RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 PCP4P48539 62 aa9.17□□□□□ -0.94
NEK2-201ENST00000366998 HAMPP81172 84 aa9.17□□□□□ -0.94
NEK2-201ENST00000366998 Q6JHZ5 121 aa9.17□□□□□ -0.94
NEK2-201ENST00000366998 Q6ZSA8 131 aa9.17□□□□□ -0.94
NEK2-201ENST00000366998 IGKV3D-7A0A0C4DH55 119 aa9.17□□□□□ -0.94
NEK2-201ENST00000366998 LINC00336Q6ZUF6 198 aa9.17□□□□□ -0.94
NEK2-201ENST00000366998 TRBV7-7A0A0K0K1E9 115 aa9.16□□□□□ -0.94
NEK2-201ENST00000366998 SPRR1BP22528 89 aa9.16□□□□□ -0.94
NEK2-201ENST00000366998 Q6Q795 121 aa9.15□□□□□ -0.94
NEK2-201ENST00000366998 ZNF861PO60384 105 aa9.14□□□□□ -0.95
NEK2-201ENST00000366998 Q6ZVQ6 151 aa9.14□□□□□ -0.95
NEK2-201ENST00000366998 A0A1W2PNM2 257 aa9.13□□□□□ -0.95
NEK2-201ENST00000366998 IMUPQ9GZP8 106 aa9.13□□□□□ -0.95
NEK2-201ENST00000366998 Q8NBF4 154 aa9.12□□□□□ -0.95
NEK2-201ENST00000366998 SPRR4Q96PI1 79 aa9.12□□□□□ -0.95
NEK2-201ENST00000366998 ZNF706Q9Y5V0 76 aaPredicted RBP9.12□□□□□ -0.95
NEK2-201ENST00000366998 IGLV8-61A0A075B6I0 122 aa9.11□□□□□ -0.95
NEK2-201ENST00000366998 IGLV7-43P04211 117 aa9.11□□□□□ -0.95
NEK2-201ENST00000366998 ATP5EP2Q5VTU8 51 aa9.11□□□□□ -0.95
NEK2-201ENST00000366998 IGFL1Q6UW32 110 aa9.11□□□□□ -0.95
NEK2-201ENST00000366998 A0A0G2JQZ4 141 aa9.11□□□□□ -0.95
NEK2-201ENST00000366998 NREPQ16612 68 aa9.08□□□□□ -0.96
NEK2-201ENST00000366998 RYR2Q92736 4967 aa9.08□□□□□ -0.96
NEK2-201ENST00000366998 A0A1B0GW54 56 aa9.07□□□□□ -0.96
NEK2-201ENST00000366998 IGLV9-49A0A0B4J1Y8 123 aa9.06□□□□□ -0.96
NEK2-201ENST00000366998 LINC00483Q53H64 154 aa9.06□□□□□ -0.96
NEK2-201ENST00000366998 HIST1H4AP62805 103 aaKnown RBP9.06□□□□□ -0.96
NEK2-201ENST00000366998 C9orf153Q5TBE3 101 aa9.05□□□□□ -0.96
NEK2-201ENST00000366998 FAM236AA0A1B0GUQ0 79 aa9.04□□□□□ -0.96
NEK2-201ENST00000366998 FAM236BA0A1B0GV22 79 aa9.04□□□□□ -0.96
NEK2-201ENST00000366998 A0A1B0GVY2 172 aa9.04□□□□□ -0.96
NEK2-201ENST00000366998 CRYGAP11844 174 aa9.04□□□□□ -0.96
NEK2-201ENST00000366998 PKHD1P08F94 4074 aa9.03□□□□□ -0.96
NEK2-201ENST00000366998 A0A087WVE0 104 aa9.03□□□□□ -0.96
NEK2-201ENST00000366998 ANAPC11Q9NYG5 84 aa9.03□□□□□ -0.96
NEK2-201ENST00000366998 CXCL6P80162 114 aa9.02□□□□□ -0.96
NEK2-201ENST00000366998 KMT2CQ8NEZ4 4911 aaKnown RBP9.01□□□□□ -0.97
NEK2-201ENST00000366998 LRP1BQ9NZR2 4599 aa9□□□□□ -0.97
NEK2-201ENST00000366998 A0A087WSZ3 146 aa9□□□□□ -0.97
NEK2-201ENST00000366998 ANAPC13Q9BS18 74 aa9□□□□□ -0.97
NEK2-201ENST00000366998 BPY2O14599 106 aa8.99□□□□□ -0.97
NEK2-201ENST00000366998 MOBPQ13875 183 aa8.99□□□□□ -0.97
NEK2-201ENST00000366998 DYNC1H1Q14204 4646 aaKnown RBP8.98□□□□□ -0.97
NEK2-201ENST00000366998 RPL37AP61513 92 aaKnown RBP8.95□□□□□ -0.98
NEK2-201ENST00000366998 Q8N9L7 120 aa8.94□□□□□ -0.98
NEK2-201ENST00000366998 HRCT1Q6UXD1 115 aa8.93□□□□□ -0.98
NEK2-201ENST00000366998 VPS13BQ7Z7G8 4022 aa8.92□□□□□ -0.98
NEK2-201ENST00000366998 SMR3BP02814 79 aaPredicted RBP8.91□□□□□ -0.98
NEK2-201ENST00000366998 ATOX1O00244 68 aa8.9□□□□□ -0.98
NEK2-201ENST00000366998 IGKV4-1P06312 121 aa8.9□□□□□ -0.98
NEK2-201ENST00000366998 DEFB116Q30KQ4 102 aa8.9□□□□□ -0.98
NEK2-201ENST00000366998 DSCR10P59022 87 aa8.87□□□□□ -0.99
NEK2-201ENST00000366998 APOBP04114 4563 aaKnown RBP8.86□□□□□ -0.99
NEK2-201ENST00000366998 A0A087X002 238 aa8.85□□□□□ -0.99
NEK2-201ENST00000366998 FAM229BQ4G0N7 80 aa8.85□□□□□ -0.99
NEK2-201ENST00000366998 K7EQZ3 153 aa8.84□□□□□ -0.99
NEK2-201ENST00000366998 SSBP3-AS1Q7Z2R9 100 aa8.84□□□□□ -0.99
NEK2-201ENST00000366998 SS18L2Q9UHA2 77 aa8.84□□□□□ -0.99
NEK2-201ENST00000366998 KRTAP1-4P0C5Y4 121 aa8.83□□□□□ -1
NEK2-201ENST00000366998 KRTAP13-2Q52LG2 175 aa8.83□□□□□ -1
NEK2-201ENST00000366998 LINC00472Q9H8W2 130 aa8.83□□□□□ -1
NEK2-201ENST00000366998 SPINK6Q6UWN8 80 aa8.82□□□□□ -1
NEK2-201ENST00000366998 RYR3Q15413 4870 aa8.81□□□□□ -1
NEK2-201ENST00000366998 CCDC179H3BU77 68 aa8.8□□□□□ -1
NEK2-201ENST00000366998 PLA2G1BP04054 148 aaKnown RBP8.79□□□□□ -1
NEK2-201ENST00000366998 CD164Q04900 197 aa8.79□□□□□ -1
NEK2-201ENST00000366998 SERP2Q8N6R1 65 aa8.78□□□□□ -1
NEK2-201ENST00000366998 J3KT08 172 aa8.77□□□□□ -1.01
NEK2-201ENST00000366998 COX7CP15954 63 aa8.77□□□□□ -1.01
NEK2-201ENST00000366998 Q96NJ1 140 aa8.77□□□□□ -1.01
NEK2-201ENST00000366998 A8MWP4 228 aa8.76□□□□□ -1.01
NEK2-201ENST00000366998 UQCRQO14949 82 aa8.75□□□□□ -1.01
NEK2-201ENST00000366998 FAT1Q14517 4588 aa8.74□□□□□ -1.01
NEK2-201ENST00000366998 HCG22E2RYF7 251 aa8.74□□□□□ -1.01
NEK2-201ENST00000366998 KRTAP10-4P60372 401 aaPredicted RBP8.74□□□□□ -1.01
NEK2-201ENST00000366998 PRR15Q8IV56 129 aa8.74□□□□□ -1.01
NEK2-201ENST00000366998 SMIM20Q8N5G0 67 aa8.74□□□□□ -1.01
NEK2-201ENST00000366998 TYMSOSQ8TAI1 123 aa8.74□□□□□ -1.01
NEK2-201ENST00000366998 TRAV7A0A075B6U4 112 aa8.72□□□□□ -1.01
NEK2-201ENST00000366998 NDUFB1O75438 58 aa8.72□□□□□ -1.01
NEK2-201ENST00000366998 WFDC13Q8IUB5 93 aa8.71□□□□□ -1.01
NEK2-201ENST00000366998 CDK2AP2O75956 126 aa8.7□□□□□ -1.02
NEK2-201ENST00000366998 PRR26Q8N8Z3 221 aa8.7□□□□□ -1.02
NEK2-201ENST00000366998 FAM229AH3BQW9 127 aa8.69□□□□□ -1.02
NEK2-201ENST00000366998 C4orf48Q5BLP8 95 aa8.68□□□□□ -1.02
NEK2-201ENST00000366998 CASC2Q6XLA1 102 aa8.66□□□□□ -1.02
NEK2-201ENST00000366998 ASB16-AS1Q495Z4 193 aa8.66□□□□□ -1.02
NEK2-201ENST00000366998 OCR1Q9BZK8 76 aa8.66□□□□□ -1.02
NEK2-201ENST00000366998 IGHV6-1A0A0B4J1U7 121 aa8.65□□□□□ -1.02
NEK2-201ENST00000366998 A0A1B0GVX0 72 aa8.65□□□□□ -1.02
NEK2-201ENST00000366998 LIMD2Q9BT23 127 aa8.65□□□□□ -1.02
NEK2-201ENST00000366998 MMP24-AS1A0A0U1RRL7 71 aa8.64□□□□□ -1.03
NEK2-201ENST00000366998 PKHD1L1Q86WI1 4243 aa8.63□□□□□ -1.03
NEK2-201ENST00000366998 KRTAP29-1A8MX34 341 aaPredicted RBP8.63□□□□□ -1.03
NEK2-201ENST00000366998 Q5XG85 94 aa8.63□□□□□ -1.03
NEK2-201ENST00000366998 C20orf197Q8N268 126 aa8.63□□□□□ -1.03
NEK2-201ENST00000366998 Q5VSD8 79 aa8.62□□□□□ -1.03
NEK2-201ENST00000366998 LINC00304Q8N9R0 145 aa8.62□□□□□ -1.03
NEK2-201ENST00000366998 HSPG2P98160 4391 aa8.62□□□□□ -1.03
NEK2-201ENST00000366998 C8orf17Q9NRJ1 99 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms