RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 TCL1BO95988 128 aa7.67□□□□□ -1.18
PRPF40A-201ENST00000354363 M0R2T5 61 aa7.64□□□□□ -1.19
PRPF40A-201ENST00000354363 SMCPP49901 116 aaPredicted RBP7.64□□□□□ -1.19
PRPF40A-201ENST00000354363 COX6B2Q6YFQ2 88 aa7.64□□□□□ -1.19
PRPF40A-201ENST00000354363 F8WEM9 126 aa7.63□□□□□ -1.19
PRPF40A-201ENST00000354363 LINC00575Q6W349 94 aa7.63□□□□□ -1.19
PRPF40A-201ENST00000354363 VAMP3Q15836 100 aa7.61□□□□□ -1.19
PRPF40A-201ENST00000354363 Q6ZQY7 126 aa7.6□□□□□ -1.19
PRPF40A-201ENST00000354363 SNRPEP62304 92 aaKnown RBP7.6□□□□□ -1.19
PRPF40A-201ENST00000354363 Q6JHZ5 121 aa7.6□□□□□ -1.19
PRPF40A-201ENST00000354363 TRBV7-7A0A0K0K1E9 115 aa7.59□□□□□ -1.19
PRPF40A-201ENST00000354363 hADV29S1A0JD25 119 aa7.59□□□□□ -1.19
PRPF40A-201ENST00000354363 IGFL1Q6UW32 110 aa7.59□□□□□ -1.19
PRPF40A-201ENST00000354363 CLEC2BQ92478 149 aa7.59□□□□□ -1.19
PRPF40A-201ENST00000354363 OCIAD2Q56VL3 154 aa7.56□□□□□ -1.2
PRPF40A-201ENST00000354363 Q75L30 129 aa7.54□□□□□ -1.2
PRPF40A-201ENST00000354363 OBSCN-AS1Q96MR7 158 aa7.54□□□□□ -1.2
PRPF40A-201ENST00000354363 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.53□□□□□ -1.2
PRPF40A-201ENST00000354363 ATP11AUNQ6ZP68 121 aa7.52□□□□□ -1.2
PRPF40A-201ENST00000354363 HSBP1L1C9JCN9 74 aa7.51□□□□□ -1.21
PRPF40A-201ENST00000354363 PPDPFLQ8WWR9 84 aa7.51□□□□□ -1.21
PRPF40A-201ENST00000354363 Q6Q795 121 aa7.5□□□□□ -1.21
PRPF40A-201ENST00000354363 HIST3H2BBQ8N257 126 aa7.5□□□□□ -1.21
PRPF40A-201ENST00000354363 C12orf57Q99622 126 aa7.5□□□□□ -1.21
PRPF40A-201ENST00000354363 HIST1H2BLQ99880 126 aa7.5□□□□□ -1.21
PRPF40A-201ENST00000354363 H3BUT2 72 aa7.49□□□□□ -1.21
PRPF40A-201ENST00000354363 BVES-AS1Q5T3Y7 98 aa7.49□□□□□ -1.21
PRPF40A-201ENST00000354363 SNHG12Q9BXW3 62 aa7.49□□□□□ -1.21
PRPF40A-201ENST00000354363 LST1O00453 97 aa7.49□□□□□ -1.21
PRPF40A-201ENST00000354363 S100A2P29034 98 aa7.47□□□□□ -1.21
PRPF40A-201ENST00000354363 Q96NJ1 140 aa7.47□□□□□ -1.21
PRPF40A-201ENST00000354363 SCGB1D1O95968 90 aa7.46□□□□□ -1.21
PRPF40A-201ENST00000354363 HIST1H4GQ99525 98 aa7.45□□□□□ -1.22
PRPF40A-201ENST00000354363 C20orf166-AS1Q96NR2 134 aa7.43□□□□□ -1.22
PRPF40A-201ENST00000354363 SS18L2Q9UHA2 77 aa7.43□□□□□ -1.22
PRPF40A-201ENST00000354363 A8MUU9 505 aa7.41□□□□□ -1.22
PRPF40A-201ENST00000354363 COX8AP10176 69 aa7.41□□□□□ -1.22
PRPF40A-201ENST00000354363 TEN1Q86WV5 123 aa7.41□□□□□ -1.22
PRPF40A-201ENST00000354363 CFC1P0CG37 223 aa7.4□□□□□ -1.22
PRPF40A-201ENST00000354363 NDUFV3P56181 108 aaKnown RBP7.39□□□□□ -1.23
PRPF40A-201ENST00000354363 FAM218AQ96MZ4 157 aa7.39□□□□□ -1.23
PRPF40A-201ENST00000354363 A0A087WSZ3 146 aa7.38□□□□□ -1.23
PRPF40A-201ENST00000354363 DLEU1O43261 78 aa7.38□□□□□ -1.23
PRPF40A-201ENST00000354363 RAB37Q96AX2 223 aa7.38□□□□□ -1.23
PRPF40A-201ENST00000354363 KRTAP9-8Q9BYQ0 159 aa7.38□□□□□ -1.23
PRPF40A-201ENST00000354363 H0YGX0 51 aa7.37□□□□□ -1.23
PRPF40A-201ENST00000354363 SNCGO76070 127 aa7.37□□□□□ -1.23
PRPF40A-201ENST00000354363 S100A6P06703 90 aa7.37□□□□□ -1.23
PRPF40A-201ENST00000354363 TRBV20-1A0A075B6N2 111 aa7.35□□□□□ -1.23
PRPF40A-201ENST00000354363 A0A0B4J2C4 111 aa7.34□□□□□ -1.23
PRPF40A-201ENST00000354363 DSCR10P59022 87 aa7.34□□□□□ -1.23
PRPF40A-201ENST00000354363 H3BMG7 143 aa7.34□□□□□ -1.24
PRPF40A-201ENST00000354363 C14orf144Q96I85 54 aa7.33□□□□□ -1.24
PRPF40A-201ENST00000354363 HIGD1BQ9P298 99 aa7.33□□□□□ -1.24
PRPF40A-201ENST00000354363 A0A1B0GX51 115 aa7.3□□□□□ -1.24
PRPF40A-201ENST00000354363 A0A1W2PNM2 257 aa7.3□□□□□ -1.24
PRPF40A-201ENST00000354363 FABP2P12104 132 aa7.3□□□□□ -1.24
PRPF40A-201ENST00000354363 KRTAP16-1A8MUX0 517 aa7.3□□□□□ -1.24
PRPF40A-201ENST00000354363 GHRHP01286 108 aa7.3□□□□□ -1.24
PRPF40A-201ENST00000354363 SIGMAR1Q99720 223 aa7.3□□□□□ -1.24
PRPF40A-201ENST00000354363 USH2AO75445 5202 aa7.29□□□□□ -1.24
PRPF40A-201ENST00000354363 C2orf91Q6ZV80 131 aa7.29□□□□□ -1.24
PRPF40A-201ENST00000354363 SSPOA2VEC9 5147 aa7.29□□□□□ -1.24
PRPF40A-201ENST00000354363 PAM16Q9Y3D7 125 aa7.28□□□□□ -1.24
PRPF40A-201ENST00000354363 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.27□□□□□ -1.25
PRPF40A-201ENST00000354363 LINC00313P59037 77 aa7.27□□□□□ -1.25
PRPF40A-201ENST00000354363 SPATA45Q537H7 98 aa7.27□□□□□ -1.25
PRPF40A-201ENST00000354363 CEND1Q8N111 149 aa7.27□□□□□ -1.25
PRPF40A-201ENST00000354363 PRO1854Q9UHT4 67 aa7.27□□□□□ -1.25
PRPF40A-201ENST00000354363 IGKV4-1P06312 121 aa7.26□□□□□ -1.25
PRPF40A-201ENST00000354363 FAM236DA0A1B0GTK5 79 aa7.24□□□□□ -1.25
PRPF40A-201ENST00000354363 TRIAP1O43715 76 aa7.24□□□□□ -1.25
PRPF40A-201ENST00000354363 MT2AP02795 61 aa7.24□□□□□ -1.25
PRPF40A-201ENST00000354363 FAM236CP0DP71 79 aa7.24□□□□□ -1.25
PRPF40A-201ENST00000354363 S100A1P23297 94 aa7.24□□□□□ -1.25
PRPF40A-201ENST00000354363 TRBV7-4A0A0J9YYF1 115 aa7.23□□□□□ -1.25
PRPF40A-201ENST00000354363 KRTAP9-7A8MTY7 169 aa7.23□□□□□ -1.25
PRPF40A-201ENST00000354363 NOTCH2NLQ7Z3S9 236 aa7.23□□□□□ -1.25
PRPF40A-201ENST00000354363 ANKRD29Q8N6D5 301 aa7.23□□□□□ -1.25
PRPF40A-201ENST00000354363 TMEM238LA0A1B0GVL6 79 aa7.23□□□□□ -1.25
PRPF40A-201ENST00000354363 A6NJY4 79 aa7.23□□□□□ -1.25
PRPF40A-201ENST00000354363 FXYD2P54710 66 aa7.23□□□□□ -1.25
PRPF40A-201ENST00000354363 MPLKIPQ8TAP9 179 aa7.23□□□□□ -1.25
PRPF40A-201ENST00000354363 VAMP8Q9BV40 100 aa7.23□□□□□ -1.25
PRPF40A-201ENST00000354363 HRES1P13985 223 aa7.22□□□□□ -1.25
PRPF40A-201ENST00000354363 A0A1B0GV72 72 aa7.21□□□□□ -1.26
PRPF40A-201ENST00000354363 DEFB116Q30KQ4 102 aa7.2□□□□□ -1.26
PRPF40A-201ENST00000354363 LINC00472Q9H8W2 130 aa7.2□□□□□ -1.26
PRPF40A-201ENST00000354363 ORMDL1Q9P0S3 153 aa7.2□□□□□ -1.26
PRPF40A-201ENST00000354363 RBM12B-AS1Q9P1G2 102 aa7.2□□□□□ -1.26
PRPF40A-201ENST00000354363 DNAL4O96015 105 aa7.19□□□□□ -1.26
PRPF40A-201ENST00000354363 MT1FP04733 61 aa7.19□□□□□ -1.26
PRPF40A-201ENST00000354363 H3BQ85 93 aa7.18□□□□□ -1.26
PRPF40A-201ENST00000354363 IGHV6-1A0A0B4J1U7 121 aa7.16□□□□□ -1.26
PRPF40A-201ENST00000354363 CCKP06307 115 aa7.16□□□□□ -1.26
PRPF40A-201ENST00000354363 TMEM256-PLSCR3K7ERE1 68 aa7.16□□□□□ -1.26
PRPF40A-201ENST00000354363 TRACP01848 142 aa7.16□□□□□ -1.26
PRPF40A-201ENST00000354363 PSMB2P49721 201 aa7.15□□□□□ -1.27
PRPF40A-201ENST00000354363 KRTAP9-3Q9BYQ3 159 aa7.15□□□□□ -1.27
PRPF40A-201ENST00000354363 FCGBPQ9Y6R7 5405 aaPredicted RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 164.7 ms