RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 IGKCP01834 107 aa4.49□□□□□ -1.69
COL4A3BP-202ENST00000357457 TAL2Q16559 108 aa4.49□□□□□ -1.69
COL4A3BP-202ENST00000357457 Q1RN00 199 aa4.49□□□□□ -1.69
COL4A3BP-202ENST00000357457 MTURNQ8N3F0 131 aa4.49□□□□□ -1.69
COL4A3BP-202ENST00000357457 LINC00308Q8TCZ7 52 aa4.49□□□□□ -1.69
COL4A3BP-202ENST00000357457 LITAFQ99732 161 aa4.49□□□□□ -1.69
COL4A3BP-202ENST00000357457 E9PLD3 99 aa4.48□□□□□ -1.69
COL4A3BP-202ENST00000357457 SNAPINO95295 136 aa4.48□□□□□ -1.69
COL4A3BP-202ENST00000357457 APOC3P02656 99 aa4.48□□□□□ -1.69
COL4A3BP-202ENST00000357457 COX7BP24311 80 aa4.48□□□□□ -1.69
COL4A3BP-202ENST00000357457 OR13C6PQ8NH95 151 aa4.48□□□□□ -1.69
COL4A3BP-202ENST00000357457 PMCHL2Q9BQD1 86 aa4.48□□□□□ -1.69
COL4A3BP-202ENST00000357457 SPANXDQ9BXN6 97 aa4.48□□□□□ -1.69
COL4A3BP-202ENST00000357457 TRBV7-6A0A0J9YX20 115 aa4.47□□□□□ -1.69
COL4A3BP-202ENST00000357457 TIMM17BO60830 172 aa4.47□□□□□ -1.69
COL4A3BP-202ENST00000357457 C6orf99Q4VX62 202 aa4.47□□□□□ -1.69
COL4A3BP-202ENST00000357457 SVBPQ8N300 66 aa4.47□□□□□ -1.69
COL4A3BP-202ENST00000357457 DEFB105AQ8NG35 78 aa4.47□□□□□ -1.69
COL4A3BP-202ENST00000357457 FAM218AQ96MZ4 157 aa4.47□□□□□ -1.69
COL4A3BP-202ENST00000357457 HSPB8Q9UJY1 196 aa4.47□□□□□ -1.69
COL4A3BP-202ENST00000357457 IGLV5-48A0A075B6I7 105 aa4.46□□□□□ -1.7
COL4A3BP-202ENST00000357457 SERF1AO75920 110 aa4.46□□□□□ -1.7
COL4A3BP-202ENST00000357457 A0A0G2JQZ4 141 aa4.45□□□□□ -1.7
COL4A3BP-202ENST00000357457 CFC1P0CG37 223 aa4.45□□□□□ -1.7
COL4A3BP-202ENST00000357457 TCL1BO95988 128 aa4.44□□□□□ -1.7
COL4A3BP-202ENST00000357457 TRGC2P03986 189 aa4.44□□□□□ -1.7
COL4A3BP-202ENST00000357457 FABP4P15090 132 aa4.44□□□□□ -1.7
COL4A3BP-202ENST00000357457 NDUFA5Q16718 116 aa4.44□□□□□ -1.7
COL4A3BP-202ENST00000357457 A0A1B0GWB2 263 aa4.43□□□□□ -1.7
COL4A3BP-202ENST00000357457 Q6Q795 121 aa4.42□□□□□ -1.7
COL4A3BP-202ENST00000357457 ATP11AUNQ6ZP68 121 aa4.41□□□□□ -1.7
COL4A3BP-202ENST00000357457 SYNE2Q8WXH0 6885 aaKnown RBP4.41□□□□□ -1.7
COL4A3BP-202ENST00000357457 MACF1Q9UPN3 7388 aaKnown RBP4.4□□□□□ -1.71
COL4A3BP-202ENST00000357457 ZNF815PA8K554 130 aa4.39□□□□□ -1.71
COL4A3BP-202ENST00000357457 SYS1-DBNDD2H3BUS1 97 aa4.39□□□□□ -1.71
COL4A3BP-202ENST00000357457 C20orf202A1L168 122 aa4.38□□□□□ -1.71
COL4A3BP-202ENST00000357457 PCP2Q8IVA1 136 aa4.38□□□□□ -1.71
COL4A3BP-202ENST00000357457 OBSCN-AS1Q96MR7 158 aa4.38□□□□□ -1.71
COL4A3BP-202ENST00000357457 TTTY13Q9BZ97 58 aa4.38□□□□□ -1.71
COL4A3BP-202ENST00000357457 IFITM1P13164 125 aa4.37□□□□□ -1.71
COL4A3BP-202ENST00000357457 LINC01545Q5VT33 79 aa4.37□□□□□ -1.71
COL4A3BP-202ENST00000357457 NHP2Q9NX24 153 aaKnown RBP4.37□□□□□ -1.71
COL4A3BP-202ENST00000357457 TRBV7-7A0A0K0K1E9 115 aa4.36□□□□□ -1.71
COL4A3BP-202ENST00000357457 A6NDN8 102 aa4.36□□□□□ -1.71
COL4A3BP-202ENST00000357457 Q6JHZ5 121 aa4.36□□□□□ -1.71
COL4A3BP-202ENST00000357457 COPS9Q8WXC6 57 aa4.36□□□□□ -1.71
COL4A3BP-202ENST00000357457 COLCA2A8K830 154 aa4.35□□□□□ -1.71
COL4A3BP-202ENST00000357457 Q6ZVH6 145 aa4.35□□□□□ -1.71
COL4A3BP-202ENST00000357457 SMIM11BQ8TCY0 68 aa4.35□□□□□ -1.71
COL4A3BP-202ENST00000357457 F8WEM9 126 aa4.34□□□□□ -1.71
COL4A3BP-202ENST00000357457 MT2AP02795 61 aa4.34□□□□□ -1.71
COL4A3BP-202ENST00000357457 IGFL1Q6UW32 110 aa4.34□□□□□ -1.71
COL4A3BP-202ENST00000357457 MUSTN1Q8IVN3 82 aa4.34□□□□□ -1.71
COL4A3BP-202ENST00000357457 CLEC2BQ92478 149 aa4.34□□□□□ -1.71
COL4A3BP-202ENST00000357457 C20orf166-AS1Q96NR2 134 aa4.34□□□□□ -1.71
COL4A3BP-202ENST00000357457 TRAV13-2A0A0B4J235 113 aa4.33□□□□□ -1.72
COL4A3BP-202ENST00000357457 A8MUU9 505 aa4.33□□□□□ -1.72
COL4A3BP-202ENST00000357457 OCIAD2Q56VL3 154 aa4.33□□□□□ -1.72
COL4A3BP-202ENST00000357457 LINC00575Q6W349 94 aa4.33□□□□□ -1.72
COL4A3BP-202ENST00000357457 SCGB1D4Q6XE38 83 aa4.33□□□□□ -1.72
COL4A3BP-202ENST00000357457 Q96NJ1 140 aa4.33□□□□□ -1.72
COL4A3BP-202ENST00000357457 TRBV20-1A0A075B6N2 111 aa4.32□□□□□ -1.72
COL4A3BP-202ENST00000357457 LST1O00453 97 aa4.31□□□□□ -1.72
COL4A3BP-202ENST00000357457 MT1FP04733 61 aa4.31□□□□□ -1.72
COL4A3BP-202ENST00000357457 Q6ZQY7 126 aa4.31□□□□□ -1.72
COL4A3BP-202ENST00000357457 hADV29S1A0JD25 119 aa4.3□□□□□ -1.72
COL4A3BP-202ENST00000357457 C3orf79P0CE67 100 aa4.3□□□□□ -1.72
COL4A3BP-202ENST00000357457 HIST1H2BKO60814 126 aa4.29□□□□□ -1.72
COL4A3BP-202ENST00000357457 HIST1H2BJP06899 126 aa4.29□□□□□ -1.72
COL4A3BP-202ENST00000357457 HIST1H2BOP23527 126 aa4.29□□□□□ -1.72
COL4A3BP-202ENST00000357457 HIST1H2BBP33778 126 aa4.29□□□□□ -1.72
COL4A3BP-202ENST00000357457 HIST1H2BDP58876 126 aa4.29□□□□□ -1.72
COL4A3BP-202ENST00000357457 HIST1H2BCP62807 126 aa4.29□□□□□ -1.72
COL4A3BP-202ENST00000357457 HIST2H2BEQ16778 126 aa4.29□□□□□ -1.72
COL4A3BP-202ENST00000357457 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.29□□□□□ -1.72
COL4A3BP-202ENST00000357457 HIST1H2BHQ93079 126 aa4.29□□□□□ -1.72
COL4A3BP-202ENST00000357457 HIST1H2BNQ99877 126 aa4.29□□□□□ -1.72
COL4A3BP-202ENST00000357457 HIST1H2BMQ99879 126 aa4.29□□□□□ -1.72
COL4A3BP-202ENST00000357457 KRTAP16-1A8MUX0 517 aa4.28□□□□□ -1.72
COL4A3BP-202ENST00000357457 PPDPFLQ8WWR9 84 aa4.28□□□□□ -1.72
COL4A3BP-202ENST00000357457 IGKV2-30P06310 120 aa4.27□□□□□ -1.73
COL4A3BP-202ENST00000357457 KRTAP10-10P60014 251 aa4.27□□□□□ -1.73
COL4A3BP-202ENST00000357457 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.27□□□□□ -1.73
COL4A3BP-202ENST00000357457 PRAC1Q96KF2 57 aa4.27□□□□□ -1.73
COL4A3BP-202ENST00000357457 SS18L2Q9UHA2 77 aa4.26□□□□□ -1.73
COL4A3BP-202ENST00000357457 KRTDAPP60985 99 aa4.25□□□□□ -1.73
COL4A3BP-202ENST00000357457 KRTAP19-6Q3LI70 58 aa4.25□□□□□ -1.73
COL4A3BP-202ENST00000357457 HIST1H4GQ99525 98 aa4.25□□□□□ -1.73
COL4A3BP-202ENST00000357457 SNHG12Q9BXW3 62 aa4.25□□□□□ -1.73
COL4A3BP-202ENST00000357457 H3BUT2 72 aa4.24□□□□□ -1.73
COL4A3BP-202ENST00000357457 COA6Q5JTJ3 125 aaKnown RBP4.24□□□□□ -1.73
COL4A3BP-202ENST00000357457 TEN1Q86WV5 123 aa4.24□□□□□ -1.73
COL4A3BP-202ENST00000357457 OCR1Q9BZK8 76 aa4.24□□□□□ -1.73
COL4A3BP-202ENST00000357457 FAM236DA0A1B0GTK5 79 aa4.23□□□□□ -1.73
COL4A3BP-202ENST00000357457 FAM236CP0DP71 79 aa4.23□□□□□ -1.73
COL4A3BP-202ENST00000357457 HRES1P13985 223 aa4.23□□□□□ -1.73
COL4A3BP-202ENST00000357457 NDUFV3P56181 108 aaKnown RBP4.23□□□□□ -1.73
COL4A3BP-202ENST00000357457 LINC00846Q9NV44 126 aa4.23□□□□□ -1.73
COL4A3BP-202ENST00000357457 ATOH7Q8N100 152 aa4.22□□□□□ -1.73
COL4A3BP-202ENST00000357457 RBM12B-AS1Q9P1G2 102 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms