RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 ATP5EP2Q5VTU8 51 aa15.77■□□□□ 0.11
CLK2-201ENST00000355560 FAM30AQ9NZY2 134 aa15.77■□□□□ 0.11
CLK2-201ENST00000355560 SACSQ9NZJ4 4579 aa15.75■□□□□ 0.11
CLK2-201ENST00000355560 SPRR1BP22528 89 aa15.74■□□□□ 0.11
CLK2-201ENST00000355560 A0A1W2PNM2 257 aa15.74■□□□□ 0.11
CLK2-201ENST00000355560 PKD1P98161 4303 aa15.72■□□□□ 0.11
CLK2-201ENST00000355560 Q8NBF4 154 aa15.71■□□□□ 0.11
CLK2-201ENST00000355560 CIRBP-AS1Q8TBR5 109 aa15.71■□□□□ 0.11
CLK2-201ENST00000355560 LCE6AA0A183 80 aa15.71■□□□□ 0.11
CLK2-201ENST00000355560 KRTAP10-1P60331 282 aa15.7■□□□□ 0.1
CLK2-201ENST00000355560 HAMPP81172 84 aa15.7■□□□□ 0.1
CLK2-201ENST00000355560 FAM236AA0A1B0GUQ0 79 aa15.69■□□□□ 0.1
CLK2-201ENST00000355560 FAM236BA0A1B0GV22 79 aa15.69■□□□□ 0.1
CLK2-201ENST00000355560 IGLV8-61A0A075B6I0 122 aa15.68■□□□□ 0.1
CLK2-201ENST00000355560 IGFL1Q6UW32 110 aa15.68■□□□□ 0.1
CLK2-201ENST00000355560 Q6ZSA8 131 aa15.68■□□□□ 0.1
CLK2-201ENST00000355560 SCXQ7RTU7 201 aa15.67■□□□□ 0.1
CLK2-201ENST00000355560 A0A0G2JQZ4 141 aa15.66■□□□□ 0.1
CLK2-201ENST00000355560 HIST1H4AP62805 103 aaKnown RBP15.66■□□□□ 0.1
CLK2-201ENST00000355560 A0A1B0GW54 56 aa15.65■□□□□ 0.1
CLK2-201ENST00000355560 SPRR4Q96PI1 79 aa15.65■□□□□ 0.1
CLK2-201ENST00000355560 A0A087WVE0 104 aa15.64■□□□□ 0.09
CLK2-201ENST00000355560 ZNF861PO60384 105 aa15.64■□□□□ 0.09
CLK2-201ENST00000355560 ANAPC13Q9BS18 74 aa15.64■□□□□ 0.09
CLK2-201ENST00000355560 NREPQ16612 68 aa15.62■□□□□ 0.09
CLK2-201ENST00000355560 CXCL6P80162 114 aa15.61■□□□□ 0.09
CLK2-201ENST00000355560 CRYGAP11844 174 aa15.59■□□□□ 0.09
CLK2-201ENST00000355560 ZNF706Q9Y5V0 76 aaPredicted RBP15.59■□□□□ 0.09
CLK2-201ENST00000355560 IGLV7-43P04211 117 aa15.58■□□□□ 0.08
CLK2-201ENST00000355560 LINC00483Q53H64 154 aa15.56■□□□□ 0.08
CLK2-201ENST00000355560 LINC00336Q6ZUF6 198 aa15.55■□□□□ 0.08
CLK2-201ENST00000355560 IGLV9-49A0A0B4J1Y8 123 aa15.51■□□□□ 0.07
CLK2-201ENST00000355560 BPY2O14599 106 aa15.49■□□□□ 0.07
CLK2-201ENST00000355560 C9orf153Q5TBE3 101 aa15.49■□□□□ 0.07
CLK2-201ENST00000355560 A0A087WSZ3 146 aa15.47■□□□□ 0.07
CLK2-201ENST00000355560 ANAPC11Q9NYG5 84 aa15.46■□□□□ 0.07
CLK2-201ENST00000355560 PKHD1P08F94 4074 aa15.45■□□□□ 0.06
CLK2-201ENST00000355560 LRP1BQ9NZR2 4599 aa15.44■□□□□ 0.06
CLK2-201ENST00000355560 ATOX1O00244 68 aa15.44■□□□□ 0.06
CLK2-201ENST00000355560 Q8N9L7 120 aa15.43■□□□□ 0.06
CLK2-201ENST00000355560 RYR2Q92736 4967 aa15.42■□□□□ 0.06
CLK2-201ENST00000355560 KMT2CQ8NEZ4 4911 aaKnown RBP15.4■□□□□ 0.06
CLK2-201ENST00000355560 MOBPQ13875 183 aa15.39■□□□□ 0.05
CLK2-201ENST00000355560 A0A1B0GVY2 172 aa15.38■□□□□ 0.05
CLK2-201ENST00000355560 IGKV4-1P06312 121 aa15.37■□□□□ 0.05
CLK2-201ENST00000355560 RPL37AP61513 92 aaKnown RBP15.37■□□□□ 0.05
CLK2-201ENST00000355560 CCDC179H3BU77 68 aa15.32■□□□□ 0.04
CLK2-201ENST00000355560 DSCR10P59022 87 aa15.31■□□□□ 0.04
CLK2-201ENST00000355560 DEFB116Q30KQ4 102 aa15.31■□□□□ 0.04
CLK2-201ENST00000355560 HRCT1Q6UXD1 115 aa15.28■□□□□ 0.04
CLK2-201ENST00000355560 DYNC1H1Q14204 4646 aaKnown RBP15.26■□□□□ 0.03
CLK2-201ENST00000355560 K7EQZ3 153 aa15.26■□□□□ 0.03
CLK2-201ENST00000355560 VPS13BQ7Z7G8 4022 aa15.25■□□□□ 0.03
CLK2-201ENST00000355560 COX7CP15954 63 aa15.24■□□□□ 0.03
CLK2-201ENST00000355560 SERP2Q8N6R1 65 aa15.24■□□□□ 0.03
CLK2-201ENST00000355560 UQCRQO14949 82 aa15.22■□□□□ 0.03
CLK2-201ENST00000355560 LINC00472Q9H8W2 130 aa15.22■□□□□ 0.03
CLK2-201ENST00000355560 A0A087X002 238 aa15.17■□□□□ 0.02
CLK2-201ENST00000355560 SS18L2Q9UHA2 77 aa15.16■□□□□ 0.02
CLK2-201ENST00000355560 SSBP3-AS1Q7Z2R9 100 aa15.14■□□□□ 0.01
CLK2-201ENST00000355560 SMR3BP02814 79 aaPredicted RBP15.13■□□□□ 0.01
CLK2-201ENST00000355560 KRTAP1-4P0C5Y4 121 aa15.13■□□□□ 0.01
CLK2-201ENST00000355560 FAM229BQ4G0N7 80 aa15.13■□□□□ 0.01
CLK2-201ENST00000355560 SMIM20Q8N5G0 67 aa15.13■□□□□ 0.01
CLK2-201ENST00000355560 Q96NJ1 140 aa15.11■□□□□ 0.01
CLK2-201ENST00000355560 TRAV7A0A075B6U4 112 aa15.1■□□□□ 0.01
CLK2-201ENST00000355560 KRTAP13-2Q52LG2 175 aa15.1■□□□□ 0.01
CLK2-201ENST00000355560 APOBP04114 4563 aaKnown RBP15.09■□□□□ 0.01
CLK2-201ENST00000355560 A8MWP4 228 aa15.09■□□□□ 0.01
CLK2-201ENST00000355560 J3KT08 172 aa15.08■□□□□ 0.01
CLK2-201ENST00000355560 HCG22E2RYF7 251 aa15.07■□□□□ 0
CLK2-201ENST00000355560 CD164Q04900 197 aa15.06■□□□□ 0
CLK2-201ENST00000355560 PRR15Q8IV56 129 aa15.05■□□□□ 0
CLK2-201ENST00000355560 SPINK6Q6UWN8 80 aa15.05■□□□□ -0
CLK2-201ENST00000355560 PLA2G1BP04054 148 aaKnown RBP15.02□□□□□ -0.01
CLK2-201ENST00000355560 OCR1Q9BZK8 76 aa15.01□□□□□ -0.01
CLK2-201ENST00000355560 RYR3Q15413 4870 aa15.01□□□□□ -0.01
CLK2-201ENST00000355560 WFDC13Q8IUB5 93 aa14.99□□□□□ -0.01
CLK2-201ENST00000355560 NDUFB1O75438 58 aa14.98□□□□□ -0.01
CLK2-201ENST00000355560 FAT1Q14517 4588 aa14.96□□□□□ -0.01
CLK2-201ENST00000355560 C20orf197Q8N268 126 aa14.96□□□□□ -0.01
CLK2-201ENST00000355560 CYSTM1Q9H1C7 97 aa14.95□□□□□ -0.02
CLK2-201ENST00000355560 KRTAP10-4P60372 401 aaPredicted RBP14.93□□□□□ -0.02
CLK2-201ENST00000355560 KRTAP29-1A8MX34 341 aaPredicted RBP14.92□□□□□ -0.02
CLK2-201ENST00000355560 CASC2Q6XLA1 102 aa14.91□□□□□ -0.02
CLK2-201ENST00000355560 CDK2AP2O75956 126 aa14.9□□□□□ -0.02
CLK2-201ENST00000355560 TYMSOSQ8TAI1 123 aa14.9□□□□□ -0.02
CLK2-201ENST00000355560 MMP24-AS1A0A0U1RRL7 71 aa14.88□□□□□ -0.03
CLK2-201ENST00000355560 ASB16-AS1Q495Z4 193 aa14.87□□□□□ -0.03
CLK2-201ENST00000355560 A0A1B0GVX0 72 aa14.86□□□□□ -0.03
CLK2-201ENST00000355560 IGHV6-1A0A0B4J1U7 121 aa14.85□□□□□ -0.03
CLK2-201ENST00000355560 PRR26Q8N8Z3 221 aa14.84□□□□□ -0.03
CLK2-201ENST00000355560 SNURFQ9Y675 71 aa14.83□□□□□ -0.04
CLK2-201ENST00000355560 KLKP1Q107X0 134 aa14.83□□□□□ -0.04
CLK2-201ENST00000355560 Q5XG85 94 aa14.83□□□□□ -0.04
CLK2-201ENST00000355560 TMEM254Q8TBM7 123 aa14.82□□□□□ -0.04
CLK2-201ENST00000355560 C8orf17Q9NRJ1 99 aa14.81□□□□□ -0.04
CLK2-201ENST00000355560 hDV103S1A0JD37 113 aa14.81□□□□□ -0.04
CLK2-201ENST00000355560 C4orf48Q5BLP8 95 aa14.8□□□□□ -0.04
CLK2-201ENST00000355560 LIMD2Q9BT23 127 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms