RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 PSORS1C2Q9UIG4 136 aa10.54□□□□□ -0.72
VPS13B-201ENST00000355155 HIGD2AQ9BW72 106 aa10.53□□□□□ -0.72
VPS13B-201ENST00000355155 UBL5Q9BZL1 73 aa10.53□□□□□ -0.72
VPS13B-201ENST00000355155 TGP01266 2768 aa10.52□□□□□ -0.73
VPS13B-201ENST00000355155 KRTAP10-1P60331 282 aa10.51□□□□□ -0.73
VPS13B-201ENST00000355155 C1orf137Q5JT78 98 aa10.51□□□□□ -0.73
VPS13B-201ENST00000355155 Q8NBF4 154 aa10.51□□□□□ -0.73
VPS13B-201ENST00000355155 C3orf22Q8N5N4 141 aa10.5□□□□□ -0.73
VPS13B-201ENST00000355155 FAM30AQ9NZY2 134 aa10.5□□□□□ -0.73
VPS13B-201ENST00000355155 ZNF861PO60384 105 aa10.5□□□□□ -0.73
VPS13B-201ENST00000355155 A0A1W2PNM2 257 aa10.49□□□□□ -0.73
VPS13B-201ENST00000355155 Q6ZVQ6 151 aa10.49□□□□□ -0.73
VPS13B-201ENST00000355155 ZNF706Q9Y5V0 76 aaPredicted RBP10.49□□□□□ -0.73
VPS13B-201ENST00000355155 CIRBP-AS1Q8TBR5 109 aa10.48□□□□□ -0.73
VPS13B-201ENST00000355155 F8WEM9 126 aa10.48□□□□□ -0.73
VPS13B-201ENST00000355155 PCP4P48539 62 aa10.48□□□□□ -0.73
VPS13B-201ENST00000355155 RPL37AP61513 92 aaKnown RBP10.48□□□□□ -0.73
VPS13B-201ENST00000355155 CXCL6P80162 114 aa10.47□□□□□ -0.73
VPS13B-201ENST00000355155 A0A1B0GVY2 172 aa10.46□□□□□ -0.73
VPS13B-201ENST00000355155 CRYGAP11844 174 aa10.46□□□□□ -0.73
VPS13B-201ENST00000355155 IGLV7-43P04211 117 aa10.45□□□□□ -0.74
VPS13B-201ENST00000355155 HIST1H4AP62805 103 aaKnown RBP10.45□□□□□ -0.74
VPS13B-201ENST00000355155 IGFL1Q6UW32 110 aa10.45□□□□□ -0.74
VPS13B-201ENST00000355155 SCXQ7RTU7 201 aa10.44□□□□□ -0.74
VPS13B-201ENST00000355155 IGKV3D-7A0A0C4DH55 119 aa10.39□□□□□ -0.75
VPS13B-201ENST00000355155 RYR2Q92736 4967 aa10.38□□□□□ -0.75
VPS13B-201ENST00000355155 NREPQ16612 68 aa10.35□□□□□ -0.75
VPS13B-201ENST00000355155 FAM236AA0A1B0GUQ0 79 aa10.31□□□□□ -0.76
VPS13B-201ENST00000355155 FAM236BA0A1B0GV22 79 aa10.31□□□□□ -0.76
VPS13B-201ENST00000355155 DYNC1H1Q14204 4646 aaKnown RBP10.31□□□□□ -0.76
VPS13B-201ENST00000355155 HAMPP81172 84 aa10.3□□□□□ -0.76
VPS13B-201ENST00000355155 LRP1BQ9NZR2 4599 aa10.29□□□□□ -0.76
VPS13B-201ENST00000355155 FAM229BQ4G0N7 80 aa10.27□□□□□ -0.77
VPS13B-201ENST00000355155 ATOX1O00244 68 aa10.26□□□□□ -0.77
VPS13B-201ENST00000355155 BPY2O14599 106 aa10.26□□□□□ -0.77
VPS13B-201ENST00000355155 ANAPC13Q9BS18 74 aa10.26□□□□□ -0.77
VPS13B-201ENST00000355155 IGKV4-1P06312 121 aa10.25□□□□□ -0.77
VPS13B-201ENST00000355155 A0A087WVE0 104 aa10.24□□□□□ -0.77
VPS13B-201ENST00000355155 A0A0G2JQZ4 141 aa10.24□□□□□ -0.77
VPS13B-201ENST00000355155 CD164Q04900 197 aa10.24□□□□□ -0.77
VPS13B-201ENST00000355155 SSBP3-AS1Q7Z2R9 100 aa10.23□□□□□ -0.77
VPS13B-201ENST00000355155 A0A087WSZ3 146 aa10.22□□□□□ -0.77
VPS13B-201ENST00000355155 LINC00472Q9H8W2 130 aa10.22□□□□□ -0.77
VPS13B-201ENST00000355155 DSCR10P59022 87 aa10.21□□□□□ -0.77
VPS13B-201ENST00000355155 IGLV9-49A0A0B4J1Y8 123 aa10.2□□□□□ -0.78
VPS13B-201ENST00000355155 C9orf153Q5TBE3 101 aa10.2□□□□□ -0.78
VPS13B-201ENST00000355155 APOBP04114 4563 aaKnown RBP10.19□□□□□ -0.78
VPS13B-201ENST00000355155 MOBPQ13875 183 aa10.19□□□□□ -0.78
VPS13B-201ENST00000355155 PKHD1P08F94 4074 aa10.18□□□□□ -0.78
VPS13B-201ENST00000355155 KRTAP1-4P0C5Y4 121 aa10.18□□□□□ -0.78
VPS13B-201ENST00000355155 PKHD1L1Q86WI1 4243 aa10.17□□□□□ -0.78
VPS13B-201ENST00000355155 SPINK6Q6UWN8 80 aa10.17□□□□□ -0.78
VPS13B-201ENST00000355155 VPS13BQ7Z7G8 4022 aa10.17□□□□□ -0.78
VPS13B-201ENST00000355155 J3KT08 172 aa10.16□□□□□ -0.78
VPS13B-201ENST00000355155 KRTAP10-4P60372 401 aaPredicted RBP10.15□□□□□ -0.78
VPS13B-201ENST00000355155 ASB16-AS1Q495Z4 193 aa10.15□□□□□ -0.78
VPS13B-201ENST00000355155 SMIM20Q8N5G0 67 aa10.15□□□□□ -0.78
VPS13B-201ENST00000355155 SS18L2Q9UHA2 77 aa10.15□□□□□ -0.78
VPS13B-201ENST00000355155 Q96NJ1 140 aa10.15□□□□□ -0.78
VPS13B-201ENST00000355155 ANAPC11Q9NYG5 84 aa10.15□□□□□ -0.78
VPS13B-201ENST00000355155 KMT2CQ8NEZ4 4911 aaKnown RBP10.14□□□□□ -0.79
VPS13B-201ENST00000355155 SRRM2Q9UQ35 2752 aaKnown RBP10.13□□□□□ -0.79
VPS13B-201ENST00000355155 Q5XG85 94 aa10.13□□□□□ -0.79
VPS13B-201ENST00000355155 COX7CP15954 63 aa10.13□□□□□ -0.79
VPS13B-201ENST00000355155 SERP2Q8N6R1 65 aa10.13□□□□□ -0.79
VPS13B-201ENST00000355155 KRTAP13-2Q52LG2 175 aa10.12□□□□□ -0.79
VPS13B-201ENST00000355155 UQCRQO14949 82 aa10.11□□□□□ -0.79
VPS13B-201ENST00000355155 A8MWP4 228 aa10.09□□□□□ -0.79
VPS13B-201ENST00000355155 K7EQZ3 153 aa10.09□□□□□ -0.79
VPS13B-201ENST00000355155 A0A087X002 238 aa10.09□□□□□ -0.79
VPS13B-201ENST00000355155 Q8N9L7 120 aa10.09□□□□□ -0.79
VPS13B-201ENST00000355155 TRAV7A0A075B6U4 112 aa10.08□□□□□ -0.8
VPS13B-201ENST00000355155 PRR15Q8IV56 129 aa10.06□□□□□ -0.8
VPS13B-201ENST00000355155 CCDC179H3BU77 68 aa10.06□□□□□ -0.8
VPS13B-201ENST00000355155 KRTAP29-1A8MX34 341 aaPredicted RBP10.03□□□□□ -0.8
VPS13B-201ENST00000355155 OCR1Q9BZK8 76 aa10.02□□□□□ -0.8
VPS13B-201ENST00000355155 HCG22E2RYF7 251 aa10.02□□□□□ -0.81
VPS13B-201ENST00000355155 CDK2AP2O75956 126 aa10.02□□□□□ -0.81
VPS13B-201ENST00000355155 RPS29P62273 56 aaKnown RBP10□□□□□ -0.81
VPS13B-201ENST00000355155 DEFB116Q30KQ4 102 aa9.98□□□□□ -0.81
VPS13B-201ENST00000355155 HRCT1Q6UXD1 115 aa9.98□□□□□ -0.81
VPS13B-201ENST00000355155 PLA2G1BP04054 148 aaKnown RBP9.97□□□□□ -0.81
VPS13B-201ENST00000355155 NDUFB1O75438 58 aa9.95□□□□□ -0.82
VPS13B-201ENST00000355155 RYR3Q15413 4870 aa9.95□□□□□ -0.82
VPS13B-201ENST00000355155 MMP24-AS1A0A0U1RRL7 71 aa9.95□□□□□ -0.82
VPS13B-201ENST00000355155 SMR3BP02814 79 aaPredicted RBP9.94□□□□□ -0.82
VPS13B-201ENST00000355155 A0A1B0GVX0 72 aa9.93□□□□□ -0.82
VPS13B-201ENST00000355155 LIMD2Q9BT23 127 aa9.92□□□□□ -0.82
VPS13B-201ENST00000355155 SPINK1P00995 79 aa9.92□□□□□ -0.82
VPS13B-201ENST00000355155 TYMSOSQ8TAI1 123 aa9.92□□□□□ -0.82
VPS13B-201ENST00000355155 SPAG11AQ6PDA7 123 aa9.91□□□□□ -0.82
VPS13B-201ENST00000355155 KLKP1Q107X0 134 aa9.91□□□□□ -0.82
VPS13B-201ENST00000355155 CASC2Q6XLA1 102 aa9.89□□□□□ -0.83
VPS13B-201ENST00000355155 C8orf17Q9NRJ1 99 aa9.89□□□□□ -0.83
VPS13B-201ENST00000355155 HSPG2P98160 4391 aa9.87□□□□□ -0.83
VPS13B-201ENST00000355155 C1orf195Q5TG92 126 aa9.87□□□□□ -0.83
VPS13B-201ENST00000355155 C8orf87E5RJ46 101 aa9.86□□□□□ -0.83
VPS13B-201ENST00000355155 FAM229AH3BQW9 127 aa9.86□□□□□ -0.83
VPS13B-201ENST00000355155 FAT1Q14517 4588 aa9.85□□□□□ -0.83
VPS13B-201ENST00000355155 PRR26Q8N8Z3 221 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms