RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 MTORP42345 2549 aa10.23□□□□□ -0.77
CHD1L-203ENST00000369259 LINC01556Q5JQF7 62 aa10.23□□□□□ -0.77
CHD1L-203ENST00000369259 CNBPP62633 177 aaKnown RBP10.21□□□□□ -0.77
CHD1L-203ENST00000369259 REG3GQ6UW15 175 aa10.21□□□□□ -0.77
CHD1L-203ENST00000369259 CDC42SE1Q9NRR8 79 aa10.21□□□□□ -0.77
CHD1L-203ENST00000369259 IGLV8-61A0A075B6I0 122 aa10.21□□□□□ -0.78
CHD1L-203ENST00000369259 IGLV7-46A0A075B6I9 117 aa10.19□□□□□ -0.78
CHD1L-203ENST00000369259 BAHCC1Q9P281 2608 aa10.19□□□□□ -0.78
CHD1L-203ENST00000369259 HELZ2Q9BYK8 2649 aaKnown RBP10.18□□□□□ -0.78
CHD1L-203ENST00000369259 TENM4Q6N022 2769 aa10.17□□□□□ -0.78
CHD1L-203ENST00000369259 UNC79Q9P2D8 2635 aa10.17□□□□□ -0.78
CHD1L-203ENST00000369259 A8MWP4 228 aa10.16□□□□□ -0.78
CHD1L-203ENST00000369259 VWFP04275 2813 aa10.15□□□□□ -0.78
CHD1L-203ENST00000369259 ACANP16112 2415 aa10.14□□□□□ -0.79
CHD1L-203ENST00000369259 C7orf65Q6ZTY9 151 aa10.14□□□□□ -0.79
CHD1L-203ENST00000369259 LINC01558Q9Y6Z2 57 aa10.13□□□□□ -0.79
CHD1L-203ENST00000369259 HIVEP1P15822 2718 aa10.12□□□□□ -0.79
CHD1L-203ENST00000369259 LINC00472Q9H8W2 130 aa10.11□□□□□ -0.79
CHD1L-203ENST00000369259 MOBPQ13875 183 aa10.11□□□□□ -0.79
CHD1L-203ENST00000369259 PLAC8Q9NZF1 115 aa10.11□□□□□ -0.79
CHD1L-203ENST00000369259 PRLHP81277 87 aa10.1□□□□□ -0.79
CHD1L-203ENST00000369259 DNAH10OSP0CZ25 163 aa10.09□□□□□ -0.79
CHD1L-203ENST00000369259 CASC10Q5T4H9 136 aa10.09□□□□□ -0.79
CHD1L-203ENST00000369259 SPAG11AQ6PDA7 123 aa10.09□□□□□ -0.79
CHD1L-203ENST00000369259 PCOTHQ58A44 107 aa10.07□□□□□ -0.8
CHD1L-203ENST00000369259 FLNBO75369 2602 aaKnown RBP10.07□□□□□ -0.8
CHD1L-203ENST00000369259 F8P00451 2351 aa10.07□□□□□ -0.8
CHD1L-203ENST00000369259 MMP24-AS1A0A0U1RRL7 71 aa10.07□□□□□ -0.8
CHD1L-203ENST00000369259 H0Y9J4 135 aa10.04□□□□□ -0.8
CHD1L-203ENST00000369259 DEFB131BA0A096LNP1 70 aa10.02□□□□□ -0.8
CHD1L-203ENST00000369259 J3QKU1 62 aa10.02□□□□□ -0.8
CHD1L-203ENST00000369259 SPINK7P58062 85 aa10.02□□□□□ -0.8
CHD1L-203ENST00000369259 TP53AIP1Q9HCN2 124 aa10□□□□□ -0.81
CHD1L-203ENST00000369259 SPRR1BP22528 89 aa9.99□□□□□ -0.81
CHD1L-203ENST00000369259 PKD1L1Q8TDX9 2849 aa9.98□□□□□ -0.81
CHD1L-203ENST00000369259 HRES1P13985 223 aa9.97□□□□□ -0.81
CHD1L-203ENST00000369259 Q6ZR54 194 aa9.96□□□□□ -0.82
CHD1L-203ENST00000369259 ITPR2Q14571 2701 aa9.96□□□□□ -0.82
CHD1L-203ENST00000369259 ASB16-AS1Q495Z4 193 aa9.95□□□□□ -0.82
CHD1L-203ENST00000369259 SMR3AQ99954 134 aa9.95□□□□□ -0.82
CHD1L-203ENST00000369259 HECTD1Q9ULT8 2610 aa9.95□□□□□ -0.82
CHD1L-203ENST00000369259 IGKV2-24A0A0C4DH68 120 aa9.94□□□□□ -0.82
CHD1L-203ENST00000369259 A0A096LNI7 61 aa9.94□□□□□ -0.82
CHD1L-203ENST00000369259 C11orf45Q8TAV5 145 aa9.93□□□□□ -0.82
CHD1L-203ENST00000369259 OTOGQ6ZRI0 2925 aa9.91□□□□□ -0.82
CHD1L-203ENST00000369259 PDZD2O15018 2839 aa9.9□□□□□ -0.82
CHD1L-203ENST00000369259 C8orf87E5RJ46 101 aa9.89□□□□□ -0.83
CHD1L-203ENST00000369259 NOTCH2Q04721 2471 aa9.89□□□□□ -0.83
CHD1L-203ENST00000369259 C8orf17Q9NRJ1 99 aa9.88□□□□□ -0.83
CHD1L-203ENST00000369259 TENM1Q9UKZ4 2725 aa9.87□□□□□ -0.83
CHD1L-203ENST00000369259 LINC00313P59037 77 aa9.87□□□□□ -0.83
CHD1L-203ENST00000369259 KRTAP11-1Q8IUC1 163 aa9.87□□□□□ -0.83
CHD1L-203ENST00000369259 Q96NJ1 140 aa9.87□□□□□ -0.83
CHD1L-203ENST00000369259 DNAH1Q9P2D7 4330 aa9.84□□□□□ -0.83
CHD1L-203ENST00000369259 TRRAPQ9Y4A5 3859 aa9.84□□□□□ -0.83
CHD1L-203ENST00000369259 TEP1Q99973 2627 aaKnown RBP9.84□□□□□ -0.83
CHD1L-203ENST00000369259 KRTAP10-11P60412 298 aa9.83□□□□□ -0.84
CHD1L-203ENST00000369259 OXLD1Q5BKU9 147 aa9.82□□□□□ -0.84
CHD1L-203ENST00000369259 PRR26Q8N8Z3 221 aa9.81□□□□□ -0.84
CHD1L-203ENST00000369259 PRAC1Q96KF2 57 aa9.81□□□□□ -0.84
CHD1L-203ENST00000369259 MAST4O15021 2626 aa9.81□□□□□ -0.84
CHD1L-203ENST00000369259 C4orf48Q5BLP8 95 aa9.81□□□□□ -0.84
CHD1L-203ENST00000369259 TENM3Q9P273 2699 aa9.81□□□□□ -0.84
CHD1L-203ENST00000369259 IGHV6-1A0A0B4J1U7 121 aa9.8□□□□□ -0.84
CHD1L-203ENST00000369259 SRRM2Q9UQ35 2752 aaKnown RBP9.8□□□□□ -0.84
CHD1L-203ENST00000369259 A0A1B0GVX0 72 aa9.79□□□□□ -0.84
CHD1L-203ENST00000369259 MRPL34Q9BQ48 92 aaKnown RBP9.79□□□□□ -0.84
CHD1L-203ENST00000369259 TENM2Q9NT68 2774 aa9.78□□□□□ -0.84
CHD1L-203ENST00000369259 PLA2G1BP04054 148 aaKnown RBP9.77□□□□□ -0.85
CHD1L-203ENST00000369259 ATRQ13535 2644 aa9.77□□□□□ -0.85
CHD1L-203ENST00000369259 CHTF8P0CG12 524 aa9.76□□□□□ -0.85
CHD1L-203ENST00000369259 INAFM1C9JVW0 142 aa9.74□□□□□ -0.85
CHD1L-203ENST00000369259 ADM2Q7Z4H4 148 aa9.74□□□□□ -0.85
CHD1L-203ENST00000369259 IGLV9-49A0A0B4J1Y8 123 aa9.73□□□□□ -0.85
CHD1L-203ENST00000369259 CDK2AP2O75956 126 aa9.73□□□□□ -0.85
CHD1L-203ENST00000369259 MDFIQ99750 246 aa9.73□□□□□ -0.85
CHD1L-203ENST00000369259 ACYP2P14621 99 aa9.72□□□□□ -0.85
CHD1L-203ENST00000369259 LINC01554Q52M75 96 aa9.71□□□□□ -0.85
CHD1L-203ENST00000369259 K7EIL1 84 aa9.7□□□□□ -0.86
CHD1L-203ENST00000369259 KRTAP13-1Q8IUC0 172 aa9.7□□□□□ -0.86
CHD1L-203ENST00000369259 A0A087X002 238 aa9.69□□□□□ -0.86
CHD1L-203ENST00000369259 NOTCH2NLQ7Z3S9 236 aa9.69□□□□□ -0.86
CHD1L-203ENST00000369259 Q5W150 140 aa9.66□□□□□ -0.86
CHD1L-203ENST00000369259 KRTAP1-5Q9BYS1 174 aa9.66□□□□□ -0.86
CHD1L-203ENST00000369259 RTL8CO15255 209 aa9.65□□□□□ -0.86
CHD1L-203ENST00000369259 SPATA8Q6RVD6 105 aa9.65□□□□□ -0.86
CHD1L-203ENST00000369259 KRTAP13-3Q3SY46 172 aa9.65□□□□□ -0.87
CHD1L-203ENST00000369259 ANK2Q01484 3957 aa9.64□□□□□ -0.87
CHD1L-203ENST00000369259 A0A1B0GU69 56 aa9.63□□□□□ -0.87
CHD1L-203ENST00000369259 C14orf177Q52M58 125 aa9.63□□□□□ -0.87
CHD1L-203ENST00000369259 LINC00483Q53H64 154 aa9.61□□□□□ -0.87
CHD1L-203ENST00000369259 ALMS1Q8TCU4 4167 aa9.61□□□□□ -0.87
CHD1L-203ENST00000369259 DMAC1Q96GE9 116 aa9.6□□□□□ -0.87
CHD1L-203ENST00000369259 DNAH10Q8IVF4 4471 aa9.6□□□□□ -0.87
CHD1L-203ENST00000369259 NSD1Q96L73 2696 aaPredicted RBP9.59□□□□□ -0.88
CHD1L-203ENST00000369259 CSMD3Q7Z407 3707 aa9.58□□□□□ -0.88
CHD1L-203ENST00000369259 MIR22HGQ0VDD5 57 aa9.56□□□□□ -0.88
CHD1L-203ENST00000369259 WWC2-AS2Q96NR7 200 aa9.56□□□□□ -0.88
CHD1L-203ENST00000369259 PANO1I0J062 215 aa9.55□□□□□ -0.88
CHD1L-203ENST00000369259 H3BS24 57 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms