RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 LINC00476Q8WZB0 136 aa11.15□□□□□ -0.62
GYPC-202ENST00000356887 A0A1W2PNN7 141 aa11.15□□□□□ -0.63
GYPC-202ENST00000356887 C4orf48Q5BLP8 95 aa11.14□□□□□ -0.63
GYPC-202ENST00000356887 DNAH9Q9NYC9 4486 aa11.13□□□□□ -0.63
GYPC-202ENST00000356887 IGKV2-24A0A0C4DH68 120 aa11.12□□□□□ -0.63
GYPC-202ENST00000356887 KTN1-AS1Q86SY8 53 aa11.12□□□□□ -0.63
GYPC-202ENST00000356887 FAM30AQ9NZY2 134 aa11.12□□□□□ -0.63
GYPC-202ENST00000356887 IGFL1Q6UW32 110 aa11.11□□□□□ -0.63
GYPC-202ENST00000356887 HIGD2AQ9BW72 106 aa11.11□□□□□ -0.63
GYPC-202ENST00000356887 hDV103S1A0JD37 113 aa11.1□□□□□ -0.63
GYPC-202ENST00000356887 PRLHP81277 87 aa11.1□□□□□ -0.63
GYPC-202ENST00000356887 A0A0G2JQZ4 141 aa11.1□□□□□ -0.63
GYPC-202ENST00000356887 LCE6AA0A183 80 aa11.1□□□□□ -0.63
GYPC-202ENST00000356887 K7EQZ3 153 aa11.1□□□□□ -0.63
GYPC-202ENST00000356887 B9D2Q9BPU9 175 aa11.1□□□□□ -0.63
GYPC-202ENST00000356887 IGLV8-61A0A075B6I0 122 aa11.09□□□□□ -0.63
GYPC-202ENST00000356887 PSCAO43653 123 aa11.08□□□□□ -0.64
GYPC-202ENST00000356887 RBM12B-AS1Q9P1G2 102 aa11.07□□□□□ -0.64
GYPC-202ENST00000356887 COL7A1Q02388 2944 aa11.06□□□□□ -0.64
GYPC-202ENST00000356887 PRKDCP78527 4128 aaKnown RBP11.05□□□□□ -0.64
GYPC-202ENST00000356887 NDUFS5O43920 106 aa11.05□□□□□ -0.64
GYPC-202ENST00000356887 APLNQ9ULZ1 77 aa11.05□□□□□ -0.64
GYPC-202ENST00000356887 KRTAP11-1Q8IUC1 163 aa11.04□□□□□ -0.64
GYPC-202ENST00000356887 UBE2DNLQ8IWF7 75 aa11.04□□□□□ -0.64
GYPC-202ENST00000356887 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.03□□□□□ -0.64
GYPC-202ENST00000356887 C14orf177Q52M58 125 aa11.03□□□□□ -0.64
GYPC-202ENST00000356887 HCG22E2RYF7 251 aa11.02□□□□□ -0.65
GYPC-202ENST00000356887 PHF5AQ7RTV0 110 aaKnown RBP11.02□□□□□ -0.65
GYPC-202ENST00000356887 DNAH10Q8IVF4 4471 aa11.01□□□□□ -0.65
GYPC-202ENST00000356887 CHTF8P0CG12 524 aa11.01□□□□□ -0.65
GYPC-202ENST00000356887 UBE2AP49459 152 aa11.01□□□□□ -0.65
GYPC-202ENST00000356887 STAB2Q8WWQ8 2551 aa11□□□□□ -0.65
GYPC-202ENST00000356887 A0A087WSZ3 146 aa11□□□□□ -0.65
GYPC-202ENST00000356887 H0Y9J4 135 aa11□□□□□ -0.65
GYPC-202ENST00000356887 MEGF8Q7Z7M0 2845 aa10.99□□□□□ -0.65
GYPC-202ENST00000356887 SPRR1BP22528 89 aa10.99□□□□□ -0.65
GYPC-202ENST00000356887 ZCCHC13Q8WW36 166 aaKnown RBP10.99□□□□□ -0.65
GYPC-202ENST00000356887 DEFB116Q30KQ4 102 aa10.99□□□□□ -0.65
GYPC-202ENST00000356887 TRAV22A0A0B4J277 110 aa10.96□□□□□ -0.65
GYPC-202ENST00000356887 C9orf163Q8N9P6 203 aa10.96□□□□□ -0.65
GYPC-202ENST00000356887 LYSTQ99698 3801 aa10.96□□□□□ -0.65
GYPC-202ENST00000356887 LRCOL1A6NCL2 159 aa10.94□□□□□ -0.66
GYPC-202ENST00000356887 DYNC2H1Q8NCM8 4307 aaKnown RBP10.93□□□□□ -0.66
GYPC-202ENST00000356887 CYP4F30PQ9H0H9 118 aa10.93□□□□□ -0.66
GYPC-202ENST00000356887 RPL37AP61513 92 aaKnown RBP10.91□□□□□ -0.66
GYPC-202ENST00000356887 ATP11AUNQ6ZP68 121 aa10.91□□□□□ -0.66
GYPC-202ENST00000356887 C1orf64Q8NEQ6 169 aa10.91□□□□□ -0.66
GYPC-202ENST00000356887 WFDC13Q8IUB5 93 aa10.91□□□□□ -0.66
GYPC-202ENST00000356887 KRTAP29-1A8MX34 341 aaPredicted RBP10.89□□□□□ -0.67
GYPC-202ENST00000356887 NBDYA0A0U1RRE5 68 aa10.88□□□□□ -0.67
GYPC-202ENST00000356887 LINC00472Q9H8W2 130 aa10.87□□□□□ -0.67
GYPC-202ENST00000356887 PANO1I0J062 215 aa10.86□□□□□ -0.67
GYPC-202ENST00000356887 PSPHP1O15172 72 aa10.86□□□□□ -0.67
GYPC-202ENST00000356887 Q6ZRN7 208 aaPredicted RBP10.86□□□□□ -0.67
GYPC-202ENST00000356887 KRTAP13-1Q8IUC0 172 aa10.86□□□□□ -0.67
GYPC-202ENST00000356887 A8MWP4 228 aa10.83□□□□□ -0.68
GYPC-202ENST00000356887 DNAH7Q8WXX0 4024 aa10.83□□□□□ -0.68
GYPC-202ENST00000356887 FBN3Q75N90 2809 aa10.83□□□□□ -0.68
GYPC-202ENST00000356887 SRRM2Q9UQ35 2752 aaKnown RBP10.82□□□□□ -0.68
GYPC-202ENST00000356887 CSMD3Q7Z407 3707 aa10.82□□□□□ -0.68
GYPC-202ENST00000356887 Q5VV11 94 aa10.82□□□□□ -0.68
GYPC-202ENST00000356887 CASC2Q6XLA1 102 aa10.82□□□□□ -0.68
GYPC-202ENST00000356887 LIMD2Q9BT23 127 aa10.82□□□□□ -0.68
GYPC-202ENST00000356887 MP68P56378 58 aa10.81□□□□□ -0.68
GYPC-202ENST00000356887 A6NN06 94 aa10.8□□□□□ -0.68
GYPC-202ENST00000356887 A8MUN3 132 aa10.79□□□□□ -0.68
GYPC-202ENST00000356887 NDUFB1O75438 58 aa10.79□□□□□ -0.68
GYPC-202ENST00000356887 NUPR2A6NF83 97 aa10.78□□□□□ -0.68
GYPC-202ENST00000356887 C7orf65Q6ZTY9 151 aa10.78□□□□□ -0.68
GYPC-202ENST00000356887 SPACA4Q8TDM5 124 aa10.77□□□□□ -0.69
GYPC-202ENST00000356887 LINC00208Q96KT6 92 aa10.77□□□□□ -0.69
GYPC-202ENST00000356887 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.77□□□□□ -0.69
GYPC-202ENST00000356887 TENM2Q9NT68 2774 aa10.76□□□□□ -0.69
GYPC-202ENST00000356887 STARD9Q9P2P6 4700 aa10.76□□□□□ -0.69
GYPC-202ENST00000356887 C8orf87E5RJ46 101 aa10.75□□□□□ -0.69
GYPC-202ENST00000356887 LCA10Q71F78 164 aa10.75□□□□□ -0.69
GYPC-202ENST00000356887 PLECQ15149 4684 aaKnown RBP10.75□□□□□ -0.69
GYPC-202ENST00000356887 H0Y9P7 68 aa10.74□□□□□ -0.69
GYPC-202ENST00000356887 H3BPC8 53 aa10.74□□□□□ -0.69
GYPC-202ENST00000356887 PRR4Q16378 134 aa10.73□□□□□ -0.69
GYPC-202ENST00000356887 MMP24-AS1A0A0U1RRL7 71 aa10.72□□□□□ -0.69
GYPC-202ENST00000356887 CHKB-CPT1BH3BT56 60 aa10.71□□□□□ -0.69
GYPC-202ENST00000356887 LINC00483Q53H64 154 aa10.71□□□□□ -0.69
GYPC-202ENST00000356887 Q75L30 129 aa10.7□□□□□ -0.7
GYPC-202ENST00000356887 TGP01266 2768 aa10.7□□□□□ -0.7
GYPC-202ENST00000356887 A0A087WTM6 91 aa10.7□□□□□ -0.7
GYPC-202ENST00000356887 IGLV9-49A0A0B4J1Y8 123 aa10.7□□□□□ -0.7
GYPC-202ENST00000356887 Q96NJ1 140 aa10.7□□□□□ -0.7
GYPC-202ENST00000356887 SPANXA2-OT1Q8N9U9 137 aa10.67□□□□□ -0.7
GYPC-202ENST00000356887 LOC101927531A0A1B0GV80 90 aa10.65□□□□□ -0.7
GYPC-202ENST00000356887 Q8N9P0 234 aaPredicted RBP10.65□□□□□ -0.7
GYPC-202ENST00000356887 CDC42SE1Q9NRR8 79 aa10.65□□□□□ -0.7
GYPC-202ENST00000356887 A8MU10 97 aa10.64□□□□□ -0.71
GYPC-202ENST00000356887 H3BS24 57 aa10.64□□□□□ -0.71
GYPC-202ENST00000356887 ASB16-AS1Q495Z4 193 aa10.64□□□□□ -0.71
GYPC-202ENST00000356887 SPTSSBQ8NFR3 76 aa10.64□□□□□ -0.71
GYPC-202ENST00000356887 VPS13DQ5THJ4 4388 aa10.64□□□□□ -0.71
GYPC-202ENST00000356887 ZNF706Q9Y5V0 76 aaPredicted RBP10.64□□□□□ -0.71
GYPC-202ENST00000356887 MOBPQ13875 183 aa10.62□□□□□ -0.71
GYPC-202ENST00000356887 PSORS1C2Q9UIG4 136 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms