RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 LAMTOR3Q9UHA4 124 aa9.16□□□□□ -0.94
TRIM13-201ENST00000356017 GHRHP01286 108 aa9.15□□□□□ -0.94
TRIM13-201ENST00000356017 LINC01547P58512 204 aaPredicted RBP9.15□□□□□ -0.94
TRIM13-201ENST00000356017 OCIAD2Q56VL3 154 aa9.15□□□□□ -0.94
TRIM13-201ENST00000356017 H3BMG7 143 aa9.14□□□□□ -0.95
TRIM13-201ENST00000356017 C3orf22Q8N5N4 141 aa9.14□□□□□ -0.95
TRIM13-201ENST00000356017 PPDPFLQ8WWR9 84 aa9.14□□□□□ -0.95
TRIM13-201ENST00000356017 CLEC2BQ92478 149 aa9.14□□□□□ -0.95
TRIM13-201ENST00000356017 IGLV9-49A0A0B4J1Y8 123 aa9.13□□□□□ -0.95
TRIM13-201ENST00000356017 Q8N377 158 aa9.13□□□□□ -0.95
TRIM13-201ENST00000356017 DNAL4O96015 105 aa9.13□□□□□ -0.95
TRIM13-201ENST00000356017 TNXBP22105 4242 aa9.12□□□□□ -0.95
TRIM13-201ENST00000356017 TCL1BO95988 128 aa9.12□□□□□ -0.95
TRIM13-201ENST00000356017 SSBP3-AS1Q7Z2R9 100 aa9.12□□□□□ -0.95
TRIM13-201ENST00000356017 MOBPQ13875 183 aa9.11□□□□□ -0.95
TRIM13-201ENST00000356017 MTURNQ8N3F0 131 aa9.11□□□□□ -0.95
TRIM13-201ENST00000356017 PRO0461Q9UI25 63 aa9.11□□□□□ -0.95
TRIM13-201ENST00000356017 C9orf153Q5TBE3 101 aa9.1□□□□□ -0.95
TRIM13-201ENST00000356017 LYRM7Q5U5X0 104 aa9.1□□□□□ -0.95
TRIM13-201ENST00000356017 DMBT1Q9UGM3 2413 aaPredicted RBP9.1□□□□□ -0.95
TRIM13-201ENST00000356017 SMIM29Q86T20 159 aa9.09□□□□□ -0.95
TRIM13-201ENST00000356017 Q8NBF4 154 aa9.09□□□□□ -0.95
TRIM13-201ENST00000356017 LST1O00453 97 aa9.09□□□□□ -0.95
TRIM13-201ENST00000356017 TRACP01848 142 aa9.09□□□□□ -0.95
TRIM13-201ENST00000356017 LINC00304Q8N9R0 145 aa9.09□□□□□ -0.95
TRIM13-201ENST00000356017 H3BQ85 93 aa9.08□□□□□ -0.96
TRIM13-201ENST00000356017 F8WEM9 126 aa9.07□□□□□ -0.96
TRIM13-201ENST00000356017 C4orf48Q5BLP8 95 aa9.07□□□□□ -0.96
TRIM13-201ENST00000356017 SPAG11AQ6PDA7 123 aa9.07□□□□□ -0.96
TRIM13-201ENST00000356017 TRBV20-1A0A075B6N2 111 aa9.06□□□□□ -0.96
TRIM13-201ENST00000356017 SMCPP49901 116 aaPredicted RBP9.06□□□□□ -0.96
TRIM13-201ENST00000356017 ORMDL1Q9P0S3 153 aa9.06□□□□□ -0.96
TRIM13-201ENST00000356017 ATXN8Q156A1 80 aa9.05□□□□□ -0.96
TRIM13-201ENST00000356017 F8W1H4 67 aa9.05□□□□□ -0.96
TRIM13-201ENST00000356017 TMEM256-PLSCR3K7ERE1 68 aa9.03□□□□□ -0.96
TRIM13-201ENST00000356017 SPINK1P00995 79 aa9.02□□□□□ -0.97
TRIM13-201ENST00000356017 NDUFV3P56181 108 aaKnown RBP9.02□□□□□ -0.97
TRIM13-201ENST00000356017 IGLV8-61A0A075B6I0 122 aa9□□□□□ -0.97
TRIM13-201ENST00000356017 C9JAW5 83 aa9□□□□□ -0.97
TRIM13-201ENST00000356017 Q6JHZ5 121 aa9□□□□□ -0.97
TRIM13-201ENST00000356017 ETDBQ3ZM63 59 aa8.99□□□□□ -0.97
TRIM13-201ENST00000356017 RPS29P62273 56 aaKnown RBP8.98□□□□□ -0.97
TRIM13-201ENST00000356017 CD164Q04900 197 aa8.97□□□□□ -0.97
TRIM13-201ENST00000356017 BAALC-AS2P0C853 105 aa8.96□□□□□ -0.98
TRIM13-201ENST00000356017 HERC1Q15751 4861 aa8.94□□□□□ -0.98
TRIM13-201ENST00000356017 ANKRD29Q8N6D5 301 aa8.94□□□□□ -0.98
TRIM13-201ENST00000356017 IGFL1Q6UW32 110 aa8.93□□□□□ -0.98
TRIM13-201ENST00000356017 K7ERU9 68 aa8.92□□□□□ -0.98
TRIM13-201ENST00000356017 HRCT1Q6UXD1 115 aa8.92□□□□□ -0.98
TRIM13-201ENST00000356017 TEN1Q86WV5 123 aa8.91□□□□□ -0.98
TRIM13-201ENST00000356017 A0A0G2JQZ4 141 aa8.91□□□□□ -0.98
TRIM13-201ENST00000356017 LIMD2Q9BT23 127 aa8.91□□□□□ -0.98
TRIM13-201ENST00000356017 H3BT86 120 aa8.88□□□□□ -0.99
TRIM13-201ENST00000356017 RBM3P98179 157 aaKnown RBP8.87□□□□□ -0.99
TRIM13-201ENST00000356017 JMJD7-PLA2G4BH0Y9G9 81 aa8.87□□□□□ -0.99
TRIM13-201ENST00000356017 Q5XG85 94 aa8.87□□□□□ -0.99
TRIM13-201ENST00000356017 Q6Q795 121 aa8.87□□□□□ -0.99
TRIM13-201ENST00000356017 TRBV7-7A0A0K0K1E9 115 aa8.85□□□□□ -0.99
TRIM13-201ENST00000356017 A0A1B0GV72 72 aa8.85□□□□□ -0.99
TRIM13-201ENST00000356017 DSCR8Q96T75 97 aa8.85□□□□□ -0.99
TRIM13-201ENST00000356017 PRR4Q16378 134 aa8.84□□□□□ -0.99
TRIM13-201ENST00000356017 RETNLBQ9BQ08 111 aa8.84□□□□□ -0.99
TRIM13-201ENST00000356017 TRBV7-4A0A0J9YYF1 115 aa8.82□□□□□ -1
TRIM13-201ENST00000356017 FP248Q71RG6 208 aaPredicted RBP8.82□□□□□ -1
TRIM13-201ENST00000356017 VPS25Q9BRG1 176 aa8.82□□□□□ -1
TRIM13-201ENST00000356017 J3QR89 54 aa8.8□□□□□ -1
TRIM13-201ENST00000356017 CCKP06307 115 aa8.8□□□□□ -1
TRIM13-201ENST00000356017 PDE6GP18545 87 aa8.8□□□□□ -1
TRIM13-201ENST00000356017 SS18L2Q9UHA2 77 aa8.8□□□□□ -1
TRIM13-201ENST00000356017 A0A1W2PNM2 257 aa8.79□□□□□ -1
TRIM13-201ENST00000356017 OBSCN-AS1Q96MR7 158 aa8.79□□□□□ -1
TRIM13-201ENST00000356017 IGLV7-46A0A075B6I9 117 aa8.77□□□□□ -1.01
TRIM13-201ENST00000356017 ASB16-AS1Q495Z4 193 aa8.77□□□□□ -1.01
TRIM13-201ENST00000356017 A0A087WSZ3 146 aa8.76□□□□□ -1.01
TRIM13-201ENST00000356017 LOC110117498A0A087WWA1 95 aa8.76□□□□□ -1.01
TRIM13-201ENST00000356017 C21orf62-AS1Q17RA5 79 aa8.76□□□□□ -1.01
TRIM13-201ENST00000356017 HMCN2Q8NDA2 5059 aa8.75□□□□□ -1.01
TRIM13-201ENST00000356017 C14orf132Q9NPU4 83 aa8.75□□□□□ -1.01
TRIM13-201ENST00000356017 C1orf195Q5TG92 126 aa8.74□□□□□ -1.01
TRIM13-201ENST00000356017 CDIP1Q9H305 208 aa8.74□□□□□ -1.01
TRIM13-201ENST00000356017 Q6ZQT0 140 aa8.73□□□□□ -1.01
TRIM13-201ENST00000356017 A0A1B0GW54 56 aa8.72□□□□□ -1.01
TRIM13-201ENST00000356017 TPRXLQ17RH7 258 aa8.71□□□□□ -1.02
TRIM13-201ENST00000356017 KRTAP13-3Q3SY46 172 aa8.64□□□□□ -1.03
TRIM13-201ENST00000356017 FAM240AA0A1B0GVK7 77 aa8.63□□□□□ -1.03
TRIM13-201ENST00000356017 Q96NJ1 140 aa8.62□□□□□ -1.03
TRIM13-201ENST00000356017 SIGMAR1Q99720 223 aa8.62□□□□□ -1.03
TRIM13-201ENST00000356017 MT-ATP8P03928 68 aa8.62□□□□□ -1.03
TRIM13-201ENST00000356017 LINC00472Q9H8W2 130 aa8.61□□□□□ -1.03
TRIM13-201ENST00000356017 IGKV4-1P06312 121 aa8.58□□□□□ -1.04
TRIM13-201ENST00000356017 LPAP08519 4548 aa8.58□□□□□ -1.04
TRIM13-201ENST00000356017 ACYP1P07311 99 aa8.57□□□□□ -1.04
TRIM13-201ENST00000356017 NREPQ16612 68 aa8.57□□□□□ -1.04
TRIM13-201ENST00000356017 J3KT08 172 aa8.56□□□□□ -1.04
TRIM13-201ENST00000356017 LRP2P98164 4655 aa8.56□□□□□ -1.04
TRIM13-201ENST00000356017 C9orf92A6NGG3 77 aa8.55□□□□□ -1.04
TRIM13-201ENST00000356017 DEFB116Q30KQ4 102 aa8.55□□□□□ -1.04
TRIM13-201ENST00000356017 XP32Q5T750 250 aa8.51□□□□□ -1.05
TRIM13-201ENST00000356017 LINC00846Q9NV44 126 aa8.51□□□□□ -1.05
TRIM13-201ENST00000356017 PCP4P48539 62 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms