RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 C11orf45Q8TAV5 145 aa11.9□□□□□ -0.51
SCARF1-202ENST00000348987 MP68P56378 58 aa11.89□□□□□ -0.51
SCARF1-202ENST00000348987 DNAH3Q8TD57 4116 aa11.89□□□□□ -0.51
SCARF1-202ENST00000348987 IGLV1-50A0A075B6I6 118 aa11.88□□□□□ -0.51
SCARF1-202ENST00000348987 CASC10Q5T4H9 136 aa11.87□□□□□ -0.51
SCARF1-202ENST00000348987 CHKB-CPT1BH3BT56 60 aa11.86□□□□□ -0.51
SCARF1-202ENST00000348987 LINC00476Q8WZB0 136 aa11.86□□□□□ -0.51
SCARF1-202ENST00000348987 LYSTQ99698 3801 aa11.86□□□□□ -0.51
SCARF1-202ENST00000348987 SPRR1AP35321 89 aa11.85□□□□□ -0.51
SCARF1-202ENST00000348987 UBE2BP63146 152 aa11.85□□□□□ -0.51
SCARF1-202ENST00000348987 Q8N9P0 234 aaPredicted RBP11.84□□□□□ -0.51
SCARF1-202ENST00000348987 CD164Q04900 197 aa11.83□□□□□ -0.52
SCARF1-202ENST00000348987 DNAH1Q9P2D7 4330 aa11.82□□□□□ -0.52
SCARF1-202ENST00000348987 RPL37AP61513 92 aaKnown RBP11.82□□□□□ -0.52
SCARF1-202ENST00000348987 C16orf90A8MZG2 172 aa11.82□□□□□ -0.52
SCARF1-202ENST00000348987 KRTAP7-1Q8IUC3 87 aa11.81□□□□□ -0.52
SCARF1-202ENST00000348987 STAB2Q8WWQ8 2551 aa11.81□□□□□ -0.52
SCARF1-202ENST00000348987 DNAH10OSP0CZ25 163 aa11.81□□□□□ -0.52
SCARF1-202ENST00000348987 PRR15LQ9BU68 103 aa11.81□□□□□ -0.52
SCARF1-202ENST00000348987 HUWE1Q7Z6Z7 4374 aaKnown RBP11.8□□□□□ -0.52
SCARF1-202ENST00000348987 UBE2AP49459 152 aa11.8□□□□□ -0.52
SCARF1-202ENST00000348987 IGFL1Q6UW32 110 aa11.8□□□□□ -0.52
SCARF1-202ENST00000348987 LINC00588Q9Y4M8 146 aa11.79□□□□□ -0.52
SCARF1-202ENST00000348987 DNAH10Q8IVF4 4471 aa11.79□□□□□ -0.52
SCARF1-202ENST00000348987 A0A087WSZ3 146 aa11.79□□□□□ -0.52
SCARF1-202ENST00000348987 SPTSSBQ8NFR3 76 aa11.79□□□□□ -0.52
SCARF1-202ENST00000348987 PLA2G2DQ9UNK4 145 aa11.79□□□□□ -0.52
SCARF1-202ENST00000348987 H0Y9P7 68 aa11.78□□□□□ -0.52
SCARF1-202ENST00000348987 COL7A1Q02388 2944 aa11.78□□□□□ -0.52
SCARF1-202ENST00000348987 LIMD2Q9BT23 127 aa11.78□□□□□ -0.52
SCARF1-202ENST00000348987 CSMD3Q7Z407 3707 aa11.77□□□□□ -0.53
SCARF1-202ENST00000348987 SPANXA2-OT1Q8N9U9 137 aa11.76□□□□□ -0.53
SCARF1-202ENST00000348987 TLX1NBP0CAT3 122 aa11.76□□□□□ -0.53
SCARF1-202ENST00000348987 KRTAP29-1A8MX34 341 aaPredicted RBP11.75□□□□□ -0.53
SCARF1-202ENST00000348987 TENM2Q9NT68 2774 aa11.75□□□□□ -0.53
SCARF1-202ENST00000348987 MRPL55Q7Z7F7 128 aaKnown RBP11.74□□□□□ -0.53
SCARF1-202ENST00000348987 IGLV5-37A0A075B6J1 123 aa11.74□□□□□ -0.53
SCARF1-202ENST00000348987 LCA10Q71F78 164 aa11.73□□□□□ -0.53
SCARF1-202ENST00000348987 KTN1-AS1Q86SY8 53 aa11.73□□□□□ -0.53
SCARF1-202ENST00000348987 CASC2Q6XLA1 102 aa11.72□□□□□ -0.53
SCARF1-202ENST00000348987 K7EIL1 84 aa11.71□□□□□ -0.53
SCARF1-202ENST00000348987 SRRM2Q9UQ35 2752 aaKnown RBP11.7□□□□□ -0.54
SCARF1-202ENST00000348987 REG3GQ6UW15 175 aa11.7□□□□□ -0.54
SCARF1-202ENST00000348987 A6NED7 52 aa11.69□□□□□ -0.54
SCARF1-202ENST00000348987 CNBPP62633 177 aaKnown RBP11.67□□□□□ -0.54
SCARF1-202ENST00000348987 C9orf163Q8N9P6 203 aa11.67□□□□□ -0.54
SCARF1-202ENST00000348987 RBM12B-AS1Q9P1G2 102 aa11.67□□□□□ -0.54
SCARF1-202ENST00000348987 H3BPC8 53 aa11.67□□□□□ -0.54
SCARF1-202ENST00000348987 PRLHP81277 87 aa11.66□□□□□ -0.54
SCARF1-202ENST00000348987 ATP11AUNQ6ZP68 121 aa11.66□□□□□ -0.54
SCARF1-202ENST00000348987 Q75L30 129 aa11.66□□□□□ -0.54
SCARF1-202ENST00000348987 COA5Q86WW8 74 aa11.65□□□□□ -0.54
SCARF1-202ENST00000348987 DNAH9Q9NYC9 4486 aa11.65□□□□□ -0.54
SCARF1-202ENST00000348987 LOC101927531A0A1B0GV80 90 aa11.61□□□□□ -0.55
SCARF1-202ENST00000348987 IGLV8-61A0A075B6I0 122 aa11.6□□□□□ -0.55
SCARF1-202ENST00000348987 KRTAP1-5Q9BYS1 174 aa11.59□□□□□ -0.55
SCARF1-202ENST00000348987 A6NN06 94 aa11.59□□□□□ -0.55
SCARF1-202ENST00000348987 A8MWP4 228 aa11.58□□□□□ -0.56
SCARF1-202ENST00000348987 DNAH7Q8WXX0 4024 aa11.57□□□□□ -0.56
SCARF1-202ENST00000348987 IGLV7-46A0A075B6I9 117 aa11.56□□□□□ -0.56
SCARF1-202ENST00000348987 PCOTHQ58A44 107 aa11.56□□□□□ -0.56
SCARF1-202ENST00000348987 IGKV2-24A0A0C4DH68 120 aa11.56□□□□□ -0.56
SCARF1-202ENST00000348987 LINC00472Q9H8W2 130 aa11.55□□□□□ -0.56
SCARF1-202ENST00000348987 CDC42SE1Q9NRR8 79 aa11.55□□□□□ -0.56
SCARF1-202ENST00000348987 SPAG11AQ6PDA7 123 aa11.55□□□□□ -0.56
SCARF1-202ENST00000348987 NDUFS5O43920 106 aa11.54□□□□□ -0.56
SCARF1-202ENST00000348987 H0Y9J4 135 aa11.54□□□□□ -0.56
SCARF1-202ENST00000348987 PHF5AQ7RTV0 110 aaKnown RBP11.54□□□□□ -0.56
SCARF1-202ENST00000348987 MDFIQ99750 246 aa11.54□□□□□ -0.56
SCARF1-202ENST00000348987 A0A096LNI7 61 aa11.53□□□□□ -0.56
SCARF1-202ENST00000348987 MMP24-AS1A0A0U1RRL7 71 aa11.49□□□□□ -0.57
SCARF1-202ENST00000348987 MOBPQ13875 183 aa11.48□□□□□ -0.57
SCARF1-202ENST00000348987 LINC01558Q9Y6Z2 57 aa11.46□□□□□ -0.57
SCARF1-202ENST00000348987 KRTAP11-1Q8IUC1 163 aa11.45□□□□□ -0.58
SCARF1-202ENST00000348987 CHTF8P0CG12 524 aa11.45□□□□□ -0.58
SCARF1-202ENST00000348987 SPINK7P58062 85 aa11.44□□□□□ -0.58
SCARF1-202ENST00000348987 PLECQ15149 4684 aaKnown RBP11.44□□□□□ -0.58
SCARF1-202ENST00000348987 C7orf65Q6ZTY9 151 aa11.43□□□□□ -0.58
SCARF1-202ENST00000348987 PLAC8Q9NZF1 115 aa11.43□□□□□ -0.58
SCARF1-202ENST00000348987 HRES1P13985 223 aa11.37□□□□□ -0.59
SCARF1-202ENST00000348987 SPRR1BP22528 89 aa11.37□□□□□ -0.59
SCARF1-202ENST00000348987 UBE2DNLQ8IWF7 75 aa11.37□□□□□ -0.59
SCARF1-202ENST00000348987 PRKDCP78527 4128 aaKnown RBP11.35□□□□□ -0.59
SCARF1-202ENST00000348987 TP53AIP1Q9HCN2 124 aa11.34□□□□□ -0.59
SCARF1-202ENST00000348987 APLNQ9ULZ1 77 aa11.33□□□□□ -0.6
SCARF1-202ENST00000348987 Q6ZR54 194 aa11.32□□□□□ -0.6
SCARF1-202ENST00000348987 ASB16-AS1Q495Z4 193 aa11.31□□□□□ -0.6
SCARF1-202ENST00000348987 STARD9Q9P2P6 4700 aa11.31□□□□□ -0.6
SCARF1-202ENST00000348987 DYNC2H1Q8NCM8 4307 aaKnown RBP11.31□□□□□ -0.6
SCARF1-202ENST00000348987 PANO1I0J062 215 aa11.3□□□□□ -0.6
SCARF1-202ENST00000348987 Q96NJ1 140 aa11.3□□□□□ -0.6
SCARF1-202ENST00000348987 DNHD1Q96M86 4753 aa11.29□□□□□ -0.6
SCARF1-202ENST00000348987 C8orf17Q9NRJ1 99 aa11.28□□□□□ -0.6
SCARF1-202ENST00000348987 MEGF8Q7Z7M0 2845 aa11.27□□□□□ -0.61
SCARF1-202ENST00000348987 IGHV6-1A0A0B4J1U7 121 aa11.25□□□□□ -0.61
SCARF1-202ENST00000348987 PRR26Q8N8Z3 221 aa11.25□□□□□ -0.61
SCARF1-202ENST00000348987 IGLV9-49A0A0B4J1Y8 123 aa11.23□□□□□ -0.61
SCARF1-202ENST00000348987 LINC00313P59037 77 aa11.22□□□□□ -0.61
SCARF1-202ENST00000348987 PRAC1Q96KF2 57 aa11.21□□□□□ -0.62
SCARF1-202ENST00000348987 TGP01266 2768 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms