RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 NKAPP1Q8N9T2 125 aa7.32□□□□□ -1.24
SMARCA1-201ENST00000371121 TLX1NBP0CAT3 122 aa7.32□□□□□ -1.24
SMARCA1-201ENST00000371121 CNBPP62633 177 aaKnown RBP7.32□□□□□ -1.24
SMARCA1-201ENST00000371121 LINC00208Q96KT6 92 aa7.31□□□□□ -1.24
SMARCA1-201ENST00000371121 A6NN06 94 aa7.31□□□□□ -1.24
SMARCA1-201ENST00000371121 UBE2BP63146 152 aa7.3□□□□□ -1.24
SMARCA1-201ENST00000371121 HUWE1Q7Z6Z7 4374 aaKnown RBP7.3□□□□□ -1.24
SMARCA1-201ENST00000371121 SPANXA2-OT1Q8N9U9 137 aa7.3□□□□□ -1.24
SMARCA1-201ENST00000371121 SMR3AQ99954 134 aa7.29□□□□□ -1.24
SMARCA1-201ENST00000371121 RETNQ9HD89 108 aa7.29□□□□□ -1.24
SMARCA1-201ENST00000371121 RBM12B-AS1Q9P1G2 102 aa7.29□□□□□ -1.24
SMARCA1-201ENST00000371121 APOC4P55056 127 aa7.28□□□□□ -1.24
SMARCA1-201ENST00000371121 PLAC8Q9NZF1 115 aa7.28□□□□□ -1.24
SMARCA1-201ENST00000371121 NDUFB1O75438 58 aa7.28□□□□□ -1.24
SMARCA1-201ENST00000371121 KTN1-AS1Q86SY8 53 aa7.28□□□□□ -1.24
SMARCA1-201ENST00000371121 LOC101927531A0A1B0GV80 90 aa7.27□□□□□ -1.25
SMARCA1-201ENST00000371121 CHKB-CPT1BH3BT56 60 aa7.27□□□□□ -1.25
SMARCA1-201ENST00000371121 Q75L30 129 aa7.27□□□□□ -1.25
SMARCA1-201ENST00000371121 A0A087WSZ3 146 aa7.26□□□□□ -1.25
SMARCA1-201ENST00000371121 KRTAP11-1Q8IUC1 163 aa7.26□□□□□ -1.25
SMARCA1-201ENST00000371121 ATRQ13535 2644 aa7.26□□□□□ -1.25
SMARCA1-201ENST00000371121 IGLV8-61A0A075B6I0 122 aa7.26□□□□□ -1.25
SMARCA1-201ENST00000371121 PRR15LQ9BU68 103 aa7.26□□□□□ -1.25
SMARCA1-201ENST00000371121 H0Y9P7 68 aa7.26□□□□□ -1.25
SMARCA1-201ENST00000371121 NSD1Q96L73 2696 aaPredicted RBP7.26□□□□□ -1.25
SMARCA1-201ENST00000371121 LINC01556Q5JQF7 62 aa7.25□□□□□ -1.25
SMARCA1-201ENST00000371121 MRPL55Q7Z7F7 128 aaKnown RBP7.25□□□□□ -1.25
SMARCA1-201ENST00000371121 H3BNG1 76 aa7.24□□□□□ -1.25
SMARCA1-201ENST00000371121 DNAH8Q96JB1 4490 aa7.24□□□□□ -1.25
SMARCA1-201ENST00000371121 UBE2AP49459 152 aa7.24□□□□□ -1.25
SMARCA1-201ENST00000371121 LINC00472Q9H8W2 130 aa7.24□□□□□ -1.25
SMARCA1-201ENST00000371121 HECTD4Q9Y4D8 3996 aa7.23□□□□□ -1.25
SMARCA1-201ENST00000371121 LIMD2Q9BT23 127 aa7.23□□□□□ -1.25
SMARCA1-201ENST00000371121 COA5Q86WW8 74 aa7.23□□□□□ -1.25
SMARCA1-201ENST00000371121 PHF5AQ7RTV0 110 aaKnown RBP7.22□□□□□ -1.25
SMARCA1-201ENST00000371121 FLNBO75369 2602 aaKnown RBP7.22□□□□□ -1.25
SMARCA1-201ENST00000371121 PRLHP81277 87 aa7.21□□□□□ -1.25
SMARCA1-201ENST00000371121 MP68P56378 58 aa7.21□□□□□ -1.26
SMARCA1-201ENST00000371121 HELZ2Q9BYK8 2649 aaKnown RBP7.21□□□□□ -1.26
SMARCA1-201ENST00000371121 NOTCH2Q04721 2471 aa7.21□□□□□ -1.26
SMARCA1-201ENST00000371121 REG3GQ6UW15 175 aa7.2□□□□□ -1.26
SMARCA1-201ENST00000371121 IGLV7-46A0A075B6I9 117 aa7.2□□□□□ -1.26
SMARCA1-201ENST00000371121 CASC2Q6XLA1 102 aa7.2□□□□□ -1.26
SMARCA1-201ENST00000371121 ATP11AUNQ6ZP68 121 aa7.2□□□□□ -1.26
SMARCA1-201ENST00000371121 MMP24-AS1A0A0U1RRL7 71 aa7.19□□□□□ -1.26
SMARCA1-201ENST00000371121 MOBPQ13875 183 aa7.19□□□□□ -1.26
SMARCA1-201ENST00000371121 SPTSSBQ8NFR3 76 aa7.19□□□□□ -1.26
SMARCA1-201ENST00000371121 DNAH10OSP0CZ25 163 aa7.18□□□□□ -1.26
SMARCA1-201ENST00000371121 ASB16-AS1Q495Z4 193 aa7.18□□□□□ -1.26
SMARCA1-201ENST00000371121 HECTD1Q9ULT8 2610 aa7.18□□□□□ -1.26
SMARCA1-201ENST00000371121 SPINK7P58062 85 aa7.17□□□□□ -1.26
SMARCA1-201ENST00000371121 DYNC2H1Q8NCM8 4307 aaKnown RBP7.17□□□□□ -1.26
SMARCA1-201ENST00000371121 A8MWP4 228 aa7.16□□□□□ -1.26
SMARCA1-201ENST00000371121 Q96NJ1 140 aa7.16□□□□□ -1.26
SMARCA1-201ENST00000371121 CDC42SE1Q9NRR8 79 aa7.16□□□□□ -1.26
SMARCA1-201ENST00000371121 H3BPC8 53 aa7.16□□□□□ -1.26
SMARCA1-201ENST00000371121 KMT2BQ9UMN6 2715 aaPredicted RBP7.16□□□□□ -1.26
SMARCA1-201ENST00000371121 KRTAP10-11P60412 298 aa7.15□□□□□ -1.26
SMARCA1-201ENST00000371121 VPS13DQ5THJ4 4388 aa7.15□□□□□ -1.26
SMARCA1-201ENST00000371121 A6NED7 52 aa7.14□□□□□ -1.27
SMARCA1-201ENST00000371121 LINC01558Q9Y6Z2 57 aa7.14□□□□□ -1.27
SMARCA1-201ENST00000371121 MAST4O15021 2626 aa7.13□□□□□ -1.27
SMARCA1-201ENST00000371121 FASNP49327 2511 aaKnown RBP7.13□□□□□ -1.27
SMARCA1-201ENST00000371121 PLECQ15149 4684 aaKnown RBP7.13□□□□□ -1.27
SMARCA1-201ENST00000371121 SPAG11AQ6PDA7 123 aa7.13□□□□□ -1.27
SMARCA1-201ENST00000371121 A0A096LNI7 61 aa7.13□□□□□ -1.27
SMARCA1-201ENST00000371121 PCOTHQ58A44 107 aa7.12□□□□□ -1.27
SMARCA1-201ENST00000371121 DNAH17Q9UFH2 4485 aa7.11□□□□□ -1.27
SMARCA1-201ENST00000371121 HRES1P13985 223 aa7.11□□□□□ -1.27
SMARCA1-201ENST00000371121 KMT2AQ03164 3969 aa7.1□□□□□ -1.27
SMARCA1-201ENST00000371121 SPRR1BP22528 89 aa7.09□□□□□ -1.27
SMARCA1-201ENST00000371121 Q6ZR54 194 aa7.09□□□□□ -1.27
SMARCA1-201ENST00000371121 FBN3Q75N90 2809 aa7.09□□□□□ -1.27
SMARCA1-201ENST00000371121 DEFB131BA0A096LNP1 70 aa7.09□□□□□ -1.28
SMARCA1-201ENST00000371121 NBEAL1Q6ZS30 2694 aa7.08□□□□□ -1.28
SMARCA1-201ENST00000371121 IGKV2-24A0A0C4DH68 120 aa7.07□□□□□ -1.28
SMARCA1-201ENST00000371121 CHTF8P0CG12 524 aa7.07□□□□□ -1.28
SMARCA1-201ENST00000371121 OXLD1Q5BKU9 147 aa7.07□□□□□ -1.28
SMARCA1-201ENST00000371121 C7orf65Q6ZTY9 151 aa7.07□□□□□ -1.28
SMARCA1-201ENST00000371121 KRTAP1-5Q9BYS1 174 aa7.07□□□□□ -1.28
SMARCA1-201ENST00000371121 C11orf45Q8TAV5 145 aa7.07□□□□□ -1.28
SMARCA1-201ENST00000371121 A0A087X002 238 aa7.06□□□□□ -1.28
SMARCA1-201ENST00000371121 NDUFS5O43920 106 aa7.06□□□□□ -1.28
SMARCA1-201ENST00000371121 NOTCH2NLQ7Z3S9 236 aa7.06□□□□□ -1.28
SMARCA1-201ENST00000371121 DNAH2Q9P225 4427 aa7.05□□□□□ -1.28
SMARCA1-201ENST00000371121 K7EIL1 84 aa7.05□□□□□ -1.28
SMARCA1-201ENST00000371121 ADM2Q7Z4H4 148 aa7.05□□□□□ -1.28
SMARCA1-201ENST00000371121 KRTAP13-1Q8IUC0 172 aa7.02□□□□□ -1.29
SMARCA1-201ENST00000371121 COL6A5A8TX70 2615 aa7.02□□□□□ -1.29
SMARCA1-201ENST00000371121 H0Y9J4 135 aa7.02□□□□□ -1.29
SMARCA1-201ENST00000371121 KRTAP13-3Q3SY46 172 aa7.02□□□□□ -1.29
SMARCA1-201ENST00000371121 PRAC1Q96KF2 57 aa7.01□□□□□ -1.29
SMARCA1-201ENST00000371121 MEGF8Q7Z7M0 2845 aa7.01□□□□□ -1.29
SMARCA1-201ENST00000371121 INAFM1C9JVW0 142 aa7□□□□□ -1.29
SMARCA1-201ENST00000371121 PANO1I0J062 215 aa7□□□□□ -1.29
SMARCA1-201ENST00000371121 LINC00313P59037 77 aa7□□□□□ -1.29
SMARCA1-201ENST00000371121 NOTCH1P46531 2555 aa6.99□□□□□ -1.29
SMARCA1-201ENST00000371121 PRR26Q8N8Z3 221 aa6.99□□□□□ -1.29
SMARCA1-201ENST00000371121 PRKDCP78527 4128 aaKnown RBP6.99□□□□□ -1.29
SMARCA1-201ENST00000371121 C8orf87E5RJ46 101 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms