RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 CRYGAP11844 174 aa14.97□□□□□ -0.01
SSBP3-202ENST00000357475 TRBV20-1A0A075B6N2 111 aa14.96□□□□□ -0.02
SSBP3-202ENST00000357475 IGLV9-49A0A0B4J1Y8 123 aa14.96□□□□□ -0.02
SSBP3-202ENST00000357475 SPCS1Q9Y6A9 102 aa14.96□□□□□ -0.02
SSBP3-202ENST00000357475 MT1HL1P0DM35 61 aa14.95□□□□□ -0.02
SSBP3-202ENST00000357475 ORMDL1Q9P0S3 153 aa14.94□□□□□ -0.02
SSBP3-202ENST00000357475 OXTP01178 125 aa14.93□□□□□ -0.02
SSBP3-202ENST00000357475 KRTAP29-1A8MX34 341 aaPredicted RBP14.92□□□□□ -0.02
SSBP3-202ENST00000357475 H3BMG7 143 aa14.92□□□□□ -0.02
SSBP3-202ENST00000357475 KRTAP10-8P60410 259 aa14.92□□□□□ -0.02
SSBP3-202ENST00000357475 OCIAD2Q56VL3 154 aa14.92□□□□□ -0.02
SSBP3-202ENST00000357475 MOBPQ13875 183 aa14.91□□□□□ -0.02
SSBP3-202ENST00000357475 LAMTOR3Q9UHA4 124 aa14.91□□□□□ -0.02
SSBP3-202ENST00000357475 MTURNQ8N3F0 131 aa14.89□□□□□ -0.03
SSBP3-202ENST00000357475 C9JAW5 83 aa14.88□□□□□ -0.03
SSBP3-202ENST00000357475 TYMSOSQ8TAI1 123 aa14.88□□□□□ -0.03
SSBP3-202ENST00000357475 PPDPFLQ8WWR9 84 aa14.88□□□□□ -0.03
SSBP3-202ENST00000357475 C9orf153Q5TBE3 101 aa14.87□□□□□ -0.03
SSBP3-202ENST00000357475 K7EP34 96 aa14.87□□□□□ -0.03
SSBP3-202ENST00000357475 BAALC-AS2P0C853 105 aa14.86□□□□□ -0.03
SSBP3-202ENST00000357475 A0A0G2JQZ4 141 aa14.83□□□□□ -0.04
SSBP3-202ENST00000357475 NDUFV3P56181 108 aaKnown RBP14.83□□□□□ -0.04
SSBP3-202ENST00000357475 TMEM256-PLSCR3K7ERE1 68 aa14.82□□□□□ -0.04
SSBP3-202ENST00000357475 A0A1B0GV72 72 aa14.82□□□□□ -0.04
SSBP3-202ENST00000357475 Q8NBF4 154 aa14.82□□□□□ -0.04
SSBP3-202ENST00000357475 GHRHP01286 108 aa14.8□□□□□ -0.04
SSBP3-202ENST00000357475 F8WEM9 126 aa14.78□□□□□ -0.04
SSBP3-202ENST00000357475 J3QL48 77 aa14.77□□□□□ -0.04
SSBP3-202ENST00000357475 UBE2V1Q13404 147 aa14.77□□□□□ -0.04
SSBP3-202ENST00000357475 A0A1B0GV90 55 aa14.76□□□□□ -0.05
SSBP3-202ENST00000357475 H3BQ85 93 aa14.76□□□□□ -0.05
SSBP3-202ENST00000357475 SSBP3-AS1Q7Z2R9 100 aa14.76□□□□□ -0.05
SSBP3-202ENST00000357475 IGLV8-61A0A075B6I0 122 aa14.75□□□□□ -0.05
SSBP3-202ENST00000357475 ANKRD29Q8N6D5 301 aa14.75□□□□□ -0.05
SSBP3-202ENST00000357475 SMCPP49901 116 aaPredicted RBP14.74□□□□□ -0.05
SSBP3-202ENST00000357475 GTF2H5Q6ZYL4 71 aa14.74□□□□□ -0.05
SSBP3-202ENST00000357475 PRO0461Q9UI25 63 aa14.74□□□□□ -0.05
SSBP3-202ENST00000357475 IGFL1Q6UW32 110 aa14.71□□□□□ -0.05
SSBP3-202ENST00000357475 LINC00304Q8N9R0 145 aa14.71□□□□□ -0.06
SSBP3-202ENST00000357475 DMBT1Q9UGM3 2413 aaPredicted RBP14.7□□□□□ -0.06
SSBP3-202ENST00000357475 H3BT86 120 aa14.7□□□□□ -0.06
SSBP3-202ENST00000357475 HRCT1Q6UXD1 115 aa14.68□□□□□ -0.06
SSBP3-202ENST00000357475 Q6JHZ5 121 aa14.64□□□□□ -0.07
SSBP3-202ENST00000357475 HERC1Q15751 4861 aa14.63□□□□□ -0.07
SSBP3-202ENST00000357475 RBM3P98179 157 aaKnown RBP14.61□□□□□ -0.07
SSBP3-202ENST00000357475 OBSCN-AS1Q96MR7 158 aa14.6□□□□□ -0.07
SSBP3-202ENST00000357475 C4orf48Q5BLP8 95 aa14.59□□□□□ -0.07
SSBP3-202ENST00000357475 TRBV7-4A0A0J9YYF1 115 aa14.58□□□□□ -0.08
SSBP3-202ENST00000357475 SPAG11AQ6PDA7 123 aa14.57□□□□□ -0.08
SSBP3-202ENST00000357475 A0A1W2PNM2 257 aa14.56□□□□□ -0.08
SSBP3-202ENST00000357475 C14orf132Q9NPU4 83 aa14.56□□□□□ -0.08
SSBP3-202ENST00000357475 JMJD7-PLA2G4BH0Y9G9 81 aa14.56□□□□□ -0.08
SSBP3-202ENST00000357475 F8W1H4 67 aa14.55□□□□□ -0.08
SSBP3-202ENST00000357475 SPINK1P00995 79 aa14.55□□□□□ -0.08
SSBP3-202ENST00000357475 CD164Q04900 197 aa14.54□□□□□ -0.08
SSBP3-202ENST00000357475 DSCR8Q96T75 97 aa14.54□□□□□ -0.08
SSBP3-202ENST00000357475 TRBV7-7A0A0K0K1E9 115 aa14.5□□□□□ -0.09
SSBP3-202ENST00000357475 CCKP06307 115 aa14.5□□□□□ -0.09
SSBP3-202ENST00000357475 Q6ZQT0 140 aa14.49□□□□□ -0.09
SSBP3-202ENST00000357475 TEN1Q86WV5 123 aa14.49□□□□□ -0.09
SSBP3-202ENST00000357475 LOC110117498A0A087WWA1 95 aa14.48□□□□□ -0.09
SSBP3-202ENST00000357475 VPS25Q9BRG1 176 aa14.48□□□□□ -0.09
SSBP3-202ENST00000357475 Q6Q795 121 aa14.47□□□□□ -0.09
SSBP3-202ENST00000357475 ETDBQ3ZM63 59 aa14.46□□□□□ -0.09
SSBP3-202ENST00000357475 RETNLBQ9BQ08 111 aa14.46□□□□□ -0.1
SSBP3-202ENST00000357475 RPS29P62273 56 aaKnown RBP14.45□□□□□ -0.1
SSBP3-202ENST00000357475 A0A087WSZ3 146 aa14.41□□□□□ -0.1
SSBP3-202ENST00000357475 LIMD2Q9BT23 127 aa14.39□□□□□ -0.11
SSBP3-202ENST00000357475 PDE6GP18545 87 aa14.37□□□□□ -0.11
SSBP3-202ENST00000357475 Q5XG85 94 aa14.37□□□□□ -0.11
SSBP3-202ENST00000357475 HMCN2Q8NDA2 5059 aa14.32□□□□□ -0.12
SSBP3-202ENST00000357475 C1orf195Q5TG92 126 aa14.31□□□□□ -0.12
SSBP3-202ENST00000357475 ASB16-AS1Q495Z4 193 aa14.28□□□□□ -0.12
SSBP3-202ENST00000357475 PRR4Q16378 134 aa14.26□□□□□ -0.13
SSBP3-202ENST00000357475 Q96NJ1 140 aa14.25□□□□□ -0.13
SSBP3-202ENST00000357475 SS18L2Q9UHA2 77 aa14.25□□□□□ -0.13
SSBP3-202ENST00000357475 LPAP08519 4548 aa14.21□□□□□ -0.13
SSBP3-202ENST00000357475 A0A1B0GW54 56 aa14.2□□□□□ -0.14
SSBP3-202ENST00000357475 C21orf62-AS1Q17RA5 79 aa14.2□□□□□ -0.14
SSBP3-202ENST00000357475 DEFB116Q30KQ4 102 aa14.2□□□□□ -0.14
SSBP3-202ENST00000357475 LINC00472Q9H8W2 130 aa14.18□□□□□ -0.14
SSBP3-202ENST00000357475 IGLV7-46A0A075B6I9 117 aa14.16□□□□□ -0.14
SSBP3-202ENST00000357475 FP248Q71RG6 208 aaPredicted RBP14.16□□□□□ -0.14
SSBP3-202ENST00000357475 LINC00846Q9NV44 126 aa14.14□□□□□ -0.15
SSBP3-202ENST00000357475 IGKV4-1P06312 121 aa14.09□□□□□ -0.15
SSBP3-202ENST00000357475 NREPQ16612 68 aa14.09□□□□□ -0.15
SSBP3-202ENST00000357475 Q6ZVQ6 151 aa14.07□□□□□ -0.16
SSBP3-202ENST00000357475 SIGMAR1Q99720 223 aa14.05□□□□□ -0.16
SSBP3-202ENST00000357475 LRP2P98164 4655 aa14.05□□□□□ -0.16
SSBP3-202ENST00000357475 KRTAP13-3Q3SY46 172 aa14.03□□□□□ -0.16
SSBP3-202ENST00000357475 C9orf92A6NGG3 77 aa14□□□□□ -0.17
SSBP3-202ENST00000357475 TPRXLQ17RH7 258 aa13.99□□□□□ -0.17
SSBP3-202ENST00000357475 FAM240AA0A1B0GVK7 77 aa13.98□□□□□ -0.17
SSBP3-202ENST00000357475 UBL5Q9BZL1 73 aa13.98□□□□□ -0.17
SSBP3-202ENST00000357475 J3KT08 172 aa13.95□□□□□ -0.18
SSBP3-202ENST00000357475 ACYP1P07311 99 aa13.95□□□□□ -0.18
SSBP3-202ENST00000357475 DSCR10P59022 87 aa13.94□□□□□ -0.18
SSBP3-202ENST00000357475 BPY2O14599 106 aa13.92□□□□□ -0.18
SSBP3-202ENST00000357475 NOTCH2NLQ7Z3S9 236 aa13.91□□□□□ -0.18
SSBP3-202ENST00000357475 IGKV3D-7A0A0C4DH55 119 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms