RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 LINC00208Q96KT6 92 aa13.67□□□□□ -0.22
TRIM3-201ENST00000345851 IGLV1-50A0A075B6I6 118 aa13.66□□□□□ -0.22
TRIM3-201ENST00000345851 STAB2Q8WWQ8 2551 aa13.65□□□□□ -0.22
TRIM3-201ENST00000345851 DEFB131BA0A096LNP1 70 aa13.65□□□□□ -0.22
TRIM3-201ENST00000345851 LINC00476Q8WZB0 136 aa13.65□□□□□ -0.22
TRIM3-201ENST00000345851 LYSTQ99698 3801 aa13.64□□□□□ -0.23
TRIM3-201ENST00000345851 MP68P56378 58 aa13.63□□□□□ -0.23
TRIM3-201ENST00000345851 NDUFB1O75438 58 aa13.62□□□□□ -0.23
TRIM3-201ENST00000345851 B9D2Q9BPU9 175 aa13.62□□□□□ -0.23
TRIM3-201ENST00000345851 RPL37AP61513 92 aaKnown RBP13.62□□□□□ -0.23
TRIM3-201ENST00000345851 SPRR1AP35321 89 aa13.61□□□□□ -0.23
TRIM3-201ENST00000345851 Q5VV11 94 aa13.61□□□□□ -0.23
TRIM3-201ENST00000345851 KRTAP7-1Q8IUC3 87 aa13.6□□□□□ -0.23
TRIM3-201ENST00000345851 A0A087WSZ3 146 aa13.58□□□□□ -0.24
TRIM3-201ENST00000345851 IGFL1Q6UW32 110 aa13.57□□□□□ -0.24
TRIM3-201ENST00000345851 CHKB-CPT1BH3BT56 60 aa13.56□□□□□ -0.24
TRIM3-201ENST00000345851 CASC10Q5T4H9 136 aa13.55□□□□□ -0.24
TRIM3-201ENST00000345851 MRPL55Q7Z7F7 128 aaKnown RBP13.54□□□□□ -0.24
TRIM3-201ENST00000345851 LINC01556Q5JQF7 62 aa13.54□□□□□ -0.24
TRIM3-201ENST00000345851 H0Y9P7 68 aa13.53□□□□□ -0.24
TRIM3-201ENST00000345851 PLA2G2DQ9UNK4 145 aa13.53□□□□□ -0.24
TRIM3-201ENST00000345851 PRR15LQ9BU68 103 aa13.52□□□□□ -0.25
TRIM3-201ENST00000345851 TENM2Q9NT68 2774 aa13.51□□□□□ -0.25
TRIM3-201ENST00000345851 TLX1NBP0CAT3 122 aa13.51□□□□□ -0.25
TRIM3-201ENST00000345851 Q8N9P0 234 aaPredicted RBP13.51□□□□□ -0.25
TRIM3-201ENST00000345851 H3BNG1 76 aa13.5□□□□□ -0.25
TRIM3-201ENST00000345851 DNAH9Q9NYC9 4486 aa13.5□□□□□ -0.25
TRIM3-201ENST00000345851 SPTSSBQ8NFR3 76 aa13.49□□□□□ -0.25
TRIM3-201ENST00000345851 IGLV5-37A0A075B6J1 123 aa13.48□□□□□ -0.25
TRIM3-201ENST00000345851 PRLHP81277 87 aa13.48□□□□□ -0.25
TRIM3-201ENST00000345851 REG3GQ6UW15 175 aa13.48□□□□□ -0.25
TRIM3-201ENST00000345851 C16orf90A8MZG2 172 aa13.46□□□□□ -0.25
TRIM3-201ENST00000345851 CASC2Q6XLA1 102 aa13.46□□□□□ -0.25
TRIM3-201ENST00000345851 UBE2AP49459 152 aa13.46□□□□□ -0.26
TRIM3-201ENST00000345851 KRTAP29-1A8MX34 341 aaPredicted RBP13.45□□□□□ -0.26
TRIM3-201ENST00000345851 DNHD1Q96M86 4753 aa13.44□□□□□ -0.26
TRIM3-201ENST00000345851 SRRM2Q9UQ35 2752 aaKnown RBP13.43□□□□□ -0.26
TRIM3-201ENST00000345851 LIMD2Q9BT23 127 aa13.42□□□□□ -0.26
TRIM3-201ENST00000345851 LINC00588Q9Y4M8 146 aa13.42□□□□□ -0.26
TRIM3-201ENST00000345851 CSMD3Q7Z407 3707 aa13.41□□□□□ -0.26
TRIM3-201ENST00000345851 SPANXA2-OT1Q8N9U9 137 aa13.41□□□□□ -0.26
TRIM3-201ENST00000345851 CD164Q04900 197 aa13.4□□□□□ -0.26
TRIM3-201ENST00000345851 CNBPP62633 177 aaKnown RBP13.39□□□□□ -0.27
TRIM3-201ENST00000345851 DNAH10Q8IVF4 4471 aa13.39□□□□□ -0.27
TRIM3-201ENST00000345851 DNAH7Q8WXX0 4024 aa13.37□□□□□ -0.27
TRIM3-201ENST00000345851 A6NED7 52 aa13.37□□□□□ -0.27
TRIM3-201ENST00000345851 DNAH10OSP0CZ25 163 aa13.36□□□□□ -0.27
TRIM3-201ENST00000345851 LCA10Q71F78 164 aa13.36□□□□□ -0.27
TRIM3-201ENST00000345851 IGKV2-24A0A0C4DH68 120 aa13.35□□□□□ -0.27
TRIM3-201ENST00000345851 PRKDCP78527 4128 aaKnown RBP13.35□□□□□ -0.27
TRIM3-201ENST00000345851 COA5Q86WW8 74 aa13.34□□□□□ -0.27
TRIM3-201ENST00000345851 C9orf163Q8N9P6 203 aa13.33□□□□□ -0.28
TRIM3-201ENST00000345851 H3BPC8 53 aa13.32□□□□□ -0.28
TRIM3-201ENST00000345851 A0A096LNI7 61 aa13.32□□□□□ -0.28
TRIM3-201ENST00000345851 KTN1-AS1Q86SY8 53 aa13.32□□□□□ -0.28
TRIM3-201ENST00000345851 PCOTHQ58A44 107 aa13.31□□□□□ -0.28
TRIM3-201ENST00000345851 DNAH1Q9P2D7 4330 aa13.3□□□□□ -0.28
TRIM3-201ENST00000345851 H0Y9J4 135 aa13.3□□□□□ -0.28
TRIM3-201ENST00000345851 IGLV8-61A0A075B6I0 122 aa13.29□□□□□ -0.28
TRIM3-201ENST00000345851 A8MWP4 228 aa13.29□□□□□ -0.28
TRIM3-201ENST00000345851 PLECQ15149 4684 aaKnown RBP13.28□□□□□ -0.28
TRIM3-201ENST00000345851 Q75L30 129 aa13.27□□□□□ -0.28
TRIM3-201ENST00000345851 RBM12B-AS1Q9P1G2 102 aa13.26□□□□□ -0.29
TRIM3-201ENST00000345851 LINC00472Q9H8W2 130 aa13.25□□□□□ -0.29
TRIM3-201ENST00000345851 ATP11AUNQ6ZP68 121 aa13.24□□□□□ -0.29
TRIM3-201ENST00000345851 SPAG11AQ6PDA7 123 aa13.23□□□□□ -0.29
TRIM3-201ENST00000345851 MEGF8Q7Z7M0 2845 aa13.23□□□□□ -0.29
TRIM3-201ENST00000345851 LOC101927531A0A1B0GV80 90 aa13.22□□□□□ -0.29
TRIM3-201ENST00000345851 IGLV7-46A0A075B6I9 117 aa13.21□□□□□ -0.3
TRIM3-201ENST00000345851 KRTAP1-5Q9BYS1 174 aa13.21□□□□□ -0.3
TRIM3-201ENST00000345851 MMP24-AS1A0A0U1RRL7 71 aa13.19□□□□□ -0.3
TRIM3-201ENST00000345851 STARD9Q9P2P6 4700 aa13.19□□□□□ -0.3
TRIM3-201ENST00000345851 KRTAP11-1Q8IUC1 163 aa13.18□□□□□ -0.3
TRIM3-201ENST00000345851 A6NN06 94 aa13.17□□□□□ -0.3
TRIM3-201ENST00000345851 UBE2DNLQ8IWF7 75 aa13.15□□□□□ -0.3
TRIM3-201ENST00000345851 CDC42SE1Q9NRR8 79 aa13.15□□□□□ -0.3
TRIM3-201ENST00000345851 PHF5AQ7RTV0 110 aaKnown RBP13.14□□□□□ -0.31
TRIM3-201ENST00000345851 CHTF8P0CG12 524 aa13.13□□□□□ -0.31
TRIM3-201ENST00000345851 APLNQ9ULZ1 77 aa13.11□□□□□ -0.31
TRIM3-201ENST00000345851 NDUFS5O43920 106 aa13.1□□□□□ -0.31
TRIM3-201ENST00000345851 TGP01266 2768 aa13.09□□□□□ -0.31
TRIM3-201ENST00000345851 MOBPQ13875 183 aa13.09□□□□□ -0.31
TRIM3-201ENST00000345851 SPINK7P58062 85 aa13.08□□□□□ -0.32
TRIM3-201ENST00000345851 LINC01558Q9Y6Z2 57 aa13.07□□□□□ -0.32
TRIM3-201ENST00000345851 DYNC2H1Q8NCM8 4307 aaKnown RBP13.07□□□□□ -0.32
TRIM3-201ENST00000345851 SPRR1BP22528 89 aa13.04□□□□□ -0.32
TRIM3-201ENST00000345851 KMT2AQ03164 3969 aa13.03□□□□□ -0.32
TRIM3-201ENST00000345851 HRES1P13985 223 aa13.02□□□□□ -0.33
TRIM3-201ENST00000345851 C7orf65Q6ZTY9 151 aa13.01□□□□□ -0.33
TRIM3-201ENST00000345851 IGLV9-49A0A0B4J1Y8 123 aa13□□□□□ -0.33
TRIM3-201ENST00000345851 PLAC8Q9NZF1 115 aa13□□□□□ -0.33
TRIM3-201ENST00000345851 IGHV6-1A0A0B4J1U7 121 aa12.98□□□□□ -0.33
TRIM3-201ENST00000345851 TP53AIP1Q9HCN2 124 aa12.98□□□□□ -0.33
TRIM3-201ENST00000345851 Q96NJ1 140 aa12.97□□□□□ -0.33
TRIM3-201ENST00000345851 C8orf17Q9NRJ1 99 aa12.97□□□□□ -0.33
TRIM3-201ENST00000345851 FBN3Q75N90 2809 aa12.96□□□□□ -0.33
TRIM3-201ENST00000345851 Q6ZR54 194 aa12.94□□□□□ -0.34
TRIM3-201ENST00000345851 ASB16-AS1Q495Z4 193 aa12.92□□□□□ -0.34
TRIM3-201ENST00000345851 NUPR2A6NF83 97 aa12.91□□□□□ -0.34
TRIM3-201ENST00000345851 PRR26Q8N8Z3 221 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms