RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 TNP2Q05952 138 aa12.98□□□□□ -0.33
COL13A1-202ENST00000357811 Q8NBF4 154 aa12.98□□□□□ -0.33
COL13A1-202ENST00000357811 IGLV5-37A0A075B6J1 123 aa12.96□□□□□ -0.33
COL13A1-202ENST00000357811 OCR1Q9BZK8 76 aa12.96□□□□□ -0.33
COL13A1-202ENST00000357811 LRCOL1A6NCL2 159 aa12.95□□□□□ -0.34
COL13A1-202ENST00000357811 LINC00476Q8WZB0 136 aa12.95□□□□□ -0.34
COL13A1-202ENST00000357811 K7EQZ3 153 aa12.94□□□□□ -0.34
COL13A1-202ENST00000357811 ATP5EP56381 51 aaPredicted RBP12.94□□□□□ -0.34
COL13A1-202ENST00000357811 SEC61GP60059 68 aa12.93□□□□□ -0.34
COL13A1-202ENST00000357811 UBE2DNLQ8IWF7 75 aa12.93□□□□□ -0.34
COL13A1-202ENST00000357811 DNAH7Q8WXX0 4024 aa12.93□□□□□ -0.34
COL13A1-202ENST00000357811 DSCR10P59022 87 aa12.9□□□□□ -0.34
COL13A1-202ENST00000357811 KRTAP11-1Q8IUC1 163 aa12.9□□□□□ -0.34
COL13A1-202ENST00000357811 PHF5AQ7RTV0 110 aaKnown RBP12.9□□□□□ -0.35
COL13A1-202ENST00000357811 IGFL1Q6UW32 110 aa12.88□□□□□ -0.35
COL13A1-202ENST00000357811 A0A087WSZ3 146 aa12.87□□□□□ -0.35
COL13A1-202ENST00000357811 SPRR4Q96PI1 79 aa12.86□□□□□ -0.35
COL13A1-202ENST00000357811 C16orf90A8MZG2 172 aa12.85□□□□□ -0.35
COL13A1-202ENST00000357811 RPL37AP61513 92 aaKnown RBP12.84□□□□□ -0.35
COL13A1-202ENST00000357811 WFDC13Q8IUB5 93 aa12.83□□□□□ -0.36
COL13A1-202ENST00000357811 UBE2AP49459 152 aa12.81□□□□□ -0.36
COL13A1-202ENST00000357811 PRR4Q16378 134 aa12.78□□□□□ -0.36
COL13A1-202ENST00000357811 PANO1I0J062 215 aa12.75□□□□□ -0.37
COL13A1-202ENST00000357811 PLECQ15149 4684 aaKnown RBP12.75□□□□□ -0.37
COL13A1-202ENST00000357811 PSPHP1O15172 72 aa12.75□□□□□ -0.37
COL13A1-202ENST00000357811 CNBPP62633 177 aaKnown RBP12.75□□□□□ -0.37
COL13A1-202ENST00000357811 HCG22E2RYF7 251 aa12.73□□□□□ -0.37
COL13A1-202ENST00000357811 APLNQ9ULZ1 77 aa12.73□□□□□ -0.37
COL13A1-202ENST00000357811 A0A1B0GW54 56 aa12.72□□□□□ -0.37
COL13A1-202ENST00000357811 C1orf64Q8NEQ6 169 aa12.68□□□□□ -0.38
COL13A1-202ENST00000357811 hDV103S1A0JD37 113 aa12.67□□□□□ -0.38
COL13A1-202ENST00000357811 PMAIP1Q13794 54 aa12.67□□□□□ -0.38
COL13A1-202ENST00000357811 TGP01266 2768 aa12.65□□□□□ -0.39
COL13A1-202ENST00000357811 MDFIQ99750 246 aa12.63□□□□□ -0.39
COL13A1-202ENST00000357811 C9orf163Q8N9P6 203 aa12.63□□□□□ -0.39
COL13A1-202ENST00000357811 IGLV9-49A0A0B4J1Y8 123 aa12.61□□□□□ -0.39
COL13A1-202ENST00000357811 PRR15Q8IV56 129 aa12.61□□□□□ -0.39
COL13A1-202ENST00000357811 C14orf177Q52M58 125 aa12.6□□□□□ -0.39
COL13A1-202ENST00000357811 NBDYA0A0U1RRE5 68 aa12.6□□□□□ -0.39
COL13A1-202ENST00000357811 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.59□□□□□ -0.39
COL13A1-202ENST00000357811 IGLV8-61A0A075B6I0 122 aa12.58□□□□□ -0.4
COL13A1-202ENST00000357811 LINC00208Q96KT6 92 aa12.58□□□□□ -0.4
COL13A1-202ENST00000357811 H0Y9J4 135 aa12.57□□□□□ -0.4
COL13A1-202ENST00000357811 LCE6AA0A183 80 aa12.57□□□□□ -0.4
COL13A1-202ENST00000357811 B9D2Q9BPU9 175 aa12.57□□□□□ -0.4
COL13A1-202ENST00000357811 TRAV22A0A0B4J277 110 aa12.57□□□□□ -0.4
COL13A1-202ENST00000357811 STARD9Q9P2P6 4700 aa12.56□□□□□ -0.4
COL13A1-202ENST00000357811 Q1T7F1 81 aa12.56□□□□□ -0.4
COL13A1-202ENST00000357811 ZCCHC13Q8WW36 166 aaKnown RBP12.55□□□□□ -0.4
COL13A1-202ENST00000357811 CASC2Q6XLA1 102 aa12.55□□□□□ -0.4
COL13A1-202ENST00000357811 ANAPC11Q9NYG5 84 aa12.54□□□□□ -0.4
COL13A1-202ENST00000357811 A8MU10 97 aa12.53□□□□□ -0.4
COL13A1-202ENST00000357811 A8MUN3 132 aa12.53□□□□□ -0.4
COL13A1-202ENST00000357811 FRAS1Q86XX4 4008 aa12.52□□□□□ -0.41
COL13A1-202ENST00000357811 Q6ZRN7 208 aaPredicted RBP12.5□□□□□ -0.41
COL13A1-202ENST00000357811 MP68P56378 58 aa12.5□□□□□ -0.41
COL13A1-202ENST00000357811 LINC00472Q9H8W2 130 aa12.5□□□□□ -0.41
COL13A1-202ENST00000357811 KMT2AQ03164 3969 aa12.5□□□□□ -0.41
COL13A1-202ENST00000357811 PRKDCP78527 4128 aaKnown RBP12.49□□□□□ -0.41
COL13A1-202ENST00000357811 KRTAP29-1A8MX34 341 aaPredicted RBP12.48□□□□□ -0.41
COL13A1-202ENST00000357811 SPRR1BP22528 89 aa12.47□□□□□ -0.41
COL13A1-202ENST00000357811 A8MWP4 228 aa12.47□□□□□ -0.41
COL13A1-202ENST00000357811 H0Y9P7 68 aa12.47□□□□□ -0.41
COL13A1-202ENST00000357811 MEGF8Q7Z7M0 2845 aa12.43□□□□□ -0.42
COL13A1-202ENST00000357811 DYNC2H1Q8NCM8 4307 aaKnown RBP12.42□□□□□ -0.42
COL13A1-202ENST00000357811 KRTAP13-1Q8IUC0 172 aa12.42□□□□□ -0.42
COL13A1-202ENST00000357811 SPACA4Q8TDM5 124 aa12.41□□□□□ -0.42
COL13A1-202ENST00000357811 NUPR2A6NF83 97 aa12.41□□□□□ -0.42
COL13A1-202ENST00000357811 A0A087WTM6 91 aa12.39□□□□□ -0.43
COL13A1-202ENST00000357811 SPTSSBQ8NFR3 76 aa12.38□□□□□ -0.43
COL13A1-202ENST00000357811 CHKB-CPT1BH3BT56 60 aa12.38□□□□□ -0.43
COL13A1-202ENST00000357811 MOBPQ13875 183 aa12.38□□□□□ -0.43
COL13A1-202ENST00000357811 PSORS1C2Q9UIG4 136 aa12.37□□□□□ -0.43
COL13A1-202ENST00000357811 HECTD4Q9Y4D8 3996 aa12.37□□□□□ -0.43
COL13A1-202ENST00000357811 MMP24-AS1A0A0U1RRL7 71 aa12.36□□□□□ -0.43
COL13A1-202ENST00000357811 RTL8CO15255 209 aa12.35□□□□□ -0.43
COL13A1-202ENST00000357811 DNAH2Q9P225 4427 aa12.35□□□□□ -0.43
COL13A1-202ENST00000357811 NDUFB1O75438 58 aa12.35□□□□□ -0.43
COL13A1-202ENST00000357811 CYP4F30PQ9H0H9 118 aa12.34□□□□□ -0.43
COL13A1-202ENST00000357811 IGHV6-1A0A0B4J1U7 121 aa12.34□□□□□ -0.43
COL13A1-202ENST00000357811 Q5VV11 94 aa12.33□□□□□ -0.43
COL13A1-202ENST00000357811 FBN3Q75N90 2809 aa12.33□□□□□ -0.44
COL13A1-202ENST00000357811 NDUFS5O43920 106 aa12.33□□□□□ -0.44
COL13A1-202ENST00000357811 PCOTHQ58A44 107 aa12.33□□□□□ -0.44
COL13A1-202ENST00000357811 DNAH8Q96JB1 4490 aa12.33□□□□□ -0.44
COL13A1-202ENST00000357811 VPS13DQ5THJ4 4388 aa12.33□□□□□ -0.44
COL13A1-202ENST00000357811 Q96NJ1 140 aa12.31□□□□□ -0.44
COL13A1-202ENST00000357811 PRR15LQ9BU68 103 aa12.3□□□□□ -0.44
COL13A1-202ENST00000357811 CD164Q04900 197 aa12.3□□□□□ -0.44
COL13A1-202ENST00000357811 SPINK6Q6UWN8 80 aa12.28□□□□□ -0.44
COL13A1-202ENST00000357811 A0A087X002 238 aa12.27□□□□□ -0.45
COL13A1-202ENST00000357811 NOTCH2NLQ7Z3S9 236 aa12.27□□□□□ -0.45
COL13A1-202ENST00000357811 DNAH17Q9UFH2 4485 aa12.26□□□□□ -0.45
COL13A1-202ENST00000357811 WWC2-AS2Q96NR7 200 aa12.26□□□□□ -0.45
COL13A1-202ENST00000357811 IGLV5-52A0A0A0MRZ9 124 aa12.25□□□□□ -0.45
COL13A1-202ENST00000357811 Q8N9P0 234 aaPredicted RBP12.23□□□□□ -0.45
COL13A1-202ENST00000357811 C8orf17Q9NRJ1 99 aa12.22□□□□□ -0.45
COL13A1-202ENST00000357811 DNHD1Q96M86 4753 aa12.22□□□□□ -0.45
COL13A1-202ENST00000357811 DNAH6Q9C0G6 4158 aa12.21□□□□□ -0.45
COL13A1-202ENST00000357811 A6NED7 52 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms