RNA–Protein interactions for RNA: ENST00000354192.7

APP-203, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-203ENST00000354192 SMIM29Q86T20 159 aa11.37□□□□□ -0.59
APP-203ENST00000354192 C9orf163Q8N9P6 203 aa11.37□□□□□ -0.59
APP-203ENST00000354192 K7EQZ3 153 aa11.36□□□□□ -0.59
APP-203ENST00000354192 LRCOL1A6NCL2 159 aa11.35□□□□□ -0.59
APP-203ENST00000354192 ANAPC11Q9NYG5 84 aa11.35□□□□□ -0.59
APP-203ENST00000354192 STARD9Q9P2P6 4700 aa11.32□□□□□ -0.6
APP-203ENST00000354192 TNP2Q05952 138 aa11.3□□□□□ -0.6
APP-203ENST00000354192 DNAH1Q9P2D7 4330 aa11.3□□□□□ -0.6
APP-203ENST00000354192 TMEM258P61165 79 aa11.3□□□□□ -0.6
APP-203ENST00000354192 J3KT08 172 aa11.29□□□□□ -0.6
APP-203ENST00000354192 KMT2AQ03164 3969 aa11.27□□□□□ -0.6
APP-203ENST00000354192 TMEM254Q8TBM7 123 aa11.27□□□□□ -0.61
APP-203ENST00000354192 A0A087WTM6 91 aa11.26□□□□□ -0.61
APP-203ENST00000354192 FAM236DA0A1B0GTK5 79 aa11.26□□□□□ -0.61
APP-203ENST00000354192 FAM236CP0DP71 79 aa11.26□□□□□ -0.61
APP-203ENST00000354192 PRR4Q16378 134 aa11.26□□□□□ -0.61
APP-203ENST00000354192 RTL8CO15255 209 aa11.25□□□□□ -0.61
APP-203ENST00000354192 DSCR10P59022 87 aa11.25□□□□□ -0.61
APP-203ENST00000354192 H0Y9J4 135 aa11.24□□□□□ -0.61
APP-203ENST00000354192 Q6ZRN7 208 aaPredicted RBP11.24□□□□□ -0.61
APP-203ENST00000354192 H7BZZ5 65 aa11.24□□□□□ -0.61
APP-203ENST00000354192 IGLV5-52A0A0A0MRZ9 124 aa11.21□□□□□ -0.62
APP-203ENST00000354192 OXTP01178 125 aa11.21□□□□□ -0.62
APP-203ENST00000354192 LINC00474Q9P2X8 69 aa11.2□□□□□ -0.62
APP-203ENST00000354192 SPRR4Q96PI1 79 aa11.2□□□□□ -0.62
APP-203ENST00000354192 BCE1O60756 84 aa11.19□□□□□ -0.62
APP-203ENST00000354192 C1orf134Q5TEV5 83 aa11.17□□□□□ -0.62
APP-203ENST00000354192 OCR1Q9BZK8 76 aa11.16□□□□□ -0.62
APP-203ENST00000354192 PSORS1C2Q9UIG4 136 aa11.16□□□□□ -0.62
APP-203ENST00000354192 HCG22E2RYF7 251 aa11.15□□□□□ -0.62
APP-203ENST00000354192 KLKP1Q107X0 134 aa11.14□□□□□ -0.63
APP-203ENST00000354192 MOBPQ13875 183 aa11.14□□□□□ -0.63
APP-203ENST00000354192 SPACA4Q8TDM5 124 aa11.14□□□□□ -0.63
APP-203ENST00000354192 SPINK6Q6UWN8 80 aa11.13□□□□□ -0.63
APP-203ENST00000354192 C4orf26Q17RF5 130 aa11.09□□□□□ -0.63
APP-203ENST00000354192 FRAS1Q86XX4 4008 aa11.08□□□□□ -0.63
APP-203ENST00000354192 NDUFS5O43920 106 aa11.06□□□□□ -0.64
APP-203ENST00000354192 CASC2Q6XLA1 102 aa11.06□□□□□ -0.64
APP-203ENST00000354192 MPLKIPQ8TAP9 179 aa11.05□□□□□ -0.64
APP-203ENST00000354192 LINC00208Q96KT6 92 aa11.05□□□□□ -0.64
APP-203ENST00000354192 PKIGQ9Y2B9 76 aa11.05□□□□□ -0.64
APP-203ENST00000354192 CIRBP-AS1Q8TBR5 109 aa11.04□□□□□ -0.64
APP-203ENST00000354192 A0A1B0GW54 56 aa11.03□□□□□ -0.64
APP-203ENST00000354192 IGHV6-1A0A0B4J1U7 121 aa11.02□□□□□ -0.64
APP-203ENST00000354192 KRTAP10-2P60368 255 aa11.02□□□□□ -0.64
APP-203ENST00000354192 A0A0U1RQV1 116 aa11.02□□□□□ -0.65
APP-203ENST00000354192 Q6ZR54 194 aa11.01□□□□□ -0.65
APP-203ENST00000354192 VPS13DQ5THJ4 4388 aa11□□□□□ -0.65
APP-203ENST00000354192 NDUFB1O75438 58 aa10.99□□□□□ -0.65
APP-203ENST00000354192 RPS28P62857 69 aaKnown RBP10.99□□□□□ -0.65
APP-203ENST00000354192 DNAH2Q9P225 4427 aa10.99□□□□□ -0.65
APP-203ENST00000354192 IGLV8-61A0A075B6I0 122 aa10.98□□□□□ -0.65
APP-203ENST00000354192 CDK2AP2O75956 126 aa10.98□□□□□ -0.65
APP-203ENST00000354192 NDUFC1O43677 76 aa10.97□□□□□ -0.65
APP-203ENST00000354192 MP68P56378 58 aa10.97□□□□□ -0.65
APP-203ENST00000354192 PRR15Q8IV56 129 aa10.97□□□□□ -0.65
APP-203ENST00000354192 SERP1Q9Y6X1 66 aa10.97□□□□□ -0.65
APP-203ENST00000354192 KRTAP13-1Q8IUC0 172 aa10.97□□□□□ -0.65
APP-203ENST00000354192 ZNF861PO60384 105 aa10.96□□□□□ -0.65
APP-203ENST00000354192 SPRR1BP22528 89 aa10.96□□□□□ -0.66
APP-203ENST00000354192 A8MWP4 228 aa10.94□□□□□ -0.66
APP-203ENST00000354192 LINC00472Q9H8W2 130 aa10.94□□□□□ -0.66
APP-203ENST00000354192 H0Y9P7 68 aa10.93□□□□□ -0.66
APP-203ENST00000354192 FAM229BQ4G0N7 80 aa10.93□□□□□ -0.66
APP-203ENST00000354192 DNAH6Q9C0G6 4158 aa10.92□□□□□ -0.66
APP-203ENST00000354192 HECTD4Q9Y4D8 3996 aa10.92□□□□□ -0.66
APP-203ENST00000354192 PCOTHQ58A44 107 aa10.9□□□□□ -0.66
APP-203ENST00000354192 WWC2-AS2Q96NR7 200 aa10.9□□□□□ -0.66
APP-203ENST00000354192 ZNF706Q9Y5V0 76 aaPredicted RBP10.9□□□□□ -0.66
APP-203ENST00000354192 PLAC8Q9NZF1 115 aa10.9□□□□□ -0.66
APP-203ENST00000354192 DYNC2H1Q8NCM8 4307 aaKnown RBP10.9□□□□□ -0.66
APP-203ENST00000354192 DNAH11Q96DT5 4516 aa10.9□□□□□ -0.67
APP-203ENST00000354192 hDV103S1A0JD37 113 aa10.89□□□□□ -0.67
APP-203ENST00000354192 C5orf47Q569G3 176 aa10.89□□□□□ -0.67
APP-203ENST00000354192 IGLV7-43P04211 117 aa10.87□□□□□ -0.67
APP-203ENST00000354192 Q5XG85 94 aa10.87□□□□□ -0.67
APP-203ENST00000354192 RETNLBQ9BQ08 111 aa10.85□□□□□ -0.67
APP-203ENST00000354192 A0A087X002 238 aa10.85□□□□□ -0.67
APP-203ENST00000354192 NOTCH2NLQ7Z3S9 236 aa10.85□□□□□ -0.67
APP-203ENST00000354192 DNAH17Q9UFH2 4485 aa10.85□□□□□ -0.67
APP-203ENST00000354192 HYDINQ4G0P3 5121 aa10.84□□□□□ -0.67
APP-203ENST00000354192 C1orf64Q8NEQ6 169 aa10.84□□□□□ -0.67
APP-203ENST00000354192 KRTAP10-1P60331 282 aa10.83□□□□□ -0.68
APP-203ENST00000354192 FP248Q71RG6 208 aaPredicted RBP10.83□□□□□ -0.68
APP-203ENST00000354192 DNAH8Q96JB1 4490 aa10.82□□□□□ -0.68
APP-203ENST00000354192 MMP24-AS1A0A0U1RRL7 71 aa10.82□□□□□ -0.68
APP-203ENST00000354192 SMIM26A0A096LP01 95 aa10.81□□□□□ -0.68
APP-203ENST00000354192 KRTAP29-1A8MX34 341 aaPredicted RBP10.81□□□□□ -0.68
APP-203ENST00000354192 C8orf17Q9NRJ1 99 aa10.78□□□□□ -0.68
APP-203ENST00000354192 Q96NJ1 140 aa10.77□□□□□ -0.68
APP-203ENST00000354192 ATP5EP56381 51 aaPredicted RBP10.76□□□□□ -0.69
APP-203ENST00000354192 TRAV22A0A0B4J277 110 aa10.76□□□□□ -0.69
APP-203ENST00000354192 SMR3BP02814 79 aaPredicted RBP10.75□□□□□ -0.69
APP-203ENST00000354192 LINC00483Q53H64 154 aa10.75□□□□□ -0.69
APP-203ENST00000354192 A0A1B0GVX0 72 aa10.73□□□□□ -0.69
APP-203ENST00000354192 PSPHP1O15172 72 aa10.73□□□□□ -0.69
APP-203ENST00000354192 ZCCHC13Q8WW36 166 aaKnown RBP10.73□□□□□ -0.69
APP-203ENST00000354192 BRK1Q8WUW1 75 aa10.71□□□□□ -0.7
APP-203ENST00000354192 LRP1BQ9NZR2 4599 aa10.69□□□□□ -0.7
APP-203ENST00000354192 LCE6AA0A183 80 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms