RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 DNAH10Q8IVF4 4471 aa15.32■□□□□ 0.04
CPNE1-202ENST00000352393 DEFB116Q30KQ4 102 aa15.32■□□□□ 0.04
CPNE1-202ENST00000352393 NBEAL1Q6ZS30 2694 aa15.31■□□□□ 0.04
CPNE1-202ENST00000352393 hDV103S1A0JD37 113 aa15.3■□□□□ 0.04
CPNE1-202ENST00000352393 UBE2AP49459 152 aa15.3■□□□□ 0.04
CPNE1-202ENST00000352393 KRTAP11-1Q8IUC1 163 aa15.29■□□□□ 0.04
CPNE1-202ENST00000352393 MPLKIPQ8TAP9 179 aa15.28■□□□□ 0.04
CPNE1-202ENST00000352393 SPRR1BP22528 89 aa15.27■□□□□ 0.04
CPNE1-202ENST00000352393 H0Y9J4 135 aa15.26■□□□□ 0.03
CPNE1-202ENST00000352393 PHF5AQ7RTV0 110 aaKnown RBP15.26■□□□□ 0.03
CPNE1-202ENST00000352393 WFDC13Q8IUB5 93 aa15.26■□□□□ 0.03
CPNE1-202ENST00000352393 COL6A5A8TX70 2615 aa15.25■□□□□ 0.03
CPNE1-202ENST00000352393 CHTF8P0CG12 524 aa15.25■□□□□ 0.03
CPNE1-202ENST00000352393 KRTAP29-1A8MX34 341 aaPredicted RBP15.23■□□□□ 0.03
CPNE1-202ENST00000352393 C14orf177Q52M58 125 aa15.23■□□□□ 0.03
CPNE1-202ENST00000352393 DNAH9Q9NYC9 4486 aa15.23■□□□□ 0.03
CPNE1-202ENST00000352393 RPL37AP61513 92 aaKnown RBP15.22■□□□□ 0.03
CPNE1-202ENST00000352393 C1orf64Q8NEQ6 169 aa15.22■□□□□ 0.03
CPNE1-202ENST00000352393 CYP4F30PQ9H0H9 118 aa15.2■□□□□ 0.02
CPNE1-202ENST00000352393 UBE2DNLQ8IWF7 75 aa15.19■□□□□ 0.02
CPNE1-202ENST00000352393 APLNQ9ULZ1 77 aa15.18■□□□□ 0.02
CPNE1-202ENST00000352393 LYSTQ99698 3801 aa15.18■□□□□ 0.02
CPNE1-202ENST00000352393 NDUFB1O75438 58 aa15.15■□□□□ 0.02
CPNE1-202ENST00000352393 MP68P56378 58 aa15.15■□□□□ 0.02
CPNE1-202ENST00000352393 PRR15Q8IV56 129 aa15.14■□□□□ 0.01
CPNE1-202ENST00000352393 LINC00472Q9H8W2 130 aa15.14■□□□□ 0.01
CPNE1-202ENST00000352393 STAB2Q8WWQ8 2551 aa15.13■□□□□ 0.01
CPNE1-202ENST00000352393 C9orf163Q8N9P6 203 aa15.13■□□□□ 0.01
CPNE1-202ENST00000352393 TRAV22A0A0B4J277 110 aa15.12■□□□□ 0.01
CPNE1-202ENST00000352393 A8MWP4 228 aa15.11■□□□□ 0.01
CPNE1-202ENST00000352393 CASC2Q6XLA1 102 aa15.11■□□□□ 0.01
CPNE1-202ENST00000352393 BRK1Q8WUW1 75 aa15.11■□□□□ 0.01
CPNE1-202ENST00000352393 LRCOL1A6NCL2 159 aa15.09■□□□□ 0.01
CPNE1-202ENST00000352393 B9D2Q9BPU9 175 aa15.09■□□□□ 0.01
CPNE1-202ENST00000352393 DYNC2H1Q8NCM8 4307 aaKnown RBP15.08■□□□□ 0.01
CPNE1-202ENST00000352393 PRR4Q16378 134 aa15.08■□□□□ 0
CPNE1-202ENST00000352393 Q1T7F1 81 aa15.08■□□□□ 0
CPNE1-202ENST00000352393 PKIGQ9Y2B9 76 aa15.08■□□□□ 0
CPNE1-202ENST00000352393 KRTAP13-1Q8IUC0 172 aa15.07■□□□□ 0
CPNE1-202ENST00000352393 LINC00208Q96KT6 92 aa15.07■□□□□ 0
CPNE1-202ENST00000352393 SRRM2Q9UQ35 2752 aaKnown RBP15.07■□□□□ 0
CPNE1-202ENST00000352393 COL7A1Q02388 2944 aa15.06■□□□□ 0
CPNE1-202ENST00000352393 H0Y9P7 68 aa15.05■□□□□ -0
CPNE1-202ENST00000352393 H3BPC8 53 aa15.04■□□□□ -0
CPNE1-202ENST00000352393 PANO1I0J062 215 aa15.03■□□□□ -0
CPNE1-202ENST00000352393 MGAM2Q2M2H8 2515 aa15.01□□□□□ -0.01
CPNE1-202ENST00000352393 NBDYA0A0U1RRE5 68 aa14.98□□□□□ -0.01
CPNE1-202ENST00000352393 MMP24-AS1A0A0U1RRL7 71 aa14.98□□□□□ -0.01
CPNE1-202ENST00000352393 Q6ZRN7 208 aaPredicted RBP14.98□□□□□ -0.01
CPNE1-202ENST00000352393 SPANXA2-OT1Q8N9U9 137 aa14.98□□□□□ -0.01
CPNE1-202ENST00000352393 DNAH7Q8WXX0 4024 aa14.94□□□□□ -0.02
CPNE1-202ENST00000352393 Q96NJ1 140 aa14.91□□□□□ -0.02
CPNE1-202ENST00000352393 SPACA4Q8TDM5 124 aa14.9□□□□□ -0.02
CPNE1-202ENST00000352393 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.89□□□□□ -0.03
CPNE1-202ENST00000352393 CSMD3Q7Z407 3707 aa14.89□□□□□ -0.03
CPNE1-202ENST00000352393 MDFIQ99750 246 aa14.88□□□□□ -0.03
CPNE1-202ENST00000352393 PLECQ15149 4684 aaKnown RBP14.87□□□□□ -0.03
CPNE1-202ENST00000352393 LINC00483Q53H64 154 aa14.86□□□□□ -0.03
CPNE1-202ENST00000352393 TENM2Q9NT68 2774 aa14.86□□□□□ -0.03
CPNE1-202ENST00000352393 IGLV9-49A0A0B4J1Y8 123 aa14.86□□□□□ -0.03
CPNE1-202ENST00000352393 ASB16-AS1Q495Z4 193 aa14.86□□□□□ -0.03
CPNE1-202ENST00000352393 PSPHP1O15172 72 aa14.84□□□□□ -0.03
CPNE1-202ENST00000352393 NUPR2A6NF83 97 aa14.82□□□□□ -0.04
CPNE1-202ENST00000352393 V9GYY9 64 aa14.82□□□□□ -0.04
CPNE1-202ENST00000352393 MOBPQ13875 183 aa14.81□□□□□ -0.04
CPNE1-202ENST00000352393 C8orf17Q9NRJ1 99 aa14.76□□□□□ -0.05
CPNE1-202ENST00000352393 TP53AIP1Q9HCN2 124 aa14.75□□□□□ -0.05
CPNE1-202ENST00000352393 A8MUN3 132 aa14.75□□□□□ -0.05
CPNE1-202ENST00000352393 WWC2-AS2Q96NR7 200 aa14.75□□□□□ -0.05
CPNE1-202ENST00000352393 ZNF706Q9Y5V0 76 aaPredicted RBP14.75□□□□□ -0.05
CPNE1-202ENST00000352393 A0A087WTM6 91 aa14.73□□□□□ -0.05
CPNE1-202ENST00000352393 IGLV7-46A0A075B6I9 117 aa14.72□□□□□ -0.05
CPNE1-202ENST00000352393 C1orf195Q5TG92 126 aa14.72□□□□□ -0.05
CPNE1-202ENST00000352393 VPS13DQ5THJ4 4388 aa14.72□□□□□ -0.05
CPNE1-202ENST00000352393 Q8N9P0 234 aaPredicted RBP14.71□□□□□ -0.05
CPNE1-202ENST00000352393 Q6ZR54 194 aa14.71□□□□□ -0.06
CPNE1-202ENST00000352393 A0A1B0GVX0 72 aa14.7□□□□□ -0.06
CPNE1-202ENST00000352393 IGLV5-52A0A0A0MRZ9 124 aa14.69□□□□□ -0.06
CPNE1-202ENST00000352393 Q5VV11 94 aa14.69□□□□□ -0.06
CPNE1-202ENST00000352393 PSORS1C2Q9UIG4 136 aa14.69□□□□□ -0.06
CPNE1-202ENST00000352393 COA5Q86WW8 74 aa14.66□□□□□ -0.06
CPNE1-202ENST00000352393 IGHV6-1A0A0B4J1U7 121 aa14.65□□□□□ -0.06
CPNE1-202ENST00000352393 RTL8CO15255 209 aa14.65□□□□□ -0.06
CPNE1-202ENST00000352393 CD164Q04900 197 aa14.65□□□□□ -0.06
CPNE1-202ENST00000352393 LIMD2Q9BT23 127 aa14.65□□□□□ -0.06
CPNE1-202ENST00000352393 PCOTHQ58A44 107 aa14.64□□□□□ -0.07
CPNE1-202ENST00000352393 PLAC8Q9NZF1 115 aa14.63□□□□□ -0.07
CPNE1-202ENST00000352393 STARD9Q9P2P6 4700 aa14.62□□□□□ -0.07
CPNE1-202ENST00000352393 ZNF861PO60384 105 aa14.62□□□□□ -0.07
CPNE1-202ENST00000352393 DNAH8Q96JB1 4490 aa14.61□□□□□ -0.07
CPNE1-202ENST00000352393 HECTD4Q9Y4D8 3996 aa14.61□□□□□ -0.07
CPNE1-202ENST00000352393 ANAPC11Q9NYG5 84 aa14.61□□□□□ -0.07
CPNE1-202ENST00000352393 MRPL34Q9BQ48 92 aaKnown RBP14.6□□□□□ -0.07
CPNE1-202ENST00000352393 CDK2AP2O75956 126 aa14.59□□□□□ -0.07
CPNE1-202ENST00000352393 DNAH17Q9UFH2 4485 aa14.58□□□□□ -0.08
CPNE1-202ENST00000352393 NDUFS5O43920 106 aa14.57□□□□□ -0.08
CPNE1-202ENST00000352393 PRR15LQ9BU68 103 aa14.56□□□□□ -0.08
CPNE1-202ENST00000352393 DNHD1Q96M86 4753 aa14.56□□□□□ -0.08
CPNE1-202ENST00000352393 A0A087X002 238 aa14.55□□□□□ -0.08
CPNE1-202ENST00000352393 NOTCH2NLQ7Z3S9 236 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms