RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 HIST1H2BMQ99879 126 aa10.9□□□□□ -0.66
CD47-202ENST00000361309 SSPOA2VEC9 5147 aa10.9□□□□□ -0.67
CD47-202ENST00000361309 TRAV13-2A0A0B4J235 113 aa10.89□□□□□ -0.67
CD47-202ENST00000361309 TRBV7-7A0A0K0K1E9 115 aa10.89□□□□□ -0.67
CD47-202ENST00000361309 Q6ZVH6 145 aa10.89□□□□□ -0.67
CD47-202ENST00000361309 CFC1P0CG37 223 aa10.87□□□□□ -0.67
CD47-202ENST00000361309 ANKRD39Q53RE8 183 aa10.87□□□□□ -0.67
CD47-202ENST00000361309 Q6JHZ5 121 aa10.87□□□□□ -0.67
CD47-202ENST00000361309 KRTAP9-8Q9BYQ0 159 aa10.87□□□□□ -0.67
CD47-202ENST00000361309 IGFL1Q6UW32 110 aa10.86□□□□□ -0.67
CD47-202ENST00000361309 CLEC2BQ92478 149 aa10.86□□□□□ -0.67
CD47-202ENST00000361309 SLC7A5P1Q8MH63 180 aa10.85□□□□□ -0.67
CD47-202ENST00000361309 KRTDAPP60985 99 aa10.84□□□□□ -0.67
CD47-202ENST00000361309 LINC00575Q6W349 94 aa10.84□□□□□ -0.67
CD47-202ENST00000361309 Q6ZQY7 126 aa10.84□□□□□ -0.67
CD47-202ENST00000361309 VAMP3Q15836 100 aa10.83□□□□□ -0.68
CD47-202ENST00000361309 C20orf202A1L168 122 aa10.81□□□□□ -0.68
CD47-202ENST00000361309 Q96NJ1 140 aa10.81□□□□□ -0.68
CD47-202ENST00000361309 hADV29S1A0JD25 119 aa10.8□□□□□ -0.68
CD47-202ENST00000361309 OCIAD2Q56VL3 154 aa10.8□□□□□ -0.68
CD47-202ENST00000361309 ATOH7Q8N100 152 aa10.79□□□□□ -0.68
CD47-202ENST00000361309 LST1O00453 97 aa10.76□□□□□ -0.69
CD47-202ENST00000361309 C20orf166-AS1Q96NR2 134 aa10.73□□□□□ -0.69
CD47-202ENST00000361309 TRBV20-1A0A075B6N2 111 aa10.72□□□□□ -0.69
CD47-202ENST00000361309 FCGBPQ9Y6R7 5405 aaPredicted RBP10.71□□□□□ -0.7
CD47-202ENST00000361309 A8MUU9 505 aa10.7□□□□□ -0.7
CD47-202ENST00000361309 H3BUT2 72 aa10.7□□□□□ -0.7
CD47-202ENST00000361309 COA6Q5JTJ3 125 aaKnown RBP10.7□□□□□ -0.7
CD47-202ENST00000361309 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.7□□□□□ -0.7
CD47-202ENST00000361309 SNHG12Q9BXW3 62 aa10.69□□□□□ -0.7
CD47-202ENST00000361309 A6NJY4 79 aa10.67□□□□□ -0.7
CD47-202ENST00000361309 MT2AP02795 61 aa10.67□□□□□ -0.7
CD47-202ENST00000361309 PPDPFLQ8WWR9 84 aa10.67□□□□□ -0.7
CD47-202ENST00000361309 SS18L2Q9UHA2 77 aa10.65□□□□□ -0.7
CD47-202ENST00000361309 SCGB1D1O95968 90 aa10.64□□□□□ -0.71
CD47-202ENST00000361309 SNRPEP62304 92 aaKnown RBP10.62□□□□□ -0.71
CD47-202ENST00000361309 KRTAP19-1Q8IUB9 90 aa10.62□□□□□ -0.71
CD47-202ENST00000361309 LCE2BO14633 110 aa10.61□□□□□ -0.71
CD47-202ENST00000361309 BVES-AS1Q5T3Y7 98 aa10.61□□□□□ -0.71
CD47-202ENST00000361309 MT1FP04733 61 aa10.59□□□□□ -0.71
CD47-202ENST00000361309 FAM236DA0A1B0GTK5 79 aa10.58□□□□□ -0.72
CD47-202ENST00000361309 FAM236CP0DP71 79 aa10.58□□□□□ -0.72
CD47-202ENST00000361309 DSCR10P59022 87 aa10.58□□□□□ -0.72
CD47-202ENST00000361309 C12orf57Q99622 126 aa10.58□□□□□ -0.72
CD47-202ENST00000361309 TEN1Q86WV5 123 aa10.57□□□□□ -0.72
CD47-202ENST00000361309 KRTAP16-1A8MUX0 517 aa10.56□□□□□ -0.72
CD47-202ENST00000361309 A0A087WSZ3 146 aa10.55□□□□□ -0.72
CD47-202ENST00000361309 KRTAP9-3Q9BYQ3 159 aa10.54□□□□□ -0.72
CD47-202ENST00000361309 SMCPP49901 116 aaPredicted RBP10.53□□□□□ -0.72
CD47-202ENST00000361309 KRTAP10-10P60014 251 aa10.52□□□□□ -0.73
CD47-202ENST00000361309 NDUFV3P56181 108 aaKnown RBP10.51□□□□□ -0.73
CD47-202ENST00000361309 HSBP1L1C9JCN9 74 aa10.5□□□□□ -0.73
CD47-202ENST00000361309 MPLKIPQ8TAP9 179 aa10.48□□□□□ -0.73
CD47-202ENST00000361309 HIST1H4GQ99525 98 aa10.48□□□□□ -0.73
CD47-202ENST00000361309 SIGMAR1Q99720 223 aa10.48□□□□□ -0.73
CD47-202ENST00000361309 RBM12B-AS1Q9P1G2 102 aa10.48□□□□□ -0.73
CD47-202ENST00000361309 HRES1P13985 223 aa10.46□□□□□ -0.73
CD47-202ENST00000361309 LINC00313P59037 77 aa10.46□□□□□ -0.73
CD47-202ENST00000361309 MACF1Q9UPN3 7388 aaKnown RBP10.45□□□□□ -0.74
CD47-202ENST00000361309 H3BMG7 143 aa10.44□□□□□ -0.74
CD47-202ENST00000361309 SNCGO76070 127 aa10.44□□□□□ -0.74
CD47-202ENST00000361309 FAM218AQ96MZ4 157 aa10.44□□□□□ -0.74
CD47-202ENST00000361309 A0A1W2PNM2 257 aa10.41□□□□□ -0.74
CD47-202ENST00000361309 H0YGX0 51 aa10.41□□□□□ -0.74
CD47-202ENST00000361309 SYNE2Q8WXH0 6885 aaKnown RBP10.4□□□□□ -0.74
CD47-202ENST00000361309 HIST1H2BLQ99880 126 aa10.4□□□□□ -0.74
CD47-202ENST00000361309 IGKV4-1P06312 121 aa10.39□□□□□ -0.75
CD47-202ENST00000361309 NOTCH2NLQ7Z3S9 236 aa10.39□□□□□ -0.75
CD47-202ENST00000361309 HIST3H2BBQ8N257 126 aa10.39□□□□□ -0.75
CD47-202ENST00000361309 RAB37Q96AX2 223 aa10.38□□□□□ -0.75
CD47-202ENST00000361309 FABP2P12104 132 aa10.37□□□□□ -0.75
CD47-202ENST00000361309 S100A2P29034 98 aa10.37□□□□□ -0.75
CD47-202ENST00000361309 COX8AP10176 69 aa10.34□□□□□ -0.75
CD47-202ENST00000361309 GHRHP01286 108 aa10.32□□□□□ -0.76
CD47-202ENST00000361309 LINC00846Q9NV44 126 aa10.32□□□□□ -0.76
CD47-202ENST00000361309 A0A0B4J2C4 111 aa10.31□□□□□ -0.76
CD47-202ENST00000361309 DEFB116Q30KQ4 102 aa10.31□□□□□ -0.76
CD47-202ENST00000361309 A0A1B0GX51 115 aa10.3□□□□□ -0.76
CD47-202ENST00000361309 TRBV7-4A0A0J9YYF1 115 aa10.29□□□□□ -0.76
CD47-202ENST00000361309 KRTAP19-6Q3LI70 58 aa10.29□□□□□ -0.76
CD47-202ENST00000361309 IGHV6-1A0A0B4J1U7 121 aa10.28□□□□□ -0.76
CD47-202ENST00000361309 DLEU1O43261 78 aa10.28□□□□□ -0.76
CD47-202ENST00000361309 ANKRD29Q8N6D5 301 aa10.28□□□□□ -0.76
CD47-202ENST00000361309 MTURNQ8N3F0 131 aa10.27□□□□□ -0.77
CD47-202ENST00000361309 LINC00472Q9H8W2 130 aa10.26□□□□□ -0.77
CD47-202ENST00000361309 A0A1B0GV72 72 aa10.25□□□□□ -0.77
CD47-202ENST00000361309 C14orf144Q96I85 54 aa10.22□□□□□ -0.77
CD47-202ENST00000361309 HIGD1BQ9P298 99 aa10.21□□□□□ -0.77
CD47-202ENST00000361309 PRO1854Q9UHT4 67 aa10.2□□□□□ -0.78
CD47-202ENST00000361309 TRIAP1O43715 76 aa10.18□□□□□ -0.78
CD47-202ENST00000361309 CCKP06307 115 aa10.18□□□□□ -0.78
CD47-202ENST00000361309 TRACP01848 142 aa10.17□□□□□ -0.78
CD47-202ENST00000361309 S100A6P06703 90 aa10.17□□□□□ -0.78
CD47-202ENST00000361309 SPINK7P58062 85 aa10.17□□□□□ -0.78
CD47-202ENST00000361309 ORMDL1Q9P0S3 153 aa10.17□□□□□ -0.78
CD47-202ENST00000361309 C8orf87E5RJ46 101 aa10.16□□□□□ -0.78
CD47-202ENST00000361309 C2orf91Q6ZV80 131 aa10.16□□□□□ -0.78
CD47-202ENST00000361309 ZCCHC13Q8WW36 166 aaKnown RBP10.16□□□□□ -0.78
CD47-202ENST00000361309 A0A1B0GVX0 72 aa10.15□□□□□ -0.78
CD47-202ENST00000361309 DNAL4O96015 105 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms