RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 SPRR4Q96PI1 79 aa8.91□□□□□ -0.98
SMPDL3A-201ENST00000368440 hADV29S1A0JD25 119 aa8.89□□□□□ -0.99
SMPDL3A-201ENST00000368440 BAALC-AS2P0C853 105 aa8.89□□□□□ -0.99
SMPDL3A-201ENST00000368440 CRYGAP11844 174 aa8.89□□□□□ -0.99
SMPDL3A-201ENST00000368440 FAM229BQ4G0N7 80 aa8.89□□□□□ -0.99
SMPDL3A-201ENST00000368440 SNCGO76070 127 aa8.88□□□□□ -0.99
SMPDL3A-201ENST00000368440 HMCN2Q8NDA2 5059 aa8.87□□□□□ -0.99
SMPDL3A-201ENST00000368440 TRBV7-6A0A0J9YX20 115 aa8.87□□□□□ -0.99
SMPDL3A-201ENST00000368440 H3BT86 120 aa8.87□□□□□ -0.99
SMPDL3A-201ENST00000368440 TYMSOSQ8TAI1 123 aa8.87□□□□□ -0.99
SMPDL3A-201ENST00000368440 A0A1B0GV72 72 aa8.86□□□□□ -0.99
SMPDL3A-201ENST00000368440 ORMDL1Q9P0S3 153 aa8.86□□□□□ -0.99
SMPDL3A-201ENST00000368440 ZNF706Q9Y5V0 76 aaPredicted RBP8.86□□□□□ -0.99
SMPDL3A-201ENST00000368440 A0A1B0GX51 115 aa8.85□□□□□ -0.99
SMPDL3A-201ENST00000368440 Q6ZQY7 126 aa8.85□□□□□ -0.99
SMPDL3A-201ENST00000368440 C3orf22Q8N5N4 141 aa8.85□□□□□ -0.99
SMPDL3A-201ENST00000368440 TEN1Q86WV5 123 aa8.85□□□□□ -0.99
SMPDL3A-201ENST00000368440 GAGE2AQ6NT46 116 aa8.83□□□□□ -1
SMPDL3A-201ENST00000368440 TEX49A0A1B0GTD5 131 aa8.83□□□□□ -1
SMPDL3A-201ENST00000368440 LINC00483Q53H64 154 aa8.83□□□□□ -1
SMPDL3A-201ENST00000368440 ST20-AS1Q8NBB2 130 aa8.83□□□□□ -1
SMPDL3A-201ENST00000368440 OCIAD2Q56VL3 154 aa8.82□□□□□ -1
SMPDL3A-201ENST00000368440 DEFB105AQ8NG35 78 aa8.81□□□□□ -1
SMPDL3A-201ENST00000368440 PPDPFLQ8WWR9 84 aa8.79□□□□□ -1
SMPDL3A-201ENST00000368440 DHRS4-AS1Q9P1J3 65 aa8.79□□□□□ -1
SMPDL3A-201ENST00000368440 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.79□□□□□ -1
SMPDL3A-201ENST00000368440 TMEM256-PLSCR3K7ERE1 68 aa8.77□□□□□ -1.01
SMPDL3A-201ENST00000368440 LINC00304Q8N9R0 145 aa8.77□□□□□ -1.01
SMPDL3A-201ENST00000368440 LAMTOR3Q9UHA4 124 aa8.76□□□□□ -1.01
SMPDL3A-201ENST00000368440 IGLV9-49A0A0B4J1Y8 123 aa8.75□□□□□ -1.01
SMPDL3A-201ENST00000368440 K7ERU9 68 aa8.74□□□□□ -1.01
SMPDL3A-201ENST00000368440 MOBPQ13875 183 aa8.73□□□□□ -1.01
SMPDL3A-201ENST00000368440 C14orf132Q9NPU4 83 aa8.73□□□□□ -1.01
SMPDL3A-201ENST00000368440 SPRR1BP22528 89 aa8.72□□□□□ -1.01
SMPDL3A-201ENST00000368440 Q8NBF4 154 aa8.72□□□□□ -1.01
SMPDL3A-201ENST00000368440 J3QR89 54 aa8.71□□□□□ -1.01
SMPDL3A-201ENST00000368440 LINC01547P58512 204 aaPredicted RBP8.7□□□□□ -1.02
SMPDL3A-201ENST00000368440 Q8N377 158 aa8.7□□□□□ -1.02
SMPDL3A-201ENST00000368440 GHRHP01286 108 aa8.69□□□□□ -1.02
SMPDL3A-201ENST00000368440 H3BQ85 93 aa8.68□□□□□ -1.02
SMPDL3A-201ENST00000368440 NDUFV3P56181 108 aaKnown RBP8.68□□□□□ -1.02
SMPDL3A-201ENST00000368440 C9orf153Q5TBE3 101 aa8.68□□□□□ -1.02
SMPDL3A-201ENST00000368440 IGLV5-48A0A075B6I7 105 aa8.67□□□□□ -1.02
SMPDL3A-201ENST00000368440 JMJD7-PLA2G4BH0Y9G9 81 aa8.67□□□□□ -1.02
SMPDL3A-201ENST00000368440 OBSCN-AS1Q96MR7 158 aa8.67□□□□□ -1.02
SMPDL3A-201ENST00000368440 RBM3P98179 157 aaKnown RBP8.66□□□□□ -1.02
SMPDL3A-201ENST00000368440 SSBP3-AS1Q7Z2R9 100 aa8.66□□□□□ -1.02
SMPDL3A-201ENST00000368440 RETNLBQ9BQ08 111 aa8.66□□□□□ -1.02
SMPDL3A-201ENST00000368440 PRR4Q16378 134 aa8.66□□□□□ -1.02
SMPDL3A-201ENST00000368440 SMIM29Q86T20 159 aa8.66□□□□□ -1.02
SMPDL3A-201ENST00000368440 SPAG11AQ6PDA7 123 aa8.65□□□□□ -1.02
SMPDL3A-201ENST00000368440 LRP2P98164 4655 aa8.65□□□□□ -1.03
SMPDL3A-201ENST00000368440 LPAP08519 4548 aa8.64□□□□□ -1.03
SMPDL3A-201ENST00000368440 C4orf48Q5BLP8 95 aa8.64□□□□□ -1.03
SMPDL3A-201ENST00000368440 VPS25Q9BRG1 176 aa8.64□□□□□ -1.03
SMPDL3A-201ENST00000368440 DSCR8Q96T75 97 aa8.63□□□□□ -1.03
SMPDL3A-201ENST00000368440 SPINK1P00995 79 aa8.6□□□□□ -1.03
SMPDL3A-201ENST00000368440 F8WEM9 126 aa8.59□□□□□ -1.03
SMPDL3A-201ENST00000368440 CCKP06307 115 aa8.59□□□□□ -1.03
SMPDL3A-201ENST00000368440 Q6ZQT0 140 aa8.59□□□□□ -1.03
SMPDL3A-201ENST00000368440 UBR4Q5T4S7 5183 aa8.59□□□□□ -1.03
SMPDL3A-201ENST00000368440 LOC110117498A0A087WWA1 95 aa8.57□□□□□ -1.04
SMPDL3A-201ENST00000368440 A0A0G2JQZ4 141 aa8.57□□□□□ -1.04
SMPDL3A-201ENST00000368440 HRCT1Q6UXD1 115 aa8.57□□□□□ -1.04
SMPDL3A-201ENST00000368440 CDIP1Q9H305 208 aa8.57□□□□□ -1.04
SMPDL3A-201ENST00000368440 TRBV7-4A0A0J9YYF1 115 aa8.56□□□□□ -1.04
SMPDL3A-201ENST00000368440 RPS29P62273 56 aaKnown RBP8.55□□□□□ -1.04
SMPDL3A-201ENST00000368440 FAM240AA0A1B0GVK7 77 aa8.54□□□□□ -1.04
SMPDL3A-201ENST00000368440 ACYP1P07311 99 aa8.52□□□□□ -1.05
SMPDL3A-201ENST00000368440 PDE6GP18545 87 aa8.52□□□□□ -1.05
SMPDL3A-201ENST00000368440 LINC00846Q9NV44 126 aa8.52□□□□□ -1.05
SMPDL3A-201ENST00000368440 IGLV7-46A0A075B6I9 117 aa8.51□□□□□ -1.05
SMPDL3A-201ENST00000368440 IGFL1Q6UW32 110 aa8.5□□□□□ -1.05
SMPDL3A-201ENST00000368440 CD164Q04900 197 aa8.49□□□□□ -1.05
SMPDL3A-201ENST00000368440 IGLV8-61A0A075B6I0 122 aa8.48□□□□□ -1.05
SMPDL3A-201ENST00000368440 A0A1W2PNM2 257 aa8.48□□□□□ -1.05
SMPDL3A-201ENST00000368440 FP248Q71RG6 208 aaPredicted RBP8.48□□□□□ -1.05
SMPDL3A-201ENST00000368440 MT-ATP8P03928 68 aa8.47□□□□□ -1.05
SMPDL3A-201ENST00000368440 PCP4P48539 62 aa8.47□□□□□ -1.05
SMPDL3A-201ENST00000368440 LIMD2Q9BT23 127 aa8.47□□□□□ -1.05
SMPDL3A-201ENST00000368440 TPRXLQ17RH7 258 aa8.46□□□□□ -1.06
SMPDL3A-201ENST00000368440 SIGMAR1Q99720 223 aa8.45□□□□□ -1.06
SMPDL3A-201ENST00000368440 Q6JHZ5 121 aa8.44□□□□□ -1.06
SMPDL3A-201ENST00000368440 UBL5Q9BZL1 73 aa8.43□□□□□ -1.06
SMPDL3A-201ENST00000368440 IGKV3D-7A0A0C4DH55 119 aa8.41□□□□□ -1.06
SMPDL3A-201ENST00000368440 KRTAP13-3Q3SY46 172 aa8.41□□□□□ -1.06
SMPDL3A-201ENST00000368440 LINC00643Q86TS7 51 aa8.41□□□□□ -1.06
SMPDL3A-201ENST00000368440 Q5XG85 94 aa8.4□□□□□ -1.06
SMPDL3A-201ENST00000368440 Q6ZVQ6 151 aa8.4□□□□□ -1.06
SMPDL3A-201ENST00000368440 C21orf62-AS1Q17RA5 79 aa8.39□□□□□ -1.07
SMPDL3A-201ENST00000368440 RNF213Q63HN8 5207 aa8.39□□□□□ -1.07
SMPDL3A-201ENST00000368440 A0A087WSZ3 146 aa8.38□□□□□ -1.07
SMPDL3A-201ENST00000368440 TRBV7-7A0A0K0K1E9 115 aa8.38□□□□□ -1.07
SMPDL3A-201ENST00000368440 NREPQ16612 68 aa8.38□□□□□ -1.07
SMPDL3A-201ENST00000368440 SCGB1A1P11684 91 aa8.37□□□□□ -1.07
SMPDL3A-201ENST00000368440 C1orf195Q5TG92 126 aa8.37□□□□□ -1.07
SMPDL3A-201ENST00000368440 DEFB116Q30KQ4 102 aa8.32□□□□□ -1.08
SMPDL3A-201ENST00000368440 A0A1B0GW54 56 aa8.32□□□□□ -1.08
SMPDL3A-201ENST00000368440 Q6Q795 121 aa8.32□□□□□ -1.08
SMPDL3A-201ENST00000368440 ASB16-AS1Q495Z4 193 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 208.4 ms