZR54 194 aa8.9□□□□□ -0.99
COL9A2-202ENST00000372748 C4orf48Q5BLP8 95 aa8.89□□□□□ -0.99
COL9A2-202ENST00000372748 A0A1B0GVX0 72 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 285.7 ms