RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 IGKV4-1P06312 121 aa9.04□□□□□ -0.96
NIPAL3-203ENST00000358028 PKD1P98161 4303 aa9.03□□□□□ -0.96
NIPAL3-203ENST00000358028 PKHD1P08F94 4074 aa9.03□□□□□ -0.96
NIPAL3-203ENST00000358028 IGKV2-24A0A0C4DH68 120 aa9.03□□□□□ -0.96
NIPAL3-203ENST00000358028 ERC2-IT1O76042 136 aa9.03□□□□□ -0.96
NIPAL3-203ENST00000358028 C1orf137Q5JT78 98 aa9.03□□□□□ -0.96
NIPAL3-203ENST00000358028 ST20-AS1Q8NBB2 130 aa9.03□□□□□ -0.96
NIPAL3-203ENST00000358028 HERC2O95714 4834 aa9.03□□□□□ -0.96
NIPAL3-203ENST00000358028 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.02□□□□□ -0.97
NIPAL3-203ENST00000358028 UBE2BP63146 152 aa9.02□□□□□ -0.97
NIPAL3-203ENST00000358028 Q8NBF4 154 aa9.02□□□□□ -0.97
NIPAL3-203ENST00000358028 A0A1W2PNN7 141 aa9.01□□□□□ -0.97
NIPAL3-203ENST00000358028 C1orf134Q5TEV5 83 aa9.01□□□□□ -0.97
NIPAL3-203ENST00000358028 A0A1W2PNM2 257 aa9.01□□□□□ -0.97
NIPAL3-203ENST00000358028 SPRR4Q96PI1 79 aa9.01□□□□□ -0.97
NIPAL3-203ENST00000358028 NDUFC1O43677 76 aa9□□□□□ -0.97
NIPAL3-203ENST00000358028 DNAH11Q96DT5 4516 aa8.99□□□□□ -0.97
NIPAL3-203ENST00000358028 H7BZZ5 65 aa8.99□□□□□ -0.97
NIPAL3-203ENST00000358028 KIAA1109Q2LD37 5005 aa8.99□□□□□ -0.97
NIPAL3-203ENST00000358028 FAM236DA0A1B0GTK5 79 aa8.98□□□□□ -0.97
NIPAL3-203ENST00000358028 FAM236CP0DP71 79 aa8.98□□□□□ -0.97
NIPAL3-203ENST00000358028 PKIGQ9Y2B9 76 aa8.98□□□□□ -0.97
NIPAL3-203ENST00000358028 LRCOL1A6NCL2 159 aa8.97□□□□□ -0.97
NIPAL3-203ENST00000358028 F8WEM9 126 aa8.97□□□□□ -0.97
NIPAL3-203ENST00000358028 LINC00336Q6ZUF6 198 aa8.97□□□□□ -0.97
NIPAL3-203ENST00000358028 SMIM29Q86T20 159 aa8.96□□□□□ -0.98
NIPAL3-203ENST00000358028 Q8N9L7 120 aa8.96□□□□□ -0.98
NIPAL3-203ENST00000358028 DYNC1H1Q14204 4646 aaKnown RBP8.95□□□□□ -0.98
NIPAL3-203ENST00000358028 CHTF8P0CG12 524 aa8.95□□□□□ -0.98
NIPAL3-203ENST00000358028 Q6ZRN7 208 aaPredicted RBP8.95□□□□□ -0.98
NIPAL3-203ENST00000358028 C9orf163Q8N9P6 203 aa8.95□□□□□ -0.98
NIPAL3-203ENST00000358028 OCR1Q9BZK8 76 aa8.94□□□□□ -0.98
NIPAL3-203ENST00000358028 IGLV8-61A0A075B6I0 122 aa8.94□□□□□ -0.98
NIPAL3-203ENST00000358028 A0A1B0GVY2 172 aa8.94□□□□□ -0.98
NIPAL3-203ENST00000358028 PRLHP81277 87 aa8.94□□□□□ -0.98
NIPAL3-203ENST00000358028 ATP5EP56381 51 aaPredicted RBP8.93□□□□□ -0.98
NIPAL3-203ENST00000358028 PHF5AQ7RTV0 110 aaKnown RBP8.93□□□□□ -0.98
NIPAL3-203ENST00000358028 TMEM254Q8TBM7 123 aa8.92□□□□□ -0.98
NIPAL3-203ENST00000358028 SNURFQ9Y675 71 aa8.92□□□□□ -0.98
NIPAL3-203ENST00000358028 SERP1Q9Y6X1 66 aa8.92□□□□□ -0.98
NIPAL3-203ENST00000358028 H0Y9J4 135 aa8.91□□□□□ -0.98
NIPAL3-203ENST00000358028 EPM2AB3EWF7 344 aa8.9□□□□□ -0.98
NIPAL3-203ENST00000358028 KRTAP11-1Q8IUC1 163 aa8.9□□□□□ -0.98
NIPAL3-203ENST00000358028 PCLOQ9Y6V0 5065 aa8.89□□□□□ -0.99
NIPAL3-203ENST00000358028 OXTP01178 125 aa8.89□□□□□ -0.99
NIPAL3-203ENST00000358028 HIGD2AQ9BW72 106 aa8.89□□□□□ -0.99
NIPAL3-203ENST00000358028 LINC00474Q9P2X8 69 aa8.89□□□□□ -0.99
NIPAL3-203ENST00000358028 DNAH5Q8TE73 4624 aa8.88□□□□□ -0.99
NIPAL3-203ENST00000358028 IGFL1Q6UW32 110 aa8.88□□□□□ -0.99
NIPAL3-203ENST00000358028 A0A0U1RQV1 116 aa8.87□□□□□ -0.99
NIPAL3-203ENST00000358028 SPRR1BP22528 89 aa8.87□□□□□ -0.99
NIPAL3-203ENST00000358028 DSCR10P59022 87 aa8.87□□□□□ -0.99
NIPAL3-203ENST00000358028 PANO1I0J062 215 aa8.84□□□□□ -0.99
NIPAL3-203ENST00000358028 UBE2AP49459 152 aa8.84□□□□□ -0.99
NIPAL3-203ENST00000358028 RYR1P21817 5038 aa8.84□□□□□ -0.99
NIPAL3-203ENST00000358028 A0A087WTM6 91 aa8.84□□□□□ -1
NIPAL3-203ENST00000358028 KRTAP10-2P60368 255 aa8.83□□□□□ -1
NIPAL3-203ENST00000358028 LRP1BQ9NZR2 4599 aa8.82□□□□□ -1
NIPAL3-203ENST00000358028 KRTAP17-1Q9BYP8 105 aa8.82□□□□□ -1
NIPAL3-203ENST00000358028 K7EQZ3 153 aa8.81□□□□□ -1
NIPAL3-203ENST00000358028 SPACA4Q8TDM5 124 aa8.81□□□□□ -1
NIPAL3-203ENST00000358028 A0A0G2JQZ4 141 aa8.81□□□□□ -1
NIPAL3-203ENST00000358028 HCG22E2RYF7 251 aa8.8□□□□□ -1
NIPAL3-203ENST00000358028 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.8□□□□□ -1
NIPAL3-203ENST00000358028 HSPG2P98160 4391 aa8.79□□□□□ -1
NIPAL3-203ENST00000358028 Q5XG85 94 aa8.78□□□□□ -1
NIPAL3-203ENST00000358028 FAM30AQ9NZY2 134 aa8.78□□□□□ -1
NIPAL3-203ENST00000358028 A0A087WSZ3 146 aa8.78□□□□□ -1
NIPAL3-203ENST00000358028 KRTAP13-1Q8IUC0 172 aa8.77□□□□□ -1.01
NIPAL3-203ENST00000358028 SMIM26A0A096LP01 95 aa8.76□□□□□ -1.01
NIPAL3-203ENST00000358028 C5orf47Q569G3 176 aa8.76□□□□□ -1.01
NIPAL3-203ENST00000358028 APOBP04114 4563 aaKnown RBP8.76□□□□□ -1.01
NIPAL3-203ENST00000358028 ABCA13Q86UQ4 5058 aa8.75□□□□□ -1.01
NIPAL3-203ENST00000358028 ZCCHC13Q8WW36 166 aaKnown RBP8.73□□□□□ -1.01
NIPAL3-203ENST00000358028 IGLV5-52A0A0A0MRZ9 124 aa8.71□□□□□ -1.01
NIPAL3-203ENST00000358028 C4orf26Q17RF5 130 aa8.7□□□□□ -1.02
NIPAL3-203ENST00000358028 LINC00472Q9H8W2 130 aa8.69□□□□□ -1.02
NIPAL3-203ENST00000358028 A8MWP4 228 aa8.68□□□□□ -1.02
NIPAL3-203ENST00000358028 KRTAP29-1A8MX34 341 aaPredicted RBP8.68□□□□□ -1.02
NIPAL3-203ENST00000358028 PRR15Q8IV56 129 aa8.68□□□□□ -1.02
NIPAL3-203ENST00000358028 DNAH8Q96JB1 4490 aa8.68□□□□□ -1.02
NIPAL3-203ENST00000358028 KRTAP10-1P60331 282 aa8.68□□□□□ -1.02
NIPAL3-203ENST00000358028 RPL37AP61513 92 aaKnown RBP8.68□□□□□ -1.02
NIPAL3-203ENST00000358028 DEFB116Q30KQ4 102 aa8.68□□□□□ -1.02
NIPAL3-203ENST00000358028 PLAC8Q9NZF1 115 aa8.68□□□□□ -1.02
NIPAL3-203ENST00000358028 CDK2AP2O75956 126 aa8.66□□□□□ -1.02
NIPAL3-203ENST00000358028 NDUFB1O75438 58 aa8.66□□□□□ -1.02
NIPAL3-203ENST00000358028 LINC00483Q53H64 154 aa8.66□□□□□ -1.02
NIPAL3-203ENST00000358028 WFDC13Q8IUB5 93 aa8.66□□□□□ -1.02
NIPAL3-203ENST00000358028 ZNF706Q9Y5V0 76 aaPredicted RBP8.66□□□□□ -1.02
NIPAL3-203ENST00000358028 MP68P56378 58 aa8.65□□□□□ -1.02
NIPAL3-203ENST00000358028 HRCT1Q6UXD1 115 aa8.65□□□□□ -1.02
NIPAL3-203ENST00000358028 FP248Q71RG6 208 aaPredicted RBP8.65□□□□□ -1.02
NIPAL3-203ENST00000358028 KRTAP4-5Q9BYR2 181 aa8.65□□□□□ -1.02
NIPAL3-203ENST00000358028 PSORS1C2Q9UIG4 136 aa8.65□□□□□ -1.02
NIPAL3-203ENST00000358028 H3BPC8 53 aa8.64□□□□□ -1.03
NIPAL3-203ENST00000358028 CASC2Q6XLA1 102 aa8.64□□□□□ -1.03
NIPAL3-203ENST00000358028 IGLV9-49A0A0B4J1Y8 123 aa8.61□□□□□ -1.03
NIPAL3-203ENST00000358028 CYP4F30PQ9H0H9 118 aa8.6□□□□□ -1.03
NIPAL3-203ENST00000358028 ZNF861PO60384 105 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms