RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 PKD1L1Q8TDX9 2849 aa11.73□□□□□ -0.53
MMP9-201ENST00000372330 KRTAP4-16G5E9R7 235 aaPredicted RBP11.73□□□□□ -0.53
MMP9-201ENST00000372330 WFDC13Q8IUB5 93 aa11.73□□□□□ -0.53
MMP9-201ENST00000372330 OXLD1Q5BKU9 147 aa11.72□□□□□ -0.53
MMP9-201ENST00000372330 KRTAP26-1Q6PEX3 210 aa11.72□□□□□ -0.53
MMP9-201ENST00000372330 C15orf56Q8N910 161 aa11.72□□□□□ -0.53
MMP9-201ENST00000372330 KRTAP29-1A8MX34 341 aaPredicted RBP11.71□□□□□ -0.54
MMP9-201ENST00000372330 C9orf163Q8N9P6 203 aa11.71□□□□□ -0.54
MMP9-201ENST00000372330 SPRR1AP35321 89 aa11.7□□□□□ -0.54
MMP9-201ENST00000372330 PLA2G2DQ9UNK4 145 aa11.7□□□□□ -0.54
MMP9-201ENST00000372330 WFDC10BQ8IUB3 73 aa11.69□□□□□ -0.54
MMP9-201ENST00000372330 H3BNG1 76 aa11.69□□□□□ -0.54
MMP9-201ENST00000372330 SERTAD4-AS1Q5TG53 156 aa11.68□□□□□ -0.54
MMP9-201ENST00000372330 TENM3Q9P273 2699 aa11.68□□□□□ -0.54
MMP9-201ENST00000372330 DEFB116Q30KQ4 102 aa11.68□□□□□ -0.54
MMP9-201ENST00000372330 COA5Q86WW8 74 aa11.68□□□□□ -0.54
MMP9-201ENST00000372330 KRTAP10-11P60412 298 aa11.67□□□□□ -0.54
MMP9-201ENST00000372330 CMYA5Q8N3K9 4069 aa11.67□□□□□ -0.54
MMP9-201ENST00000372330 ANK2Q01484 3957 aa11.67□□□□□ -0.54
MMP9-201ENST00000372330 STAB1Q9NY15 2570 aa11.67□□□□□ -0.54
MMP9-201ENST00000372330 IGLV1-50A0A075B6I6 118 aa11.66□□□□□ -0.54
MMP9-201ENST00000372330 LINC00476Q8WZB0 136 aa11.65□□□□□ -0.54
MMP9-201ENST00000372330 IGLV7-46A0A075B6I9 117 aa11.65□□□□□ -0.54
MMP9-201ENST00000372330 CASC2Q6XLA1 102 aa11.64□□□□□ -0.55
MMP9-201ENST00000372330 LINC01558Q9Y6Z2 57 aa11.63□□□□□ -0.55
MMP9-201ENST00000372330 IGLV5-37A0A075B6J1 123 aa11.63□□□□□ -0.55
MMP9-201ENST00000372330 TLX1NBP0CAT3 122 aa11.61□□□□□ -0.55
MMP9-201ENST00000372330 MOBPQ13875 183 aa11.61□□□□□ -0.55
MMP9-201ENST00000372330 RPL37AP8A6NKH3 93 aa11.6□□□□□ -0.55
MMP9-201ENST00000372330 IGFL1Q6UW32 110 aa11.59□□□□□ -0.55
MMP9-201ENST00000372330 PLAC8Q9NZF1 115 aa11.59□□□□□ -0.55
MMP9-201ENST00000372330 BAHCC1Q9P281 2608 aa11.59□□□□□ -0.55
MMP9-201ENST00000372330 MAST4O15021 2626 aa11.58□□□□□ -0.56
MMP9-201ENST00000372330 C4orf48Q5BLP8 95 aa11.58□□□□□ -0.56
MMP9-201ENST00000372330 A0A087WSZ3 146 aa11.57□□□□□ -0.56
MMP9-201ENST00000372330 IGLV8-61A0A075B6I0 122 aa11.56□□□□□ -0.56
MMP9-201ENST00000372330 DEFB131BA0A096LNP1 70 aa11.53□□□□□ -0.56
MMP9-201ENST00000372330 RPL37AP61513 92 aaKnown RBP11.53□□□□□ -0.56
MMP9-201ENST00000372330 CNBPP62633 177 aaKnown RBP11.53□□□□□ -0.56
MMP9-201ENST00000372330 C11orf45Q8TAV5 145 aa11.53□□□□□ -0.56
MMP9-201ENST00000372330 NOTCH1P46531 2555 aa11.52□□□□□ -0.56
MMP9-201ENST00000372330 LINC01556Q5JQF7 62 aa11.52□□□□□ -0.57
MMP9-201ENST00000372330 A8MWP4 228 aa11.52□□□□□ -0.57
MMP9-201ENST00000372330 C8orf87E5RJ46 101 aa11.52□□□□□ -0.57
MMP9-201ENST00000372330 DNAH3Q8TD57 4116 aa11.51□□□□□ -0.57
MMP9-201ENST00000372330 COL6A5A8TX70 2615 aa11.5□□□□□ -0.57
MMP9-201ENST00000372330 SPAG11AQ6PDA7 123 aa11.5□□□□□ -0.57
MMP9-201ENST00000372330 A0A0G2JQZ4 141 aa11.47□□□□□ -0.57
MMP9-201ENST00000372330 A0A1W2PNN7 141 aa11.47□□□□□ -0.57
MMP9-201ENST00000372330 FAM168BA1KXE4 195 aa11.47□□□□□ -0.57
MMP9-201ENST00000372330 REG3GQ6UW15 175 aa11.47□□□□□ -0.57
MMP9-201ENST00000372330 DNAH10OSP0CZ25 163 aa11.43□□□□□ -0.58
MMP9-201ENST00000372330 SPINK7P58062 85 aa11.43□□□□□ -0.58
MMP9-201ENST00000372330 LINC00472Q9H8W2 130 aa11.43□□□□□ -0.58
MMP9-201ENST00000372330 KRTAP7-1Q8IUC3 87 aa11.43□□□□□ -0.58
MMP9-201ENST00000372330 TP53AIP1Q9HCN2 124 aa11.43□□□□□ -0.58
MMP9-201ENST00000372330 NBEAL1Q6ZS30 2694 aa11.42□□□□□ -0.58
MMP9-201ENST00000372330 PCOTHQ58A44 107 aa11.38□□□□□ -0.59
MMP9-201ENST00000372330 MMP24-AS1A0A0U1RRL7 71 aa11.37□□□□□ -0.59
MMP9-201ENST00000372330 LINC00313P59037 77 aa11.37□□□□□ -0.59
MMP9-201ENST00000372330 ASB16-AS1Q495Z4 193 aa11.36□□□□□ -0.59
MMP9-201ENST00000372330 Q6ZR54 194 aa11.34□□□□□ -0.59
MMP9-201ENST00000372330 HRES1P13985 223 aa11.34□□□□□ -0.59
MMP9-201ENST00000372330 H0Y9J4 135 aa11.33□□□□□ -0.6
MMP9-201ENST00000372330 A0A087X002 238 aa11.32□□□□□ -0.6
MMP9-201ENST00000372330 K7EIL1 84 aa11.32□□□□□ -0.6
MMP9-201ENST00000372330 PLA2G1BP04054 148 aaKnown RBP11.32□□□□□ -0.6
MMP9-201ENST00000372330 HUWE1Q7Z6Z7 4374 aaKnown RBP11.3□□□□□ -0.6
MMP9-201ENST00000372330 IGKV2-24A0A0C4DH68 120 aa11.29□□□□□ -0.6
MMP9-201ENST00000372330 LINC01554Q52M75 96 aa11.29□□□□□ -0.6
MMP9-201ENST00000372330 CASC10Q5T4H9 136 aa11.29□□□□□ -0.6
MMP9-201ENST00000372330 SPRR1BP22528 89 aa11.28□□□□□ -0.6
MMP9-201ENST00000372330 DNAH1Q9P2D7 4330 aa11.27□□□□□ -0.61
MMP9-201ENST00000372330 PRLHP81277 87 aa11.27□□□□□ -0.61
MMP9-201ENST00000372330 MGAM2Q2M2H8 2515 aa11.26□□□□□ -0.61
MMP9-201ENST00000372330 PRAC1Q96KF2 57 aa11.23□□□□□ -0.61
MMP9-201ENST00000372330 MDFIQ99750 246 aa11.22□□□□□ -0.61
MMP9-201ENST00000372330 COL7A1Q02388 2944 aa11.21□□□□□ -0.61
MMP9-201ENST00000372330 LYSTQ99698 3801 aa11.18□□□□□ -0.62
MMP9-201ENST00000372330 H3BS24 57 aa11.18□□□□□ -0.62
MMP9-201ENST00000372330 C8orf17Q9NRJ1 99 aa11.17□□□□□ -0.62
MMP9-201ENST00000372330 STAB2Q8WWQ8 2551 aa11.16□□□□□ -0.62
MMP9-201ENST00000372330 DNAH10Q8IVF4 4471 aa11.15□□□□□ -0.63
MMP9-201ENST00000372330 PRR26Q8N8Z3 221 aa11.13□□□□□ -0.63
MMP9-201ENST00000372330 RTL8CO15255 209 aa11.13□□□□□ -0.63
MMP9-201ENST00000372330 ADM2Q7Z4H4 148 aa11.12□□□□□ -0.63
MMP9-201ENST00000372330 ACYP2P14621 99 aa11.1□□□□□ -0.63
MMP9-201ENST00000372330 Q96NJ1 140 aa11.1□□□□□ -0.63
MMP9-201ENST00000372330 SPATA8Q6RVD6 105 aa11.1□□□□□ -0.63
MMP9-201ENST00000372330 DNAH9Q9NYC9 4486 aa11.1□□□□□ -0.63
MMP9-201ENST00000372330 MRPL34Q9BQ48 92 aaKnown RBP11.09□□□□□ -0.63
MMP9-201ENST00000372330 KRTAP1-5Q9BYS1 174 aa11.09□□□□□ -0.63
MMP9-201ENST00000372330 A0A096LNI7 61 aa11.06□□□□□ -0.64
MMP9-201ENST00000372330 A0A1B0GVX0 72 aa11.06□□□□□ -0.64
MMP9-201ENST00000372330 TENM2Q9NT68 2774 aa11.05□□□□□ -0.64
MMP9-201ENST00000372330 IGHV6-1A0A0B4J1U7 121 aa11.02□□□□□ -0.65
MMP9-201ENST00000372330 A0A1B0GU69 56 aa11.02□□□□□ -0.65
MMP9-201ENST00000372330 CDK2AP2O75956 126 aa11.02□□□□□ -0.65
MMP9-201ENST00000372330 UBE2DNLQ8IWF7 75 aa11.01□□□□□ -0.65
MMP9-201ENST00000372330 CSMD3Q7Z407 3707 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms