RNA–Protein interactions for RNA: ENST00000354571.5

TWIST1-202, Transcript of twist family bHLH transcription factor 1, humanhuman

TSL 2

Gene TWIST1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWIST1-202ENST00000354571 LINC01600Q96MT4 127 aa13.48□□□□□ -0.25
TWIST1-202ENST00000354571 F8W1H4 67 aa13.47□□□□□ -0.25
TWIST1-202ENST00000354571 SMIM29Q86T20 159 aa13.47□□□□□ -0.25
TWIST1-202ENST00000354571 KRTAP1-4P0C5Y4 121 aa13.46□□□□□ -0.25
TWIST1-202ENST00000354571 LAMTOR3Q9UHA4 124 aa13.46□□□□□ -0.25
TWIST1-202ENST00000354571 SMCPP49901 116 aaPredicted RBP13.45□□□□□ -0.26
TWIST1-202ENST00000354571 FAM229BQ4G0N7 80 aa13.45□□□□□ -0.26
TWIST1-202ENST00000354571 NDUFV3P56181 108 aaKnown RBP13.44□□□□□ -0.26
TWIST1-202ENST00000354571 ANAPC11Q9NYG5 84 aa13.43□□□□□ -0.26
TWIST1-202ENST00000354571 C3orf22Q8N5N4 141 aa13.42□□□□□ -0.26
TWIST1-202ENST00000354571 SRRM2Q9UQ35 2752 aaKnown RBP13.41□□□□□ -0.26
TWIST1-202ENST00000354571 F8WEM9 126 aa13.4□□□□□ -0.26
TWIST1-202ENST00000354571 CRYGAP11844 174 aa13.37□□□□□ -0.27
TWIST1-202ENST00000354571 PKHD1L1Q86WI1 4243 aa13.35□□□□□ -0.27
TWIST1-202ENST00000354571 A0A087X002 238 aa13.35□□□□□ -0.27
TWIST1-202ENST00000354571 JMJD7-PLA2G4BH0Y9G9 81 aa13.35□□□□□ -0.27
TWIST1-202ENST00000354571 IGLV8-61A0A075B6I0 122 aa13.34□□□□□ -0.27
TWIST1-202ENST00000354571 IGLV9-49A0A0B4J1Y8 123 aa13.34□□□□□ -0.27
TWIST1-202ENST00000354571 KRTAP4-5Q9BYR2 181 aa13.34□□□□□ -0.27
TWIST1-202ENST00000354571 RBM3P98179 157 aaKnown RBP13.32□□□□□ -0.28
TWIST1-202ENST00000354571 C9orf153Q5TBE3 101 aa13.32□□□□□ -0.28
TWIST1-202ENST00000354571 OBSCN-AS1Q96MR7 158 aa13.32□□□□□ -0.28
TWIST1-202ENST00000354571 HERC2O95714 4834 aa13.31□□□□□ -0.28
TWIST1-202ENST00000354571 KRTAP13-2Q52LG2 175 aa13.31□□□□□ -0.28
TWIST1-202ENST00000354571 TEN1Q86WV5 123 aa13.31□□□□□ -0.28
TWIST1-202ENST00000354571 Q8NBF4 154 aa13.31□□□□□ -0.28
TWIST1-202ENST00000354571 MOBPQ13875 183 aa13.3□□□□□ -0.28
TWIST1-202ENST00000354571 A0A1B0GV72 72 aa13.29□□□□□ -0.28
TWIST1-202ENST00000354571 Q6JHZ5 121 aa13.29□□□□□ -0.28
TWIST1-202ENST00000354571 ETDBQ3ZM63 59 aa13.28□□□□□ -0.28
TWIST1-202ENST00000354571 SSBP3-AS1Q7Z2R9 100 aa13.28□□□□□ -0.28
TWIST1-202ENST00000354571 PRR26Q8N8Z3 221 aa13.28□□□□□ -0.28
TWIST1-202ENST00000354571 DSCR8Q96T75 97 aa13.26□□□□□ -0.29
TWIST1-202ENST00000354571 TYMSOSQ8TAI1 123 aa13.25□□□□□ -0.29
TWIST1-202ENST00000354571 TRBV7-4A0A0J9YYF1 115 aa13.24□□□□□ -0.29
TWIST1-202ENST00000354571 IGFL1Q6UW32 110 aa13.23□□□□□ -0.29
TWIST1-202ENST00000354571 LOC110117498A0A087WWA1 95 aa13.22□□□□□ -0.29
TWIST1-202ENST00000354571 PDE6GP18545 87 aa13.22□□□□□ -0.29
TWIST1-202ENST00000354571 C14orf132Q9NPU4 83 aa13.22□□□□□ -0.29
TWIST1-202ENST00000354571 OXTP01178 125 aa13.18□□□□□ -0.3
TWIST1-202ENST00000354571 C21orf62-AS1Q17RA5 79 aa13.18□□□□□ -0.3
TWIST1-202ENST00000354571 A0A0G2JQZ4 141 aa13.17□□□□□ -0.3
TWIST1-202ENST00000354571 KRTAP10-8P60410 259 aa13.17□□□□□ -0.3
TWIST1-202ENST00000354571 Q6ZQT0 140 aa13.17□□□□□ -0.3
TWIST1-202ENST00000354571 A0A1W2PNM2 257 aa13.13□□□□□ -0.31
TWIST1-202ENST00000354571 CCKP06307 115 aa13.13□□□□□ -0.31
TWIST1-202ENST00000354571 CD164Q04900 197 aa13.13□□□□□ -0.31
TWIST1-202ENST00000354571 Q6Q795 121 aa13.12□□□□□ -0.31
TWIST1-202ENST00000354571 KRTAP29-1A8MX34 341 aaPredicted RBP13.1□□□□□ -0.31
TWIST1-202ENST00000354571 LINC00304Q8N9R0 145 aa13.1□□□□□ -0.31
TWIST1-202ENST00000354571 VPS25Q9BRG1 176 aa13.1□□□□□ -0.31
TWIST1-202ENST00000354571 SPAG11AQ6PDA7 123 aa13.09□□□□□ -0.31
TWIST1-202ENST00000354571 FLG2Q5D862 2391 aaPredicted RBP13.08□□□□□ -0.32
TWIST1-202ENST00000354571 C4orf48Q5BLP8 95 aa13.08□□□□□ -0.32
TWIST1-202ENST00000354571 FAT3Q8TDW7 4589 aa13.07□□□□□ -0.32
TWIST1-202ENST00000354571 MT1HL1P0DM35 61 aa13.07□□□□□ -0.32
TWIST1-202ENST00000354571 HRCT1Q6UXD1 115 aa13.07□□□□□ -0.32
TWIST1-202ENST00000354571 A0A1B0GW54 56 aa13.06□□□□□ -0.32
TWIST1-202ENST00000354571 TRBV7-7A0A0K0K1E9 115 aa13.05□□□□□ -0.32
TWIST1-202ENST00000354571 LRP1Q07954 4544 aaKnown RBP13.05□□□□□ -0.32
TWIST1-202ENST00000354571 ABCA13Q86UQ4 5058 aa13.03□□□□□ -0.32
TWIST1-202ENST00000354571 SPINK1P00995 79 aa13.03□□□□□ -0.32
TWIST1-202ENST00000354571 RPS29P62273 56 aaKnown RBP13□□□□□ -0.33
TWIST1-202ENST00000354571 A0A087WSZ3 146 aa12.98□□□□□ -0.33
TWIST1-202ENST00000354571 J3QR89 54 aa12.98□□□□□ -0.33
TWIST1-202ENST00000354571 Q5XG85 94 aa12.96□□□□□ -0.33
TWIST1-202ENST00000354571 LIMD2Q9BT23 127 aa12.96□□□□□ -0.33
TWIST1-202ENST00000354571 SS18L2Q9UHA2 77 aa12.95□□□□□ -0.34
TWIST1-202ENST00000354571 FAM240AA0A1B0GVK7 77 aa12.94□□□□□ -0.34
TWIST1-202ENST00000354571 ACYP1P07311 99 aa12.94□□□□□ -0.34
TWIST1-202ENST00000354571 MYCBP2O75592 4640 aa12.94□□□□□ -0.34
TWIST1-202ENST00000354571 TNXBP22105 4242 aa12.93□□□□□ -0.34
TWIST1-202ENST00000354571 J3QL48 77 aa12.92□□□□□ -0.34
TWIST1-202ENST00000354571 ASB16-AS1Q495Z4 193 aa12.9□□□□□ -0.34
TWIST1-202ENST00000354571 K7ERU9 68 aa12.89□□□□□ -0.35
TWIST1-202ENST00000354571 LINC00846Q9NV44 126 aa12.89□□□□□ -0.35
TWIST1-202ENST00000354571 NREPQ16612 68 aa12.85□□□□□ -0.35
TWIST1-202ENST00000354571 UBL5Q9BZL1 73 aa12.84□□□□□ -0.35
TWIST1-202ENST00000354571 Q6ZVQ6 151 aa12.82□□□□□ -0.36
TWIST1-202ENST00000354571 LINC00472Q9H8W2 130 aa12.8□□□□□ -0.36
TWIST1-202ENST00000354571 C1orf195Q5TG92 126 aa12.78□□□□□ -0.36
TWIST1-202ENST00000354571 Q96NJ1 140 aa12.78□□□□□ -0.36
TWIST1-202ENST00000354571 DMBT1Q9UGM3 2413 aaPredicted RBP12.73□□□□□ -0.37
TWIST1-202ENST00000354571 J3KT08 172 aa12.73□□□□□ -0.37
TWIST1-202ENST00000354571 DEFB116Q30KQ4 102 aa12.71□□□□□ -0.37
TWIST1-202ENST00000354571 PCLOQ9Y6V0 5065 aa12.7□□□□□ -0.38
TWIST1-202ENST00000354571 IGKV4-1P06312 121 aa12.7□□□□□ -0.38
TWIST1-202ENST00000354571 RETNLBQ9BQ08 111 aa12.7□□□□□ -0.38
TWIST1-202ENST00000354571 BPY2O14599 106 aa12.69□□□□□ -0.38
TWIST1-202ENST00000354571 SIGMAR1Q99720 223 aa12.69□□□□□ -0.38
TWIST1-202ENST00000354571 LINC00643Q86TS7 51 aa12.68□□□□□ -0.38
TWIST1-202ENST00000354571 CDIP1Q9H305 208 aa12.68□□□□□ -0.38
TWIST1-202ENST00000354571 FP248Q71RG6 208 aaPredicted RBP12.66□□□□□ -0.38
TWIST1-202ENST00000354571 ATP5EP2Q5VTU8 51 aa12.64□□□□□ -0.39
TWIST1-202ENST00000354571 CXCL6P80162 114 aa12.63□□□□□ -0.39
TWIST1-202ENST00000354571 DSCR10P59022 87 aa12.61□□□□□ -0.39
TWIST1-202ENST00000354571 A8MWP4 228 aa12.6□□□□□ -0.39
TWIST1-202ENST00000354571 NDUFB1O75438 58 aa12.59□□□□□ -0.39
TWIST1-202ENST00000354571 IGKV3D-7A0A0C4DH55 119 aa12.57□□□□□ -0.4
TWIST1-202ENST00000354571 IGLV7-46A0A075B6I9 117 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms