RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 H3BS24 57 aa9.28□□□□□ -0.92
SREBF1-202ENST00000355815 LY6G6CO95867 125 aa9.28□□□□□ -0.92
SREBF1-202ENST00000355815 Q6ZRX8 168 aa9.28□□□□□ -0.92
SREBF1-202ENST00000355815 Q8NDZ9 215 aa9.28□□□□□ -0.92
SREBF1-202ENST00000355815 LINC01556Q5JQF7 62 aa9.27□□□□□ -0.93
SREBF1-202ENST00000355815 ATP11AUNQ6ZP68 121 aa9.27□□□□□ -0.93
SREBF1-202ENST00000355815 IGKV2D-30A0A075B6S6 120 aa9.26□□□□□ -0.93
SREBF1-202ENST00000355815 IGKV2-30P06310 120 aa9.26□□□□□ -0.93
SREBF1-202ENST00000355815 A0A1B0GU69 56 aa9.26□□□□□ -0.93
SREBF1-202ENST00000355815 OBSCN-AS1Q96MR7 158 aa9.26□□□□□ -0.93
SREBF1-202ENST00000355815 FAM229BQ4G0N7 80 aa9.25□□□□□ -0.93
SREBF1-202ENST00000355815 COA5Q86WW8 74 aa9.25□□□□□ -0.93
SREBF1-202ENST00000355815 LINC00588Q9Y4M8 146 aa9.25□□□□□ -0.93
SREBF1-202ENST00000355815 CASC10Q5T4H9 136 aa9.25□□□□□ -0.93
SREBF1-202ENST00000355815 LINC00528Q8N1L1 170 aa9.25□□□□□ -0.93
SREBF1-202ENST00000355815 NUPR2A6NF83 97 aa9.24□□□□□ -0.93
SREBF1-202ENST00000355815 PRR34Q9NV39 138 aa9.24□□□□□ -0.93
SREBF1-202ENST00000355815 ERC2-IT1O76042 136 aa9.23□□□□□ -0.93
SREBF1-202ENST00000355815 RBM12B-AS1Q9P1G2 102 aa9.23□□□□□ -0.93
SREBF1-202ENST00000355815 Q8N377 158 aa9.22□□□□□ -0.93
SREBF1-202ENST00000355815 LINC01600Q96MT4 127 aa9.22□□□□□ -0.93
SREBF1-202ENST00000355815 TENM3Q9P273 2699 aa9.22□□□□□ -0.93
SREBF1-202ENST00000355815 C15orf56Q8N910 161 aa9.21□□□□□ -0.94
SREBF1-202ENST00000355815 CHTF8P0CG12 524 aa9.2□□□□□ -0.94
SREBF1-202ENST00000355815 PHF5AQ7RTV0 110 aaKnown RBP9.19□□□□□ -0.94
SREBF1-202ENST00000355815 MOBPQ13875 183 aa9.18□□□□□ -0.94
SREBF1-202ENST00000355815 KTN1-AS1Q86SY8 53 aa9.18□□□□□ -0.94
SREBF1-202ENST00000355815 ZNF706Q9Y5V0 76 aaPredicted RBP9.17□□□□□ -0.94
SREBF1-202ENST00000355815 LOC101927531A0A1B0GV80 90 aa9.17□□□□□ -0.94
SREBF1-202ENST00000355815 PKD1L1Q8TDX9 2849 aa9.17□□□□□ -0.94
SREBF1-202ENST00000355815 A0A1W2PNM2 257 aa9.17□□□□□ -0.94
SREBF1-202ENST00000355815 FLG2Q5D862 2391 aaPredicted RBP9.16□□□□□ -0.94
SREBF1-202ENST00000355815 PRR15Q8IV56 129 aa9.15□□□□□ -0.94
SREBF1-202ENST00000355815 C8orf87E5RJ46 101 aa9.14□□□□□ -0.95
SREBF1-202ENST00000355815 OCR1Q9BZK8 76 aa9.14□□□□□ -0.95
SREBF1-202ENST00000355815 EPM2AB3EWF7 344 aa9.14□□□□□ -0.95
SREBF1-202ENST00000355815 IGFL1Q6UW32 110 aa9.13□□□□□ -0.95
SREBF1-202ENST00000355815 GVQW2A0A096LPI5 108 aaPredicted RBP9.12□□□□□ -0.95
SREBF1-202ENST00000355815 K7EIL1 84 aa9.12□□□□□ -0.95
SREBF1-202ENST00000355815 H3BNG1 76 aa9.12□□□□□ -0.95
SREBF1-202ENST00000355815 ACYP2P14621 99 aa9.12□□□□□ -0.95
SREBF1-202ENST00000355815 CYP4F30PQ9H0H9 118 aa9.1□□□□□ -0.95
SREBF1-202ENST00000355815 TP53AIP1Q9HCN2 124 aa9.09□□□□□ -0.95
SREBF1-202ENST00000355815 A0A1B0GW54 56 aa9.09□□□□□ -0.95
SREBF1-202ENST00000355815 KCNQ1DNQ9H478 68 aa9.09□□□□□ -0.95
SREBF1-202ENST00000355815 DNAH10OSP0CZ25 163 aa9.08□□□□□ -0.96
SREBF1-202ENST00000355815 H3BPC8 53 aa9.08□□□□□ -0.96
SREBF1-202ENST00000355815 C7orf65Q6ZTY9 151 aa9.08□□□□□ -0.96
SREBF1-202ENST00000355815 A8MWP4 228 aa9.07□□□□□ -0.96
SREBF1-202ENST00000355815 PRR26Q8N8Z3 221 aa9.06□□□□□ -0.96
SREBF1-202ENST00000355815 IGLV1-50A0A075B6I6 118 aa9.05□□□□□ -0.96
SREBF1-202ENST00000355815 SPACA4Q8TDM5 124 aa9.05□□□□□ -0.96
SREBF1-202ENST00000355815 IGLV5-52A0A0A0MRZ9 124 aa9.03□□□□□ -0.96
SREBF1-202ENST00000355815 LCA10Q71F78 164 aa9.01□□□□□ -0.97
SREBF1-202ENST00000355815 PRAC1Q96KF2 57 aa9□□□□□ -0.97
SREBF1-202ENST00000355815 ANAPC11Q9NYG5 84 aa9□□□□□ -0.97
SREBF1-202ENST00000355815 DSCR10P59022 87 aa9□□□□□ -0.97
SREBF1-202ENST00000355815 Q1T7F1 81 aa8.99□□□□□ -0.97
SREBF1-202ENST00000355815 C1orf134Q5TEV5 83 aa8.99□□□□□ -0.97
SREBF1-202ENST00000355815 TENM2Q9NT68 2774 aa8.99□□□□□ -0.97
SREBF1-202ENST00000355815 TRRAPQ9Y4A5 3859 aa8.98□□□□□ -0.97
SREBF1-202ENST00000355815 MRPL34Q9BQ48 92 aaKnown RBP8.97□□□□□ -0.97
SREBF1-202ENST00000355815 SSBP3-AS1Q7Z2R9 100 aa8.97□□□□□ -0.97
SREBF1-202ENST00000355815 ZNF469Q96JG9 3925 aaPredicted RBP8.97□□□□□ -0.97
SREBF1-202ENST00000355815 UQCR11O14957 56 aa8.96□□□□□ -0.97
SREBF1-202ENST00000355815 MIR22HGQ0VDD5 57 aa8.95□□□□□ -0.98
SREBF1-202ENST00000355815 C8orf17Q9NRJ1 99 aa8.95□□□□□ -0.98
SREBF1-202ENST00000355815 C16orf90A8MZG2 172 aa8.94□□□□□ -0.98
SREBF1-202ENST00000355815 IGLV5-48A0A075B6I7 105 aa8.93□□□□□ -0.98
SREBF1-202ENST00000355815 CDC42SE1Q9NRR8 79 aa8.93□□□□□ -0.98
SREBF1-202ENST00000355815 SPINT4Q6UDR6 99 aa8.93□□□□□ -0.98
SREBF1-202ENST00000355815 Q8N9P0 234 aaPredicted RBP8.92□□□□□ -0.98
SREBF1-202ENST00000355815 NBDYA0A0U1RRE5 68 aa8.91□□□□□ -0.98
SREBF1-202ENST00000355815 LINC00313P59037 77 aa8.91□□□□□ -0.98
SREBF1-202ENST00000355815 KRTAP26-1Q6PEX3 210 aa8.9□□□□□ -0.99
SREBF1-202ENST00000355815 Q5VV11 94 aa8.88□□□□□ -0.99
SREBF1-202ENST00000355815 KRTAP1-5Q9BYS1 174 aa8.87□□□□□ -0.99
SREBF1-202ENST00000355815 A8MU10 97 aa8.86□□□□□ -0.99
SREBF1-202ENST00000355815 SPANXA2-OT1Q8N9U9 137 aa8.85□□□□□ -0.99
SREBF1-202ENST00000355815 RTL8CO15255 209 aa8.85□□□□□ -0.99
SREBF1-202ENST00000355815 C9orf163Q8N9P6 203 aa8.85□□□□□ -0.99
SREBF1-202ENST00000355815 A0A1B0GVX0 72 aa8.84□□□□□ -0.99
SREBF1-202ENST00000355815 TLX1NBP0CAT3 122 aa8.82□□□□□ -1
SREBF1-202ENST00000355815 SPINK7P58062 85 aa8.81□□□□□ -1
SREBF1-202ENST00000355815 FAM229AH3BQW9 127 aa8.8□□□□□ -1
SREBF1-202ENST00000355815 Q96NJ1 140 aa8.8□□□□□ -1
SREBF1-202ENST00000355815 SPRR4Q96PI1 79 aa8.79□□□□□ -1
SREBF1-202ENST00000355815 LINC01554Q52M75 96 aa8.79□□□□□ -1
SREBF1-202ENST00000355815 APLNQ9ULZ1 77 aa8.79□□□□□ -1
SREBF1-202ENST00000355815 WWC2-AS2Q96NR7 200 aa8.78□□□□□ -1
SREBF1-202ENST00000355815 Q75L30 129 aa8.77□□□□□ -1.01
SREBF1-202ENST00000355815 Q8N1X5 172 aa8.77□□□□□ -1.01
SREBF1-202ENST00000355815 CNBPP62633 177 aaKnown RBP8.76□□□□□ -1.01
SREBF1-202ENST00000355815 TGP01266 2768 aa8.75□□□□□ -1.01
SREBF1-202ENST00000355815 IGLV7-46A0A075B6I9 117 aa8.74□□□□□ -1.01
SREBF1-202ENST00000355815 PLA2G2DQ9UNK4 145 aa8.74□□□□□ -1.01
SREBF1-202ENST00000355815 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.73□□□□□ -1.01
SREBF1-202ENST00000355815 CRIPTQ9P021 101 aa8.71□□□□□ -1.02
SREBF1-202ENST00000355815 A0A087WTM6 91 aa8.7□□□□□ -1.02
SREBF1-202ENST00000355815 HRES1P13985 223 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms