RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 KIAA0087Q14695 138 aa5.76□□□□□ -1.49
ATG4A-203ENST00000372232 A0A1B0GW54 56 aa5.75□□□□□ -1.49
ATG4A-203ENST00000372232 PLAC8Q9NZF1 115 aa5.75□□□□□ -1.49
ATG4A-203ENST00000372232 COL6A5A8TX70 2615 aa5.75□□□□□ -1.49
ATG4A-203ENST00000372232 LINC01558Q9Y6Z2 57 aa5.74□□□□□ -1.49
ATG4A-203ENST00000372232 SPART-AS1P0CW21 52 aa5.73□□□□□ -1.49
ATG4A-203ENST00000372232 KRTAP24-1Q3LI83 254 aa5.73□□□□□ -1.49
ATG4A-203ENST00000372232 CLPSL2Q6UWE3 100 aa5.73□□□□□ -1.49
ATG4A-203ENST00000372232 MP68P56378 58 aa5.73□□□□□ -1.49
ATG4A-203ENST00000372232 ASB16-AS1Q495Z4 193 aa5.73□□□□□ -1.49
ATG4A-203ENST00000372232 CASC2Q6XLA1 102 aa5.72□□□□□ -1.49
ATG4A-203ENST00000372232 ANK2Q01484 3957 aa5.71□□□□□ -1.5
ATG4A-203ENST00000372232 STAB1Q9NY15 2570 aa5.71□□□□□ -1.5
ATG4A-203ENST00000372232 H3BPC8 53 aa5.7□□□□□ -1.5
ATG4A-203ENST00000372232 ANGP03950 147 aaKnown RBP5.7□□□□□ -1.5
ATG4A-203ENST00000372232 HTN3P15516 51 aa5.7□□□□□ -1.5
ATG4A-203ENST00000372232 DSCR10P59022 87 aa5.7□□□□□ -1.5
ATG4A-203ENST00000372232 REG3AQ06141 175 aa5.7□□□□□ -1.5
ATG4A-203ENST00000372232 COA5Q86WW8 74 aa5.7□□□□□ -1.5
ATG4A-203ENST00000372232 CHCHD10Q8WYQ3 142 aaPredicted RBP5.7□□□□□ -1.5
ATG4A-203ENST00000372232 IGLV10-54A0A075B6I4 117 aa5.69□□□□□ -1.5
ATG4A-203ENST00000372232 A0A087X002 238 aa5.69□□□□□ -1.5
ATG4A-203ENST00000372232 CNBPP62633 177 aaKnown RBP5.69□□□□□ -1.5
ATG4A-203ENST00000372232 LELP1Q5T871 98 aa5.69□□□□□ -1.5
ATG4A-203ENST00000372232 K7EQZ3 153 aa5.68□□□□□ -1.5
ATG4A-203ENST00000372232 SPINK7P58062 85 aa5.68□□□□□ -1.5
ATG4A-203ENST00000372232 KRTAP10-11P60412 298 aa5.68□□□□□ -1.5
ATG4A-203ENST00000372232 IGLV5-48A0A075B6I7 105 aa5.68□□□□□ -1.5
ATG4A-203ENST00000372232 C9orf163Q8N9P6 203 aa5.68□□□□□ -1.5
ATG4A-203ENST00000372232 PKD1L1Q8TDX9 2849 aa5.67□□□□□ -1.5
ATG4A-203ENST00000372232 SPAG11BQ08648 103 aa5.67□□□□□ -1.5
ATG4A-203ENST00000372232 CMYA5Q8N3K9 4069 aa5.67□□□□□ -1.5
ATG4A-203ENST00000372232 DNHD1Q96M86 4753 aa5.67□□□□□ -1.5
ATG4A-203ENST00000372232 ADM2Q7Z4H4 148 aa5.66□□□□□ -1.5
ATG4A-203ENST00000372232 KPRPQ5T749 579 aaPredicted RBP5.66□□□□□ -1.5
ATG4A-203ENST00000372232 EGFEM1PQ0D2K5 195 aa5.65□□□□□ -1.5
ATG4A-203ENST00000372232 REG3GQ6UW15 175 aa5.65□□□□□ -1.5
ATG4A-203ENST00000372232 PRR34Q9NV39 138 aa5.65□□□□□ -1.5
ATG4A-203ENST00000372232 A0A1W2PNM2 257 aa5.65□□□□□ -1.51
ATG4A-203ENST00000372232 A0A0J9YWU9 116 aa5.64□□□□□ -1.51
ATG4A-203ENST00000372232 IGLV7-46A0A075B6I9 117 aa5.63□□□□□ -1.51
ATG4A-203ENST00000372232 H3BNG1 76 aa5.63□□□□□ -1.51
ATG4A-203ENST00000372232 DNAH3Q8TD57 4116 aa5.63□□□□□ -1.51
ATG4A-203ENST00000372232 IGKV2D-24A0A075B6R9 120 aa5.63□□□□□ -1.51
ATG4A-203ENST00000372232 H0Y9P7 68 aa5.63□□□□□ -1.51
ATG4A-203ENST00000372232 SPRR4Q96PI1 79 aa5.63□□□□□ -1.51
ATG4A-203ENST00000372232 Q8NBF4 154 aa5.62□□□□□ -1.51
ATG4A-203ENST00000372232 SPAG11AQ6PDA7 123 aa5.62□□□□□ -1.51
ATG4A-203ENST00000372232 H0Y9J4 135 aa5.61□□□□□ -1.51
ATG4A-203ENST00000372232 UNQ6190/PRO20217Q6UXQ8 127 aa5.61□□□□□ -1.51
ATG4A-203ENST00000372232 WFDC10BQ8IUB3 73 aa5.61□□□□□ -1.51
ATG4A-203ENST00000372232 TENM3Q9P273 2699 aa5.61□□□□□ -1.51
ATG4A-203ENST00000372232 RTL8CO15255 209 aa5.6□□□□□ -1.51
ATG4A-203ENST00000372232 Q8N377 158 aa5.6□□□□□ -1.51
ATG4A-203ENST00000372232 GVQW2A0A096LPI5 108 aaPredicted RBP5.59□□□□□ -1.51
ATG4A-203ENST00000372232 KRTAP29-1A8MX34 341 aaPredicted RBP5.59□□□□□ -1.51
ATG4A-203ENST00000372232 RETNLBQ9BQ08 111 aa5.59□□□□□ -1.51
ATG4A-203ENST00000372232 NOTCH1P46531 2555 aa5.58□□□□□ -1.52
ATG4A-203ENST00000372232 C1orf137Q5JT78 98 aa5.58□□□□□ -1.52
ATG4A-203ENST00000372232 WFDC13Q8IUB5 93 aa5.58□□□□□ -1.52
ATG4A-203ENST00000372232 Q8N1X5 172 aa5.58□□□□□ -1.52
ATG4A-203ENST00000372232 KRTAP26-1Q6PEX3 210 aa5.57□□□□□ -1.52
ATG4A-203ENST00000372232 C6orf48Q9UBA6 75 aa5.57□□□□□ -1.52
ATG4A-203ENST00000372232 DEFB131BA0A096LNP1 70 aa5.57□□□□□ -1.52
ATG4A-203ENST00000372232 DEFB116Q30KQ4 102 aa5.57□□□□□ -1.52
ATG4A-203ENST00000372232 XAGE1AQ9HD64 81 aa5.56□□□□□ -1.52
ATG4A-203ENST00000372232 NBEAL1Q6ZS30 2694 aa5.55□□□□□ -1.52
ATG4A-203ENST00000372232 IGLV1-50A0A075B6I6 118 aa5.55□□□□□ -1.52
ATG4A-203ENST00000372232 ZNF706Q9Y5V0 76 aaPredicted RBP5.55□□□□□ -1.52
ATG4A-203ENST00000372232 MGAM2Q2M2H8 2515 aa5.55□□□□□ -1.52
ATG4A-203ENST00000372232 LINC01556Q5JQF7 62 aa5.54□□□□□ -1.52
ATG4A-203ENST00000372232 DEFB105AQ8NG35 78 aa5.54□□□□□ -1.52
ATG4A-203ENST00000372232 C7orf33Q8WU49 177 aa5.54□□□□□ -1.52
ATG4A-203ENST00000372232 C15orf56Q8N910 161 aa5.53□□□□□ -1.52
ATG4A-203ENST00000372232 CAMK2N2Q96S95 79 aa5.53□□□□□ -1.52
ATG4A-203ENST00000372232 DNAH10OSP0CZ25 163 aa5.51□□□□□ -1.53
ATG4A-203ENST00000372232 CSAG1Q6PB30 78 aa5.51□□□□□ -1.53
ATG4A-203ENST00000372232 Q6ZR54 194 aa5.51□□□□□ -1.53
ATG4A-203ENST00000372232 FBN3Q75N90 2809 aa5.5□□□□□ -1.53
ATG4A-203ENST00000372232 RPL37AP8A6NKH3 93 aa5.49□□□□□ -1.53
ATG4A-203ENST00000372232 K7EIL1 84 aa5.49□□□□□ -1.53
ATG4A-203ENST00000372232 HRES1P13985 223 aa5.49□□□□□ -1.53
ATG4A-203ENST00000372232 DHRS4-AS1Q9P1J3 65 aa5.49□□□□□ -1.53
ATG4A-203ENST00000372232 HUWE1Q7Z6Z7 4374 aaKnown RBP5.48□□□□□ -1.53
ATG4A-203ENST00000372232 SPATA8Q6RVD6 105 aa5.48□□□□□ -1.53
ATG4A-203ENST00000372232 C1orf134Q5TEV5 83 aa5.47□□□□□ -1.53
ATG4A-203ENST00000372232 IGHV6-1A0A0B4J1U7 121 aa5.47□□□□□ -1.53
ATG4A-203ENST00000372232 MEGF8Q7Z7M0 2845 aa5.46□□□□□ -1.53
ATG4A-203ENST00000372232 PCOTHQ58A44 107 aa5.46□□□□□ -1.54
ATG4A-203ENST00000372232 DNAH1Q9P2D7 4330 aa5.45□□□□□ -1.54
ATG4A-203ENST00000372232 Q6ZRX8 168 aa5.45□□□□□ -1.54
ATG4A-203ENST00000372232 RPL37AP61513 92 aaKnown RBP5.44□□□□□ -1.54
ATG4A-203ENST00000372232 ROMO1P60602 79 aa5.43□□□□□ -1.54
ATG4A-203ENST00000372232 CASC10Q5T4H9 136 aa5.43□□□□□ -1.54
ATG4A-203ENST00000372232 TLX1NBP0CAT3 122 aa5.42□□□□□ -1.54
ATG4A-203ENST00000372232 STAB2Q8WWQ8 2551 aa5.42□□□□□ -1.54
ATG4A-203ENST00000372232 KRTAP4-16G5E9R7 235 aaPredicted RBP5.42□□□□□ -1.54
ATG4A-203ENST00000372232 LYSTQ99698 3801 aa5.42□□□□□ -1.54
ATG4A-203ENST00000372232 A8MWP4 228 aa5.41□□□□□ -1.54
ATG4A-203ENST00000372232 IGFL1Q6UW32 110 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms