RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 RETNLBQ9BQ08 111 aa8.23□□□□□ -1.09
BDNF-202ENST00000356660 RPL37AP61513 92 aaKnown RBP8.22□□□□□ -1.09
BDNF-202ENST00000356660 Q6ZRX8 168 aa8.22□□□□□ -1.09
BDNF-202ENST00000356660 A0A1W2PNM2 257 aa8.22□□□□□ -1.09
BDNF-202ENST00000356660 C15orf56Q8N910 161 aa8.21□□□□□ -1.09
BDNF-202ENST00000356660 CIRBP-AS1Q8TBR5 109 aa8.2□□□□□ -1.1
BDNF-202ENST00000356660 LINC00588Q9Y4M8 146 aa8.2□□□□□ -1.1
BDNF-202ENST00000356660 H0Y9P7 68 aa8.2□□□□□ -1.1
BDNF-202ENST00000356660 DMBT1Q9UGM3 2413 aaPredicted RBP8.2□□□□□ -1.1
BDNF-202ENST00000356660 CHTF8P0CG12 524 aa8.19□□□□□ -1.1
BDNF-202ENST00000356660 PCOTHQ58A44 107 aa8.19□□□□□ -1.1
BDNF-202ENST00000356660 LINC00476Q8WZB0 136 aa8.19□□□□□ -1.1
BDNF-202ENST00000356660 Q1T7F1 81 aa8.19□□□□□ -1.1
BDNF-202ENST00000356660 KRTAP1-1Q07627 177 aa8.18□□□□□ -1.1
BDNF-202ENST00000356660 KMT2BQ9UMN6 2715 aaPredicted RBP8.18□□□□□ -1.1
BDNF-202ENST00000356660 KCNQ1DNQ9H478 68 aa8.17□□□□□ -1.1
BDNF-202ENST00000356660 NUPR2A6NF83 97 aa8.17□□□□□ -1.1
BDNF-202ENST00000356660 SPAG11AQ6PDA7 123 aa8.17□□□□□ -1.1
BDNF-202ENST00000356660 IGHV6-1A0A0B4J1U7 121 aa8.17□□□□□ -1.1
BDNF-202ENST00000356660 KRTAP10-11P60412 298 aa8.16□□□□□ -1.1
BDNF-202ENST00000356660 FLG2Q5D862 2391 aaPredicted RBP8.15□□□□□ -1.1
BDNF-202ENST00000356660 IGLV5-52A0A0A0MRZ9 124 aa8.15□□□□□ -1.1
BDNF-202ENST00000356660 PHF5AQ7RTV0 110 aaKnown RBP8.15□□□□□ -1.11
BDNF-202ENST00000356660 LINC01554Q52M75 96 aa8.14□□□□□ -1.11
BDNF-202ENST00000356660 PRAC1Q96KF2 57 aa8.14□□□□□ -1.11
BDNF-202ENST00000356660 CYP4F30PQ9H0H9 118 aa8.14□□□□□ -1.11
BDNF-202ENST00000356660 NBPF19A0A087WUL8 3843 aa8.12□□□□□ -1.11
BDNF-202ENST00000356660 C16orf90A8MZG2 172 aa8.12□□□□□ -1.11
BDNF-202ENST00000356660 TENM4Q6N022 2769 aa8.11□□□□□ -1.11
BDNF-202ENST00000356660 IGLV5-48A0A075B6I7 105 aa8.11□□□□□ -1.11
BDNF-202ENST00000356660 H3BNG1 76 aa8.11□□□□□ -1.11
BDNF-202ENST00000356660 DSCR10P59022 87 aa8.11□□□□□ -1.11
BDNF-202ENST00000356660 IGLV1-50A0A075B6I6 118 aa8.1□□□□□ -1.11
BDNF-202ENST00000356660 VWFP04275 2813 aa8.09□□□□□ -1.11
BDNF-202ENST00000356660 CASC10Q5T4H9 136 aa8.09□□□□□ -1.11
BDNF-202ENST00000356660 C1orf134Q5TEV5 83 aa8.09□□□□□ -1.11
BDNF-202ENST00000356660 A0A1B0GW54 56 aa8.08□□□□□ -1.12
BDNF-202ENST00000356660 IGFL1Q6UW32 110 aa8.08□□□□□ -1.12
BDNF-202ENST00000356660 LOC101927531A0A1B0GV80 90 aa8.08□□□□□ -1.12
BDNF-202ENST00000356660 A8MU10 97 aa8.07□□□□□ -1.12
BDNF-202ENST00000356660 K7EIL1 84 aa8.06□□□□□ -1.12
BDNF-202ENST00000356660 DNAH10OSP0CZ25 163 aa8.06□□□□□ -1.12
BDNF-202ENST00000356660 PRR26Q8N8Z3 221 aa8.06□□□□□ -1.12
BDNF-202ENST00000356660 PDZD2O15018 2839 aa8.05□□□□□ -1.12
BDNF-202ENST00000356660 MOBPQ13875 183 aa8.05□□□□□ -1.12
BDNF-202ENST00000356660 Q5VV11 94 aa8.03□□□□□ -1.12
BDNF-202ENST00000356660 CDC42SE1Q9NRR8 79 aa8.03□□□□□ -1.12
BDNF-202ENST00000356660 NBDYA0A0U1RRE5 68 aa8.01□□□□□ -1.13
BDNF-202ENST00000356660 LINC00313P59037 77 aa8□□□□□ -1.13
BDNF-202ENST00000356660 SPRR4Q96PI1 79 aa7.99□□□□□ -1.13
BDNF-202ENST00000356660 ZNF469Q96JG9 3925 aaPredicted RBP7.98□□□□□ -1.13
BDNF-202ENST00000356660 COA5Q86WW8 74 aa7.98□□□□□ -1.13
BDNF-202ENST00000356660 KRTAP26-1Q6PEX3 210 aa7.98□□□□□ -1.13
BDNF-202ENST00000356660 PKD1L1Q8TDX9 2849 aa7.97□□□□□ -1.13
BDNF-202ENST00000356660 SPINK1P00995 79 aa7.97□□□□□ -1.13
BDNF-202ENST00000356660 Q8N9P0 234 aaPredicted RBP7.97□□□□□ -1.13
BDNF-202ENST00000356660 TENM1Q9UKZ4 2725 aa7.96□□□□□ -1.13
BDNF-202ENST00000356660 SPACA4Q8TDM5 124 aa7.96□□□□□ -1.14
BDNF-202ENST00000356660 A8MWP4 228 aa7.94□□□□□ -1.14
BDNF-202ENST00000356660 ANAPC11Q9NYG5 84 aa7.94□□□□□ -1.14
BDNF-202ENST00000356660 RTL8CO15255 209 aa7.94□□□□□ -1.14
BDNF-202ENST00000356660 TLX1NBP0CAT3 122 aa7.93□□□□□ -1.14
BDNF-202ENST00000356660 IGKV2D-30A0A075B6S6 120 aa7.92□□□□□ -1.14
BDNF-202ENST00000356660 IGKV2-30P06310 120 aa7.92□□□□□ -1.14
BDNF-202ENST00000356660 TENM3Q9P273 2699 aa7.91□□□□□ -1.14
BDNF-202ENST00000356660 H3BPC8 53 aa7.91□□□□□ -1.14
BDNF-202ENST00000356660 PLA2G2DQ9UNK4 145 aa7.91□□□□□ -1.14
BDNF-202ENST00000356660 TNP2Q05952 138 aa7.91□□□□□ -1.14
BDNF-202ENST00000356660 FBN1P35555 2871 aaKnown RBP7.9□□□□□ -1.14
BDNF-202ENST00000356660 SPRR1AP35321 89 aa7.89□□□□□ -1.15
BDNF-202ENST00000356660 ZCCHC13Q8WW36 166 aaKnown RBP7.89□□□□□ -1.15
BDNF-202ENST00000356660 AKAP9Q99996 3911 aa7.89□□□□□ -1.15
BDNF-202ENST00000356660 Q75L30 129 aa7.87□□□□□ -1.15
BDNF-202ENST00000356660 OTOGQ6ZRI0 2925 aa7.87□□□□□ -1.15
BDNF-202ENST00000356660 CNBPP62633 177 aaKnown RBP7.87□□□□□ -1.15
BDNF-202ENST00000356660 KRTAP4-16G5E9R7 235 aaPredicted RBP7.86□□□□□ -1.15
BDNF-202ENST00000356660 A0A1B0GU69 56 aa7.86□□□□□ -1.15
BDNF-202ENST00000356660 IGLV5-37A0A075B6J1 123 aa7.85□□□□□ -1.15
BDNF-202ENST00000356660 SPANXA2-OT1Q8N9U9 137 aa7.85□□□□□ -1.15
BDNF-202ENST00000356660 A6NN06 94 aa7.83□□□□□ -1.16
BDNF-202ENST00000356660 C9orf163Q8N9P6 203 aa7.83□□□□□ -1.16
BDNF-202ENST00000356660 TP53AIP1Q9HCN2 124 aa7.83□□□□□ -1.16
BDNF-202ENST00000356660 CSAG1Q6PB30 78 aa7.81□□□□□ -1.16
BDNF-202ENST00000356660 IGLV8-61A0A075B6I0 122 aa7.8□□□□□ -1.16
BDNF-202ENST00000356660 LCE6AA0A183 80 aa7.8□□□□□ -1.16
BDNF-202ENST00000356660 KRTAP7-1Q8IUC3 87 aa7.8□□□□□ -1.16
BDNF-202ENST00000356660 SPINT4Q6UDR6 99 aa7.8□□□□□ -1.16
BDNF-202ENST00000356660 C8orf17Q9NRJ1 99 aa7.8□□□□□ -1.16
BDNF-202ENST00000356660 SPINK7P58062 85 aa7.79□□□□□ -1.16
BDNF-202ENST00000356660 TRRAPQ9Y4A5 3859 aa7.79□□□□□ -1.16
BDNF-202ENST00000356660 A0A087WTM6 91 aa7.79□□□□□ -1.16
BDNF-202ENST00000356660 K7ERS5 55 aa7.79□□□□□ -1.16
BDNF-202ENST00000356660 A0A0A0MQY5 61 aa7.78□□□□□ -1.16
BDNF-202ENST00000356660 ADM2Q7Z4H4 148 aa7.77□□□□□ -1.17
BDNF-202ENST00000356660 APLNQ9ULZ1 77 aa7.76□□□□□ -1.17
BDNF-202ENST00000356660 IGLV7-46A0A075B6I9 117 aa7.76□□□□□ -1.17
BDNF-202ENST00000356660 MRPL34Q9BQ48 92 aaKnown RBP7.76□□□□□ -1.17
BDNF-202ENST00000356660 MMP24-AS1A0A0U1RRL7 71 aa7.75□□□□□ -1.17
BDNF-202ENST00000356660 KRTAP29-1A8MX34 341 aaPredicted RBP7.75□□□□□ -1.17
BDNF-202ENST00000356660 TYMSOSQ8TAI1 123 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms