RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 ZNF73O43830 326 aaPredicted RBP8.09□□□□□ -1.11
GGPS1-202ENST00000358966 NKAPP1Q8N9T2 125 aa8.09□□□□□ -1.11
GGPS1-202ENST00000358966 C7orf33Q8WU49 177 aa8.09□□□□□ -1.11
GGPS1-202ENST00000358966 C8orf87E5RJ46 101 aa8.09□□□□□ -1.12
GGPS1-202ENST00000358966 KRTAP21-3Q3LHN1 58 aa8.08□□□□□ -1.12
GGPS1-202ENST00000358966 LOC110117498A0A087WWA1 95 aa8.08□□□□□ -1.12
GGPS1-202ENST00000358966 OCR1Q9BZK8 76 aa8.08□□□□□ -1.12
GGPS1-202ENST00000358966 LY6G6CO95867 125 aa8.07□□□□□ -1.12
GGPS1-202ENST00000358966 TLX1NBP0CAT3 122 aa8.07□□□□□ -1.12
GGPS1-202ENST00000358966 C16orf90A8MZG2 172 aa8.07□□□□□ -1.12
GGPS1-202ENST00000358966 DIRC1Q969H9 104 aa8.07□□□□□ -1.12
GGPS1-202ENST00000358966 DNAH6Q9C0G6 4158 aa8.06□□□□□ -1.12
GGPS1-202ENST00000358966 LINC00575Q6W349 94 aa8.06□□□□□ -1.12
GGPS1-202ENST00000358966 Q8N9L7 120 aa8.06□□□□□ -1.12
GGPS1-202ENST00000358966 NDUFS5O43920 106 aa8.05□□□□□ -1.12
GGPS1-202ENST00000358966 Q5VV11 94 aa8.05□□□□□ -1.12
GGPS1-202ENST00000358966 A0A1W2PNN7 141 aa8.04□□□□□ -1.12
GGPS1-202ENST00000358966 Q6ZQY7 126 aa8.04□□□□□ -1.12
GGPS1-202ENST00000358966 PANO1I0J062 215 aa8.04□□□□□ -1.12
GGPS1-202ENST00000358966 FRAS1Q86XX4 4008 aa8.03□□□□□ -1.12
GGPS1-202ENST00000358966 CNBPP62633 177 aaKnown RBP8.03□□□□□ -1.12
GGPS1-202ENST00000358966 COX7BP24311 80 aa8.02□□□□□ -1.13
GGPS1-202ENST00000358966 CHKB-CPT1BH3BT56 60 aa8.01□□□□□ -1.13
GGPS1-202ENST00000358966 ELOF1P60002 83 aaKnown RBP8.01□□□□□ -1.13
GGPS1-202ENST00000358966 PHF5AQ7RTV0 110 aaKnown RBP8.01□□□□□ -1.13
GGPS1-202ENST00000358966 UBE2AP49459 152 aa8.01□□□□□ -1.13
GGPS1-202ENST00000358966 PRR4Q16378 134 aa8.01□□□□□ -1.13
GGPS1-202ENST00000358966 DNAH17Q9UFH2 4485 aa8□□□□□ -1.13
GGPS1-202ENST00000358966 A6NN06 94 aa8□□□□□ -1.13
GGPS1-202ENST00000358966 HCG22E2RYF7 251 aa8□□□□□ -1.13
GGPS1-202ENST00000358966 Q6ZR54 194 aa8□□□□□ -1.13
GGPS1-202ENST00000358966 KRTAP11-1Q8IUC1 163 aa7.99□□□□□ -1.13
GGPS1-202ENST00000358966 IGLV1-50A0A075B6I6 118 aa7.99□□□□□ -1.13
GGPS1-202ENST00000358966 LINC00528Q8N1L1 170 aa7.99□□□□□ -1.13
GGPS1-202ENST00000358966 KCNQ1DNQ9H478 68 aa7.99□□□□□ -1.13
GGPS1-202ENST00000358966 A0A087WTM6 91 aa7.98□□□□□ -1.13
GGPS1-202ENST00000358966 IGKV4-1P06312 121 aa7.98□□□□□ -1.13
GGPS1-202ENST00000358966 ATP11AUNQ6ZP68 121 aa7.98□□□□□ -1.13
GGPS1-202ENST00000358966 WWC2-AS2Q96NR7 200 aa7.98□□□□□ -1.13
GGPS1-202ENST00000358966 C9orf163Q8N9P6 203 aa7.97□□□□□ -1.13
GGPS1-202ENST00000358966 C14orf177Q52M58 125 aa7.97□□□□□ -1.13
GGPS1-202ENST00000358966 PLA2G2DQ9UNK4 145 aa7.97□□□□□ -1.13
GGPS1-202ENST00000358966 PDE6GP18545 87 aa7.96□□□□□ -1.13
GGPS1-202ENST00000358966 LCA10Q71F78 164 aa7.96□□□□□ -1.13
GGPS1-202ENST00000358966 DEFB105AQ8NG35 78 aa7.96□□□□□ -1.13
GGPS1-202ENST00000358966 LINC00476Q8WZB0 136 aa7.96□□□□□ -1.13
GGPS1-202ENST00000358966 Q9BRP9 147 aa7.96□□□□□ -1.13
GGPS1-202ENST00000358966 FAM30AQ9NZY2 134 aa7.96□□□□□ -1.13
GGPS1-202ENST00000358966 DNAH11Q96DT5 4516 aa7.96□□□□□ -1.14
GGPS1-202ENST00000358966 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.96□□□□□ -1.14
GGPS1-202ENST00000358966 DNAH8Q96JB1 4490 aa7.96□□□□□ -1.14
GGPS1-202ENST00000358966 C7orf65Q6ZTY9 151 aa7.95□□□□□ -1.14
GGPS1-202ENST00000358966 IGLV5-37A0A075B6J1 123 aa7.95□□□□□ -1.14
GGPS1-202ENST00000358966 DNAH5Q8TE73 4624 aa7.95□□□□□ -1.14
GGPS1-202ENST00000358966 KRTAP4-16G5E9R7 235 aaPredicted RBP7.94□□□□□ -1.14
GGPS1-202ENST00000358966 PRLHP81277 87 aa7.94□□□□□ -1.14
GGPS1-202ENST00000358966 SACSQ9NZJ4 4579 aa7.94□□□□□ -1.14
GGPS1-202ENST00000358966 FAT2Q9NYQ8 4349 aa7.94□□□□□ -1.14
GGPS1-202ENST00000358966 C1orf134Q5TEV5 83 aa7.94□□□□□ -1.14
GGPS1-202ENST00000358966 ST20-AS1Q8NBB2 130 aa7.94□□□□□ -1.14
GGPS1-202ENST00000358966 TNP2Q05952 138 aa7.93□□□□□ -1.14
GGPS1-202ENST00000358966 ETDCA0A1B0GVM5 59 aa7.93□□□□□ -1.14
GGPS1-202ENST00000358966 Q6ZRX8 168 aa7.93□□□□□ -1.14
GGPS1-202ENST00000358966 RTL8CO15255 209 aa7.92□□□□□ -1.14
GGPS1-202ENST00000358966 PRR15LQ9BU68 103 aa7.91□□□□□ -1.14
GGPS1-202ENST00000358966 CYP4F30PQ9H0H9 118 aa7.91□□□□□ -1.14
GGPS1-202ENST00000358966 ALMS1Q8TCU4 4167 aa7.91□□□□□ -1.14
GGPS1-202ENST00000358966 PKHD1P08F94 4074 aa7.91□□□□□ -1.14
GGPS1-202ENST00000358966 SPRR1AP35321 89 aa7.91□□□□□ -1.14
GGPS1-202ENST00000358966 REG3GQ6UW15 175 aa7.91□□□□□ -1.14
GGPS1-202ENST00000358966 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.91□□□□□ -1.14
GGPS1-202ENST00000358966 SMIM29Q86T20 159 aa7.9□□□□□ -1.14
GGPS1-202ENST00000358966 PRR26Q8N8Z3 221 aa7.9□□□□□ -1.14
GGPS1-202ENST00000358966 PKD1P98161 4303 aa7.89□□□□□ -1.15
GGPS1-202ENST00000358966 A6NED7 52 aa7.89□□□□□ -1.15
GGPS1-202ENST00000358966 ZCCHC13Q8WW36 166 aaKnown RBP7.89□□□□□ -1.15
GGPS1-202ENST00000358966 Q8N9P0 234 aaPredicted RBP7.88□□□□□ -1.15
GGPS1-202ENST00000358966 LCE6AA0A183 80 aa7.88□□□□□ -1.15
GGPS1-202ENST00000358966 KRTAP10-2P60368 255 aa7.87□□□□□ -1.15
GGPS1-202ENST00000358966 Q8N377 158 aa7.87□□□□□ -1.15
GGPS1-202ENST00000358966 KMT2CQ8NEZ4 4911 aaKnown RBP7.87□□□□□ -1.15
GGPS1-202ENST00000358966 LIMD2Q9BT23 127 aa7.87□□□□□ -1.15
GGPS1-202ENST00000358966 IGLV5-52A0A0A0MRZ9 124 aa7.86□□□□□ -1.15
GGPS1-202ENST00000358966 SPACA4Q8TDM5 124 aa7.86□□□□□ -1.15
GGPS1-202ENST00000358966 A0A0G2JQZ4 141 aa7.84□□□□□ -1.15
GGPS1-202ENST00000358966 DHRS4-AS1Q9P1J3 65 aa7.83□□□□□ -1.16
GGPS1-202ENST00000358966 MOBPQ13875 183 aa7.82□□□□□ -1.16
GGPS1-202ENST00000358966 Q75L30 129 aa7.82□□□□□ -1.16
GGPS1-202ENST00000358966 CDC42SE1Q9NRR8 79 aa7.81□□□□□ -1.16
GGPS1-202ENST00000358966 C3orf84H3BNL1 204 aa7.81□□□□□ -1.16
GGPS1-202ENST00000358966 LRP1BQ9NZR2 4599 aa7.81□□□□□ -1.16
GGPS1-202ENST00000358966 PRAC1Q96KF2 57 aa7.79□□□□□ -1.16
GGPS1-202ENST00000358966 H3BQ85 93 aa7.78□□□□□ -1.16
GGPS1-202ENST00000358966 LINC00208Q96KT6 92 aa7.77□□□□□ -1.17
GGPS1-202ENST00000358966 IGLV5-48A0A075B6I7 105 aa7.76□□□□□ -1.17
GGPS1-202ENST00000358966 LINC00313P59037 77 aa7.76□□□□□ -1.17
GGPS1-202ENST00000358966 LINC01554Q52M75 96 aa7.76□□□□□ -1.17
GGPS1-202ENST00000358966 NDUFB1O75438 58 aa7.75□□□□□ -1.17
GGPS1-202ENST00000358966 PSORS1C2Q9UIG4 136 aa7.75□□□□□ -1.17
GGPS1-202ENST00000358966 LOC101927531A0A1B0GV80 90 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms