RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 NIPBLQ6KC79 2804 aaeCLIP9.03□□□□□ -0.96
COL6A1-201ENST00000361866 DNAH10OSP0CZ25 163 aa9.03□□□□□ -0.96
COL6A1-201ENST00000361866 KRTAP10-11P60412 298 aa9.02□□□□□ -0.97
COL6A1-201ENST00000361866 OCR1Q9BZK8 76 aa9.01□□□□□ -0.97
COL6A1-201ENST00000361866 ZNF706Q9Y5V0 76 aaPredicted RBP9.01□□□□□ -0.97
COL6A1-201ENST00000361866 TRAV22A0A0B4J277 110 aa9.01□□□□□ -0.97
COL6A1-201ENST00000361866 FP248Q71RG6 208 aaPredicted RBP9.01□□□□□ -0.97
COL6A1-201ENST00000361866 CD164Q04900 197 aa9□□□□□ -0.97
COL6A1-201ENST00000361866 NUPR2A6NF83 97 aa9□□□□□ -0.97
COL6A1-201ENST00000361866 MOBPQ13875 183 aa9□□□□□ -0.97
COL6A1-201ENST00000361866 STAB2Q8WWQ8 2551 aa8.98□□□□□ -0.97
COL6A1-201ENST00000361866 C16orf90A8MZG2 172 aa8.98□□□□□ -0.97
COL6A1-201ENST00000361866 FAM229BQ4G0N7 80 aa8.97□□□□□ -0.97
COL6A1-201ENST00000361866 IGLV5-48A0A075B6I7 105 aa8.96□□□□□ -0.98
COL6A1-201ENST00000361866 SPINK1P00995 79 aa8.93□□□□□ -0.98
COL6A1-201ENST00000361866 A8MWP4 228 aa8.92□□□□□ -0.98
COL6A1-201ENST00000361866 DSCR10P59022 87 aa8.92□□□□□ -0.98
COL6A1-201ENST00000361866 PRR15Q8IV56 129 aa8.91□□□□□ -0.98
COL6A1-201ENST00000361866 MDFIQ99750 246 aa8.9□□□□□ -0.98
COL6A1-201ENST00000361866 COA5Q86WW8 74 aa8.9□□□□□ -0.99
COL6A1-201ENST00000361866 IGLV5-52A0A0A0MRZ9 124 aa8.89□□□□□ -0.99
COL6A1-201ENST00000361866 ANAPC11Q9NYG5 84 aa8.88□□□□□ -0.99
COL6A1-201ENST00000361866 TLX1NBP0CAT3 122 aa8.88□□□□□ -0.99
COL6A1-201ENST00000361866 KTN1-AS1Q86SY8 53 aa8.87□□□□□ -0.99
COL6A1-201ENST00000361866 TP53AIP1Q9HCN2 124 aa8.87□□□□□ -0.99
COL6A1-201ENST00000361866 IGKV2D-30A0A075B6S6 120 aa8.86□□□□□ -0.99
COL6A1-201ENST00000361866 H3BPC8 53 aa8.86□□□□□ -0.99
COL6A1-201ENST00000361866 IGKV2-30P06310 120 aa8.86□□□□□ -0.99
COL6A1-201ENST00000361866 K7EIL1 84 aa8.84□□□□□ -0.99
COL6A1-201ENST00000361866 ATP11AUNQ6ZP68 121 aa8.83□□□□□ -1
COL6A1-201ENST00000361866 PLA2G2DQ9UNK4 145 aa8.83□□□□□ -1
COL6A1-201ENST00000361866 CYP4F30PQ9H0H9 118 aa8.83□□□□□ -1
COL6A1-201ENST00000361866 KMT2BQ9UMN6 2715 aaPredicted RBP8.82□□□□□ -1
COL6A1-201ENST00000361866 SPRR4Q96PI1 79 aa8.81□□□□□ -1
COL6A1-201ENST00000361866 NBDYA0A0U1RRE5 68 aa8.81□□□□□ -1
COL6A1-201ENST00000361866 C1orf134Q5TEV5 83 aa8.81□□□□□ -1
COL6A1-201ENST00000361866 LOC101927531A0A1B0GV80 90 aa8.8□□□□□ -1
COL6A1-201ENST00000361866 IGLV8-61A0A075B6I0 122 aa8.8□□□□□ -1
COL6A1-201ENST00000361866 K7ERS5 55 aa8.78□□□□□ -1
COL6A1-201ENST00000361866 SPACA4Q8TDM5 124 aa8.78□□□□□ -1
COL6A1-201ENST00000361866 C8orf17Q9NRJ1 99 aa8.78□□□□□ -1
COL6A1-201ENST00000361866 A0A1B0GU69 56 aa8.78□□□□□ -1
COL6A1-201ENST00000361866 MRPL34Q9BQ48 92 aaKnown RBP8.78□□□□□ -1
COL6A1-201ENST00000361866 Q1T7F1 81 aa8.77□□□□□ -1.01
COL6A1-201ENST00000361866 RBM12B-AS1Q9P1G2 102 aa8.77□□□□□ -1.01
COL6A1-201ENST00000361866 C7orf65Q6ZTY9 151 aa8.76□□□□□ -1.01
COL6A1-201ENST00000361866 ACYP2P14621 99 aa8.76□□□□□ -1.01
COL6A1-201ENST00000361866 KRTAP26-1Q6PEX3 210 aa8.76□□□□□ -1.01
COL6A1-201ENST00000361866 C8orf87E5RJ46 101 aa8.75□□□□□ -1.01
COL6A1-201ENST00000361866 RTL8CO15255 209 aa8.75□□□□□ -1.01
COL6A1-201ENST00000361866 C9orf163Q8N9P6 203 aa8.75□□□□□ -1.01
COL6A1-201ENST00000361866 IGLV5-37A0A075B6J1 123 aa8.73□□□□□ -1.01
COL6A1-201ENST00000361866 LCA10Q71F78 164 aa8.72□□□□□ -1.01
COL6A1-201ENST00000361866 SPRR1AP35321 89 aa8.72□□□□□ -1.01
COL6A1-201ENST00000361866 A0A1B0GVX0 72 aa8.7□□□□□ -1.02
COL6A1-201ENST00000361866 PRR26Q8N8Z3 221 aa8.7□□□□□ -1.02
COL6A1-201ENST00000361866 LINC00313P59037 77 aa8.69□□□□□ -1.02
COL6A1-201ENST00000361866 CNBPP62633 177 aaKnown RBP8.69□□□□□ -1.02
COL6A1-201ENST00000361866 CSMD2Q7Z408 3487 aa8.67□□□□□ -1.02
COL6A1-201ENST00000361866 VWFP04275 2813 aa8.67□□□□□ -1.02
COL6A1-201ENST00000361866 SPANXA2-OT1Q8N9U9 137 aa8.67□□□□□ -1.02
COL6A1-201ENST00000361866 PSORS1C2Q9UIG4 136 aa8.65□□□□□ -1.02
COL6A1-201ENST00000361866 TENM3Q9P273 2699 aa8.64□□□□□ -1.03
COL6A1-201ENST00000361866 PDZD2O15018 2839 aa8.64□□□□□ -1.03
COL6A1-201ENST00000361866 Q8N9P0 234 aaPredicted RBP8.64□□□□□ -1.03
COL6A1-201ENST00000361866 CDC42SE1Q9NRR8 79 aa8.64□□□□□ -1.03
COL6A1-201ENST00000361866 WWC2-AS2Q96NR7 200 aa8.64□□□□□ -1.03
COL6A1-201ENST00000361866 TNP2Q05952 138 aa8.63□□□□□ -1.03
COL6A1-201ENST00000361866 DMBT1Q9UGM3 2413 aaPredicted RBP8.63□□□□□ -1.03
COL6A1-201ENST00000361866 ZNF861PO60384 105 aa8.63□□□□□ -1.03
COL6A1-201ENST00000361866 TENM1Q9UKZ4 2725 aa8.62□□□□□ -1.03
COL6A1-201ENST00000361866 KRTAP1-5Q9BYS1 174 aa8.62□□□□□ -1.03
COL6A1-201ENST00000361866 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.6□□□□□ -1.03
COL6A1-201ENST00000361866 Q5VV11 94 aa8.6□□□□□ -1.03
COL6A1-201ENST00000361866 A0A087WTM6 91 aa8.59□□□□□ -1.03
COL6A1-201ENST00000361866 KRTAP4-16G5E9R7 235 aaPredicted RBP8.59□□□□□ -1.03
COL6A1-201ENST00000361866 MMP24-AS1A0A0U1RRL7 71 aa8.59□□□□□ -1.03
COL6A1-201ENST00000361866 FBN1P35555 2871 aaKnown RBP8.59□□□□□ -1.03
COL6A1-201ENST00000361866 FAM229AH3BQW9 127 aa8.58□□□□□ -1.04
COL6A1-201ENST00000361866 APLNQ9ULZ1 77 aa8.58□□□□□ -1.04
COL6A1-201ENST00000361866 PRAC1Q96KF2 57 aa8.57□□□□□ -1.04
COL6A1-201ENST00000361866 IGLV7-46A0A075B6I9 117 aa8.57□□□□□ -1.04
COL6A1-201ENST00000361866 LINC00472Q9H8W2 130 aa8.57□□□□□ -1.04
COL6A1-201ENST00000361866 TENM4Q6N022 2769 aa8.56□□□□□ -1.04
COL6A1-201ENST00000361866 Q96NJ1 140 aa8.56□□□□□ -1.04
COL6A1-201ENST00000361866 H3BS24 57 aa8.55□□□□□ -1.04
COL6A1-201ENST00000361866 UQCR11O14957 56 aa8.55□□□□□ -1.04
COL6A1-201ENST00000361866 MIR22HGQ0VDD5 57 aa8.53□□□□□ -1.04
COL6A1-201ENST00000361866 Q75L30 129 aa8.51□□□□□ -1.05
COL6A1-201ENST00000361866 TYMSOSQ8TAI1 123 aa8.51□□□□□ -1.05
COL6A1-201ENST00000361866 KRTAP7-1Q8IUC3 87 aa8.51□□□□□ -1.05
COL6A1-201ENST00000361866 ZCCHC13Q8WW36 166 aaKnown RBP8.5□□□□□ -1.05
COL6A1-201ENST00000361866 PKD1L1Q8TDX9 2849 aa8.5□□□□□ -1.05
COL6A1-201ENST00000361866 PLA2G1BP04054 148 aaKnown RBP8.49□□□□□ -1.05
COL6A1-201ENST00000361866 BSNQ9UPA5 3926 aa8.48□□□□□ -1.05
COL6A1-201ENST00000361866 IGLV7-43P04211 117 aa8.48□□□□□ -1.05
COL6A1-201ENST00000361866 A8MU10 97 aa8.47□□□□□ -1.05
COL6A1-201ENST00000361866 SSBP3-AS1Q7Z2R9 100 aa8.47□□□□□ -1.05
COL6A1-201ENST00000361866 PANO1I0J062 215 aa8.47□□□□□ -1.05
COL6A1-201ENST00000361866 HRES1P13985 223 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms