RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 C7orf33Q8WU49 177 aa6.86□□□□□ -1.31
CAPN3-203ENST00000349748 STAB1Q9NY15 2570 aa6.86□□□□□ -1.31
CAPN3-203ENST00000349748 IGKV2D-24A0A075B6R9 120 aa6.86□□□□□ -1.31
CAPN3-203ENST00000349748 TENM1Q9UKZ4 2725 aa6.86□□□□□ -1.31
CAPN3-203ENST00000349748 SERTAD4-AS1Q5TG53 156 aa6.85□□□□□ -1.31
CAPN3-203ENST00000349748 RPL37AP61513 92 aaKnown RBP6.84□□□□□ -1.31
CAPN3-203ENST00000349748 KRTAP10-3P60369 221 aa6.84□□□□□ -1.31
CAPN3-203ENST00000349748 CASC2Q6XLA1 102 aa6.84□□□□□ -1.31
CAPN3-203ENST00000349748 C9orf163Q8N9P6 203 aa6.84□□□□□ -1.31
CAPN3-203ENST00000349748 LINC01558Q9Y6Z2 57 aa6.84□□□□□ -1.31
CAPN3-203ENST00000349748 SPRR4Q96PI1 79 aa6.82□□□□□ -1.32
CAPN3-203ENST00000349748 PLAC8Q9NZF1 115 aa6.82□□□□□ -1.32
CAPN3-203ENST00000349748 GVQW2A0A096LPI5 108 aaPredicted RBP6.81□□□□□ -1.32
CAPN3-203ENST00000349748 TNP2Q05952 138 aa6.81□□□□□ -1.32
CAPN3-203ENST00000349748 KRTAP24-1Q3LI83 254 aa6.81□□□□□ -1.32
CAPN3-203ENST00000349748 PCOTHQ58A44 107 aa6.81□□□□□ -1.32
CAPN3-203ENST00000349748 VWFP04275 2813 aa6.81□□□□□ -1.32
CAPN3-203ENST00000349748 A0A1B0GW54 56 aa6.81□□□□□ -1.32
CAPN3-203ENST00000349748 IGLV1-51P01701 117 aa6.79□□□□□ -1.32
CAPN3-203ENST00000349748 IGLV1-50A0A075B6I6 118 aa6.78□□□□□ -1.32
CAPN3-203ENST00000349748 KRTAP29-1A8MX34 341 aaPredicted RBP6.78□□□□□ -1.32
CAPN3-203ENST00000349748 CAMK2N2Q96S95 79 aa6.78□□□□□ -1.32
CAPN3-203ENST00000349748 PRO0255Q9UI72 69 aa6.78□□□□□ -1.32
CAPN3-203ENST00000349748 IGLV7-46A0A075B6I9 117 aa6.78□□□□□ -1.32
CAPN3-203ENST00000349748 C19orf73Q9NVV2 129 aa6.78□□□□□ -1.32
CAPN3-203ENST00000349748 PLA2G1BP04054 148 aaKnown RBP6.76□□□□□ -1.33
CAPN3-203ENST00000349748 RPL37AP8A6NKH3 93 aa6.76□□□□□ -1.33
CAPN3-203ENST00000349748 H3BPC8 53 aa6.76□□□□□ -1.33
CAPN3-203ENST00000349748 CNBPP62633 177 aaKnown RBP6.75□□□□□ -1.33
CAPN3-203ENST00000349748 LINC00476Q8WZB0 136 aa6.75□□□□□ -1.33
CAPN3-203ENST00000349748 A0A087WSZ3 146 aa6.74□□□□□ -1.33
CAPN3-203ENST00000349748 TRRAPQ9Y4A5 3859 aa6.74□□□□□ -1.33
CAPN3-203ENST00000349748 DEFB4AO15263 64 aa6.74□□□□□ -1.33
CAPN3-203ENST00000349748 Q6ZRX8 168 aa6.72□□□□□ -1.33
CAPN3-203ENST00000349748 EGFEM1PQ0D2K5 195 aa6.72□□□□□ -1.33
CAPN3-203ENST00000349748 RETNLBQ9BQ08 111 aa6.72□□□□□ -1.33
CAPN3-203ENST00000349748 IGLV5-37A0A075B6J1 123 aa6.71□□□□□ -1.34
CAPN3-203ENST00000349748 HRES1P13985 223 aa6.71□□□□□ -1.34
CAPN3-203ENST00000349748 DHRS4-AS1Q9P1J3 65 aa6.71□□□□□ -1.34
CAPN3-203ENST00000349748 CSMD3Q7Z407 3707 aa6.71□□□□□ -1.34
CAPN3-203ENST00000349748 PRR34Q9NV39 138 aa6.7□□□□□ -1.34
CAPN3-203ENST00000349748 CSAG1Q6PB30 78 aa6.69□□□□□ -1.34
CAPN3-203ENST00000349748 IGFL1Q6UW32 110 aa6.69□□□□□ -1.34
CAPN3-203ENST00000349748 MGAM2Q2M2H8 2515 aa6.68□□□□□ -1.34
CAPN3-203ENST00000349748 RTL8CO15255 209 aa6.68□□□□□ -1.34
CAPN3-203ENST00000349748 NOTCH1P46531 2555 aa6.67□□□□□ -1.34
CAPN3-203ENST00000349748 PKD1L1Q8TDX9 2849 aa6.67□□□□□ -1.34
CAPN3-203ENST00000349748 HTN3P15516 51 aa6.67□□□□□ -1.34
CAPN3-203ENST00000349748 CMC4P56277 68 aaPredicted RBP6.67□□□□□ -1.34
CAPN3-203ENST00000349748 FAM168BA1KXE4 195 aa6.66□□□□□ -1.34
CAPN3-203ENST00000349748 KRTAP4-16G5E9R7 235 aaPredicted RBP6.66□□□□□ -1.34
CAPN3-203ENST00000349748 Q6ZR54 194 aa6.66□□□□□ -1.34
CAPN3-203ENST00000349748 ZNF706Q9Y5V0 76 aaPredicted RBP6.66□□□□□ -1.34
CAPN3-203ENST00000349748 X6R8D5 127 aa6.66□□□□□ -1.34
CAPN3-203ENST00000349748 C15orf56Q8N910 161 aa6.65□□□□□ -1.34
CAPN3-203ENST00000349748 SRRM2Q9UQ35 2752 aaKnown RBP6.65□□□□□ -1.35
CAPN3-203ENST00000349748 LELP1Q5T871 98 aa6.63□□□□□ -1.35
CAPN3-203ENST00000349748 H0Y9J4 135 aa6.62□□□□□ -1.35
CAPN3-203ENST00000349748 A8MWP4 228 aa6.61□□□□□ -1.35
CAPN3-203ENST00000349748 NBEAL1Q6ZS30 2694 aa6.61□□□□□ -1.35
CAPN3-203ENST00000349748 DNHD1Q96M86 4753 aa6.61□□□□□ -1.35
CAPN3-203ENST00000349748 IGKV2-24A0A0C4DH68 120 aa6.59□□□□□ -1.35
CAPN3-203ENST00000349748 MMP24-AS1A0A0U1RRL7 71 aa6.59□□□□□ -1.35
CAPN3-203ENST00000349748 SPRR1AP35321 89 aa6.59□□□□□ -1.35
CAPN3-203ENST00000349748 DEFB135Q30KP9 77 aa6.59□□□□□ -1.35
CAPN3-203ENST00000349748 KRTAP26-1Q6PEX3 210 aa6.59□□□□□ -1.35
CAPN3-203ENST00000349748 C1orf134Q5TEV5 83 aa6.59□□□□□ -1.35
CAPN3-203ENST00000349748 ASB16-AS1Q495Z4 193 aa6.57□□□□□ -1.36
CAPN3-203ENST00000349748 KRTAP10-11P60412 298 aa6.57□□□□□ -1.36
CAPN3-203ENST00000349748 KRTAP7-1Q8IUC3 87 aa6.57□□□□□ -1.36
CAPN3-203ENST00000349748 LINC00472Q9H8W2 130 aa6.56□□□□□ -1.36
CAPN3-203ENST00000349748 TENM2Q9NT68 2774 aa6.56□□□□□ -1.36
CAPN3-203ENST00000349748 PRLHP81277 87 aa6.54□□□□□ -1.36
CAPN3-203ENST00000349748 SPATA8Q6RVD6 105 aa6.54□□□□□ -1.36
CAPN3-203ENST00000349748 A0A096LNI7 61 aa6.52□□□□□ -1.37
CAPN3-203ENST00000349748 MIR22HGQ0VDD5 57 aa6.51□□□□□ -1.37
CAPN3-203ENST00000349748 A0A1B0GU69 56 aa6.51□□□□□ -1.37
CAPN3-203ENST00000349748 DEFB131BA0A096LNP1 70 aa6.5□□□□□ -1.37
CAPN3-203ENST00000349748 K7EIL1 84 aa6.5□□□□□ -1.37
CAPN3-203ENST00000349748 REG3GQ6UW15 175 aa6.5□□□□□ -1.37
CAPN3-203ENST00000349748 IGLV8-61A0A075B6I0 122 aa6.49□□□□□ -1.37
CAPN3-203ENST00000349748 ANK2Q01484 3957 aa6.49□□□□□ -1.37
CAPN3-203ENST00000349748 TENM3Q9P273 2699 aa6.49□□□□□ -1.37
CAPN3-203ENST00000349748 TP53AIP1Q9HCN2 124 aa6.48□□□□□ -1.37
CAPN3-203ENST00000349748 A0A087X002 238 aa6.48□□□□□ -1.37
CAPN3-203ENST00000349748 ROMO1P60602 79 aa6.47□□□□□ -1.37
CAPN3-203ENST00000349748 KRTAP21-3Q3LHN1 58 aa6.47□□□□□ -1.37
CAPN3-203ENST00000349748 PLA2G2DQ9UNK4 145 aa6.47□□□□□ -1.37
CAPN3-203ENST00000349748 ALMS1Q8TCU4 4167 aa6.46□□□□□ -1.37
CAPN3-203ENST00000349748 SPART-AS1P0CW21 52 aa6.45□□□□□ -1.38
CAPN3-203ENST00000349748 ZNF861PO60384 105 aa6.45□□□□□ -1.38
CAPN3-203ENST00000349748 UQCR11O14957 56 aa6.44□□□□□ -1.38
CAPN3-203ENST00000349748 C8orf17Q9NRJ1 99 aa6.43□□□□□ -1.38
CAPN3-203ENST00000349748 IGHV6-1A0A0B4J1U7 121 aa6.43□□□□□ -1.38
CAPN3-203ENST00000349748 TLX1NBP0CAT3 122 aa6.42□□□□□ -1.38
CAPN3-203ENST00000349748 ACYP2P14621 99 aa6.42□□□□□ -1.38
CAPN3-203ENST00000349748 CASC10Q5T4H9 136 aa6.42□□□□□ -1.38
CAPN3-203ENST00000349748 COL7A1Q02388 2944 aa6.41□□□□□ -1.38
CAPN3-203ENST00000349748 CMYA5Q8N3K9 4069 aa6.41□□□□□ -1.38
CAPN3-203ENST00000349748 NOTCH2NLQ7Z3S9 236 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms