RNA–Protein interactions for RNA: ENST00000359889.9

FAM3A-202, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM3A, Length 1,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-202ENST00000359889 PCP4P48539 62 aa12.88□□□□□ -0.35
FAM3A-202ENST00000359889 ZNF861PO60384 105 aa12.86□□□□□ -0.35
FAM3A-202ENST00000359889 SCXQ7RTU7 201 aa12.85□□□□□ -0.35
FAM3A-202ENST00000359889 IGLV8-61A0A075B6I0 122 aa12.84□□□□□ -0.35
FAM3A-202ENST00000359889 Q6ZVQ6 151 aa12.83□□□□□ -0.36
FAM3A-202ENST00000359889 Q8NBF4 154 aa12.83□□□□□ -0.36
FAM3A-202ENST00000359889 IGKV3D-7A0A0C4DH55 119 aa12.82□□□□□ -0.36
FAM3A-202ENST00000359889 IGLV7-43P04211 117 aa12.81□□□□□ -0.36
FAM3A-202ENST00000359889 SPRR4Q96PI1 79 aa12.81□□□□□ -0.36
FAM3A-202ENST00000359889 FRAS1Q86XX4 4008 aa12.8□□□□□ -0.36
FAM3A-202ENST00000359889 HYDINQ4G0P3 5121 aa12.79□□□□□ -0.36
FAM3A-202ENST00000359889 A0A1W2PNM2 257 aa12.79□□□□□ -0.36
FAM3A-202ENST00000359889 HAMPP81172 84 aa12.79□□□□□ -0.36
FAM3A-202ENST00000359889 DNAH11Q96DT5 4516 aa12.79□□□□□ -0.36
FAM3A-202ENST00000359889 NREPQ16612 68 aa12.78□□□□□ -0.36
FAM3A-202ENST00000359889 IGFL1Q6UW32 110 aa12.77□□□□□ -0.36
FAM3A-202ENST00000359889 LINC00483Q53H64 154 aa12.76□□□□□ -0.37
FAM3A-202ENST00000359889 CRYGAP11844 174 aa12.74□□□□□ -0.37
FAM3A-202ENST00000359889 FAT2Q9NYQ8 4349 aa12.74□□□□□ -0.37
FAM3A-202ENST00000359889 SACSQ9NZJ4 4579 aa12.74□□□□□ -0.37
FAM3A-202ENST00000359889 CXCL6P80162 114 aa12.74□□□□□ -0.37
FAM3A-202ENST00000359889 DNAH5Q8TE73 4624 aa12.72□□□□□ -0.37
FAM3A-202ENST00000359889 HIST1H4AP62805 103 aaKnown RBP12.72□□□□□ -0.37
FAM3A-202ENST00000359889 RPL37AP61513 92 aaKnown RBP12.69□□□□□ -0.38
FAM3A-202ENST00000359889 C9orf153Q5TBE3 101 aa12.69□□□□□ -0.38
FAM3A-202ENST00000359889 DNAH8Q96JB1 4490 aa12.68□□□□□ -0.38
FAM3A-202ENST00000359889 IGLV9-49A0A0B4J1Y8 123 aa12.68□□□□□ -0.38
FAM3A-202ENST00000359889 FAM236AA0A1B0GUQ0 79 aa12.68□□□□□ -0.38
FAM3A-202ENST00000359889 FAM236BA0A1B0GV22 79 aa12.68□□□□□ -0.38
FAM3A-202ENST00000359889 A0A1B0GVY2 172 aa12.67□□□□□ -0.38
FAM3A-202ENST00000359889 PKD1P98161 4303 aa12.66□□□□□ -0.38
FAM3A-202ENST00000359889 A0A0G2JQZ4 141 aa12.65□□□□□ -0.38
FAM3A-202ENST00000359889 BPY2O14599 106 aa12.65□□□□□ -0.38
FAM3A-202ENST00000359889 ANAPC13Q9BS18 74 aa12.65□□□□□ -0.38
FAM3A-202ENST00000359889 A0A087WSZ3 146 aa12.62□□□□□ -0.39
FAM3A-202ENST00000359889 A0A087WVE0 104 aa12.6□□□□□ -0.39
FAM3A-202ENST00000359889 MOBPQ13875 183 aa12.59□□□□□ -0.39
FAM3A-202ENST00000359889 ANAPC11Q9NYG5 84 aa12.58□□□□□ -0.4
FAM3A-202ENST00000359889 ATOX1O00244 68 aa12.56□□□□□ -0.4
FAM3A-202ENST00000359889 SRRM2Q9UQ35 2752 aaKnown RBP12.53□□□□□ -0.4
FAM3A-202ENST00000359889 RYR2Q92736 4967 aa12.5□□□□□ -0.41
FAM3A-202ENST00000359889 SSBP3-AS1Q7Z2R9 100 aa12.5□□□□□ -0.41
FAM3A-202ENST00000359889 FAM229BQ4G0N7 80 aa12.49□□□□□ -0.41
FAM3A-202ENST00000359889 SS18L2Q9UHA2 77 aa12.49□□□□□ -0.41
FAM3A-202ENST00000359889 IGKV4-1P06312 121 aa12.47□□□□□ -0.41
FAM3A-202ENST00000359889 Q8N9L7 120 aa12.47□□□□□ -0.41
FAM3A-202ENST00000359889 HRCT1Q6UXD1 115 aa12.45□□□□□ -0.42
FAM3A-202ENST00000359889 LRP1BQ9NZR2 4599 aa12.44□□□□□ -0.42
FAM3A-202ENST00000359889 DSCR10P59022 87 aa12.44□□□□□ -0.42
FAM3A-202ENST00000359889 SPINK6Q6UWN8 80 aa12.44□□□□□ -0.42
FAM3A-202ENST00000359889 J3KT08 172 aa12.42□□□□□ -0.42
FAM3A-202ENST00000359889 CD164Q04900 197 aa12.42□□□□□ -0.42
FAM3A-202ENST00000359889 SMR3BP02814 79 aaPredicted RBP12.41□□□□□ -0.42
FAM3A-202ENST00000359889 DEFB116Q30KQ4 102 aa12.41□□□□□ -0.42
FAM3A-202ENST00000359889 LINC00472Q9H8W2 130 aa12.41□□□□□ -0.42
FAM3A-202ENST00000359889 SMIM20Q8N5G0 67 aa12.4□□□□□ -0.43
FAM3A-202ENST00000359889 K7EQZ3 153 aa12.38□□□□□ -0.43
FAM3A-202ENST00000359889 SERP2Q8N6R1 65 aa12.37□□□□□ -0.43
FAM3A-202ENST00000359889 DYNC1H1Q14204 4646 aaKnown RBP12.37□□□□□ -0.43
FAM3A-202ENST00000359889 KMT2CQ8NEZ4 4911 aaKnown RBP12.37□□□□□ -0.43
FAM3A-202ENST00000359889 A0A087X002 238 aa12.37□□□□□ -0.43
FAM3A-202ENST00000359889 PLA2G1BP04054 148 aaKnown RBP12.36□□□□□ -0.43
FAM3A-202ENST00000359889 KRTAP1-4P0C5Y4 121 aa12.36□□□□□ -0.43
FAM3A-202ENST00000359889 UQCRQO14949 82 aa12.34□□□□□ -0.43
FAM3A-202ENST00000359889 COX7CP15954 63 aa12.34□□□□□ -0.43
FAM3A-202ENST00000359889 PKHD1P08F94 4074 aa12.34□□□□□ -0.43
FAM3A-202ENST00000359889 A8MWP4 228 aa12.34□□□□□ -0.43
FAM3A-202ENST00000359889 NDUFB1O75438 58 aa12.33□□□□□ -0.44
FAM3A-202ENST00000359889 KRTAP13-2Q52LG2 175 aa12.33□□□□□ -0.44
FAM3A-202ENST00000359889 CCDC179H3BU77 68 aa12.31□□□□□ -0.44
FAM3A-202ENST00000359889 TRAV7A0A075B6U4 112 aa12.3□□□□□ -0.44
FAM3A-202ENST00000359889 PRR15Q8IV56 129 aa12.3□□□□□ -0.44
FAM3A-202ENST00000359889 HCG22E2RYF7 251 aa12.29□□□□□ -0.44
FAM3A-202ENST00000359889 CDK2AP2O75956 126 aa12.29□□□□□ -0.44
FAM3A-202ENST00000359889 Q96NJ1 140 aa12.28□□□□□ -0.44
FAM3A-202ENST00000359889 TYMSOSQ8TAI1 123 aa12.27□□□□□ -0.45
FAM3A-202ENST00000359889 C4orf48Q5BLP8 95 aa12.26□□□□□ -0.45
FAM3A-202ENST00000359889 FAM229AH3BQW9 127 aa12.25□□□□□ -0.45
FAM3A-202ENST00000359889 ASB16-AS1Q495Z4 193 aa12.23□□□□□ -0.45
FAM3A-202ENST00000359889 VPS13BQ7Z7G8 4022 aa12.22□□□□□ -0.45
FAM3A-202ENST00000359889 KRTAP10-4P60372 401 aaPredicted RBP12.22□□□□□ -0.45
FAM3A-202ENST00000359889 LIMD2Q9BT23 127 aa12.22□□□□□ -0.45
FAM3A-202ENST00000359889 Q5XG85 94 aa12.21□□□□□ -0.45
FAM3A-202ENST00000359889 APOBP04114 4563 aaKnown RBP12.21□□□□□ -0.46
FAM3A-202ENST00000359889 WFDC13Q8IUB5 93 aa12.19□□□□□ -0.46
FAM3A-202ENST00000359889 CASC2Q6XLA1 102 aa12.18□□□□□ -0.46
FAM3A-202ENST00000359889 PRR26Q8N8Z3 221 aa12.17□□□□□ -0.46
FAM3A-202ENST00000359889 OCR1Q9BZK8 76 aa12.17□□□□□ -0.46
FAM3A-202ENST00000359889 A0A1B0GVX0 72 aa12.16□□□□□ -0.46
FAM3A-202ENST00000359889 SPINK1P00995 79 aa12.16□□□□□ -0.46
FAM3A-202ENST00000359889 SPAG11AQ6PDA7 123 aa12.14□□□□□ -0.47
FAM3A-202ENST00000359889 IGHV6-1A0A0B4J1U7 121 aa12.12□□□□□ -0.47
FAM3A-202ENST00000359889 KRTAP29-1A8MX34 341 aaPredicted RBP12.12□□□□□ -0.47
FAM3A-202ENST00000359889 LINC00304Q8N9R0 145 aa12.12□□□□□ -0.47
FAM3A-202ENST00000359889 MMP24-AS1A0A0U1RRL7 71 aa12.11□□□□□ -0.47
FAM3A-202ENST00000359889 C20orf197Q8N268 126 aa12.11□□□□□ -0.47
FAM3A-202ENST00000359889 C8orf17Q9NRJ1 99 aa12.11□□□□□ -0.47
FAM3A-202ENST00000359889 hDV103S1A0JD37 113 aa12.09□□□□□ -0.47
FAM3A-202ENST00000359889 RYR3Q15413 4870 aa12.09□□□□□ -0.47
FAM3A-202ENST00000359889 RPS29P62273 56 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms