RNA–Protein interactions for RNA: ENST00000358994.8

PTPA-206, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-206ENST00000358994 LIMD2Q9BT23 127 aa11.5□□□□□ -0.57
PTPA-206ENST00000358994 LINC00588Q9Y4M8 146 aa11.5□□□□□ -0.57
PTPA-206ENST00000358994 KRTAP29-1A8MX34 341 aaPredicted RBP11.5□□□□□ -0.57
PTPA-206ENST00000358994 RPL37AP61513 92 aaKnown RBP11.5□□□□□ -0.57
PTPA-206ENST00000358994 PRR15LQ9BU68 103 aa11.49□□□□□ -0.57
PTPA-206ENST00000358994 H0Y9P7 68 aa11.48□□□□□ -0.57
PTPA-206ENST00000358994 H3BNG1 76 aa11.47□□□□□ -0.57
PTPA-206ENST00000358994 A0A087WSZ3 146 aa11.47□□□□□ -0.57
PTPA-206ENST00000358994 TENM1Q9UKZ4 2725 aa11.47□□□□□ -0.57
PTPA-206ENST00000358994 LINC01556Q5JQF7 62 aa11.45□□□□□ -0.58
PTPA-206ENST00000358994 LCA10Q71F78 164 aa11.44□□□□□ -0.58
PTPA-206ENST00000358994 MRPL55Q7Z7F7 128 aaKnown RBP11.44□□□□□ -0.58
PTPA-206ENST00000358994 KTN1-AS1Q86SY8 53 aa11.44□□□□□ -0.58
PTPA-206ENST00000358994 SPTSSBQ8NFR3 76 aa11.43□□□□□ -0.58
PTPA-206ENST00000358994 STAB1Q9NY15 2570 aa11.43□□□□□ -0.58
PTPA-206ENST00000358994 RETNQ9HD89 108 aa11.43□□□□□ -0.58
PTPA-206ENST00000358994 H3BPC8 53 aa11.42□□□□□ -0.58
PTPA-206ENST00000358994 C9orf163Q8N9P6 203 aa11.42□□□□□ -0.58
PTPA-206ENST00000358994 CASC2Q6XLA1 102 aa11.41□□□□□ -0.58
PTPA-206ENST00000358994 REG3GQ6UW15 175 aa11.4□□□□□ -0.58
PTPA-206ENST00000358994 CNBPP62633 177 aaKnown RBP11.39□□□□□ -0.59
PTPA-206ENST00000358994 Q75L30 129 aa11.39□□□□□ -0.59
PTPA-206ENST00000358994 TRRAPQ9Y4A5 3859 aa11.39□□□□□ -0.59
PTPA-206ENST00000358994 CASC10Q5T4H9 136 aa11.39□□□□□ -0.59
PTPA-206ENST00000358994 ATP11AUNQ6ZP68 121 aa11.38□□□□□ -0.59
PTPA-206ENST00000358994 RBM12B-AS1Q9P1G2 102 aa11.38□□□□□ -0.59
PTPA-206ENST00000358994 IGLV8-61A0A075B6I0 122 aa11.36□□□□□ -0.59
PTPA-206ENST00000358994 LOC101927531A0A1B0GV80 90 aa11.36□□□□□ -0.59
PTPA-206ENST00000358994 A6NED7 52 aa11.36□□□□□ -0.59
PTPA-206ENST00000358994 COA5Q86WW8 74 aa11.36□□□□□ -0.59
PTPA-206ENST00000358994 A6NN06 94 aa11.33□□□□□ -0.59
PTPA-206ENST00000358994 PRLHP81277 87 aa11.33□□□□□ -0.59
PTPA-206ENST00000358994 DNAH10OSP0CZ25 163 aa11.31□□□□□ -0.6
PTPA-206ENST00000358994 IGLV7-46A0A075B6I9 117 aa11.3□□□□□ -0.6
PTPA-206ENST00000358994 A8MWP4 228 aa11.3□□□□□ -0.6
PTPA-206ENST00000358994 PHF5AQ7RTV0 110 aaKnown RBP11.29□□□□□ -0.6
PTPA-206ENST00000358994 LINC00472Q9H8W2 130 aa11.28□□□□□ -0.6
PTPA-206ENST00000358994 TENM3Q9P273 2699 aa11.28□□□□□ -0.6
PTPA-206ENST00000358994 CDC42SE1Q9NRR8 79 aa11.28□□□□□ -0.6
PTPA-206ENST00000358994 NDUFS5O43920 106 aa11.27□□□□□ -0.61
PTPA-206ENST00000358994 DNHD1Q96M86 4753 aa11.27□□□□□ -0.61
PTPA-206ENST00000358994 DEFB131BA0A096LNP1 70 aa11.26□□□□□ -0.61
PTPA-206ENST00000358994 DNAH1Q9P2D7 4330 aa11.25□□□□□ -0.61
PTPA-206ENST00000358994 SRRM2Q9UQ35 2752 aaKnown RBP11.23□□□□□ -0.61
PTPA-206ENST00000358994 PCOTHQ58A44 107 aa11.23□□□□□ -0.61
PTPA-206ENST00000358994 MMP24-AS1A0A0U1RRL7 71 aa11.22□□□□□ -0.61
PTPA-206ENST00000358994 SPAG11AQ6PDA7 123 aa11.22□□□□□ -0.61
PTPA-206ENST00000358994 PLAC8Q9NZF1 115 aa11.21□□□□□ -0.61
PTPA-206ENST00000358994 LINC01558Q9Y6Z2 57 aa11.21□□□□□ -0.61
PTPA-206ENST00000358994 H0Y9J4 135 aa11.2□□□□□ -0.62
PTPA-206ENST00000358994 MOBPQ13875 183 aa11.2□□□□□ -0.62
PTPA-206ENST00000358994 ANK2Q01484 3957 aa11.16□□□□□ -0.62
PTPA-206ENST00000358994 A0A096LNI7 61 aa11.16□□□□□ -0.62
PTPA-206ENST00000358994 C7orf65Q6ZTY9 151 aa11.16□□□□□ -0.62
PTPA-206ENST00000358994 IGKV2-24A0A0C4DH68 120 aa11.16□□□□□ -0.62
PTPA-206ENST00000358994 C11orf45Q8TAV5 145 aa11.16□□□□□ -0.62
PTPA-206ENST00000358994 MDFIQ99750 246 aa11.16□□□□□ -0.62
PTPA-206ENST00000358994 TENM2Q9NT68 2774 aa11.16□□□□□ -0.62
PTPA-206ENST00000358994 NBEAL1Q6ZS30 2694 aa11.15□□□□□ -0.62
PTPA-206ENST00000358994 SPINK7P58062 85 aa11.14□□□□□ -0.63
PTPA-206ENST00000358994 KRTAP24-1Q3LI83 254 aa11.13□□□□□ -0.63
PTPA-206ENST00000358994 SPRR1BP22528 89 aa11.13□□□□□ -0.63
PTPA-206ENST00000358994 KRTAP11-1Q8IUC1 163 aa11.13□□□□□ -0.63
PTPA-206ENST00000358994 OXLD1Q5BKU9 147 aa11.12□□□□□ -0.63
PTPA-206ENST00000358994 KRTAP10-11P60412 298 aa11.11□□□□□ -0.63
PTPA-206ENST00000358994 MGAM2Q2M2H8 2515 aa11.11□□□□□ -0.63
PTPA-206ENST00000358994 NOTCH1P46531 2555 aa11.1□□□□□ -0.63
PTPA-206ENST00000358994 HRES1P13985 223 aa11.09□□□□□ -0.63
PTPA-206ENST00000358994 ASB16-AS1Q495Z4 193 aa11.09□□□□□ -0.63
PTPA-206ENST00000358994 CSMD3Q7Z407 3707 aa11.08□□□□□ -0.64
PTPA-206ENST00000358994 Q6ZR54 194 aa11.07□□□□□ -0.64
PTPA-206ENST00000358994 TP53AIP1Q9HCN2 124 aa11.07□□□□□ -0.64
PTPA-206ENST00000358994 DNAH10Q8IVF4 4471 aa11.05□□□□□ -0.64
PTPA-206ENST00000358994 Q96NJ1 140 aa11.05□□□□□ -0.64
PTPA-206ENST00000358994 C8orf17Q9NRJ1 99 aa11.01□□□□□ -0.65
PTPA-206ENST00000358994 CHTF8P0CG12 524 aa11□□□□□ -0.65
PTPA-206ENST00000358994 PRR26Q8N8Z3 221 aa10.95□□□□□ -0.66
PTPA-206ENST00000358994 IGHV6-1A0A0B4J1U7 121 aa10.93□□□□□ -0.66
PTPA-206ENST00000358994 LINC00313P59037 77 aa10.92□□□□□ -0.66
PTPA-206ENST00000358994 KRTAP1-5Q9BYS1 174 aa10.92□□□□□ -0.66
PTPA-206ENST00000358994 IGLV9-49A0A0B4J1Y8 123 aa10.91□□□□□ -0.66
PTPA-206ENST00000358994 A0A1B0GVX0 72 aa10.91□□□□□ -0.66
PTPA-206ENST00000358994 LYSTQ99698 3801 aa10.9□□□□□ -0.66
PTPA-206ENST00000358994 PRAC1Q96KF2 57 aa10.9□□□□□ -0.66
PTPA-206ENST00000358994 C8orf87E5RJ46 101 aa10.9□□□□□ -0.67
PTPA-206ENST00000358994 MRPL34Q9BQ48 92 aaKnown RBP10.9□□□□□ -0.67
PTPA-206ENST00000358994 A0A087X002 238 aa10.88□□□□□ -0.67
PTPA-206ENST00000358994 K7EIL1 84 aa10.88□□□□□ -0.67
PTPA-206ENST00000358994 NOTCH2NLQ7Z3S9 236 aa10.88□□□□□ -0.67
PTPA-206ENST00000358994 COL7A1Q02388 2944 aa10.88□□□□□ -0.67
PTPA-206ENST00000358994 DNAH9Q9NYC9 4486 aa10.88□□□□□ -0.67
PTPA-206ENST00000358994 CMYA5Q8N3K9 4069 aa10.88□□□□□ -0.67
PTPA-206ENST00000358994 KRTAP13-1Q8IUC0 172 aa10.87□□□□□ -0.67
PTPA-206ENST00000358994 ALMS1Q8TCU4 4167 aa10.85□□□□□ -0.67
PTPA-206ENST00000358994 ADM2Q7Z4H4 148 aa10.84□□□□□ -0.67
PTPA-206ENST00000358994 Q5W150 140 aa10.81□□□□□ -0.68
PTPA-206ENST00000358994 CDK2AP2O75956 126 aa10.8□□□□□ -0.68
PTPA-206ENST00000358994 PANO1I0J062 215 aa10.79□□□□□ -0.68
PTPA-206ENST00000358994 MEGF8Q7Z7M0 2845 aa10.78□□□□□ -0.68
PTPA-206ENST00000358994 DNAH3Q8TD57 4116 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms