RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 C1orf137Q5JT78 98 aa15.54■□□□□ 0.08
TRADD-201ENST00000345057 LINC00336Q6ZUF6 198 aa15.54■□□□□ 0.08
TRADD-201ENST00000345057 DNAH11Q96DT5 4516 aa15.51■□□□□ 0.07
TRADD-201ENST00000345057 Q6ZSA8 131 aa15.51■□□□□ 0.07
TRADD-201ENST00000345057 ZNF706Q9Y5V0 76 aaPredicted RBP15.5■□□□□ 0.07
TRADD-201ENST00000345057 IGLV8-61A0A075B6I0 122 aa15.49■□□□□ 0.07
TRADD-201ENST00000345057 CIRBP-AS1Q8TBR5 109 aa15.49■□□□□ 0.07
TRADD-201ENST00000345057 FAT2Q9NYQ8 4349 aa15.49■□□□□ 0.07
TRADD-201ENST00000345057 FAM30AQ9NZY2 134 aa15.47■□□□□ 0.07
TRADD-201ENST00000345057 DNAH5Q8TE73 4624 aa15.47■□□□□ 0.07
TRADD-201ENST00000345057 ZNF861PO60384 105 aa15.46■□□□□ 0.07
TRADD-201ENST00000345057 Q6ZVQ6 151 aa15.46■□□□□ 0.07
TRADD-201ENST00000345057 KRTAP10-1P60331 282 aa15.46■□□□□ 0.06
TRADD-201ENST00000345057 Q8NBF4 154 aa15.46■□□□□ 0.06
TRADD-201ENST00000345057 SCXQ7RTU7 201 aa15.44■□□□□ 0.06
TRADD-201ENST00000345057 IGKV3D-7A0A0C4DH55 119 aa15.43■□□□□ 0.06
TRADD-201ENST00000345057 DNAH8Q96JB1 4490 aa15.43■□□□□ 0.06
TRADD-201ENST00000345057 A0A1W2PNM2 257 aa15.41■□□□□ 0.06
TRADD-201ENST00000345057 SPRR4Q96PI1 79 aa15.41■□□□□ 0.06
TRADD-201ENST00000345057 PKD1P98161 4303 aa15.39■□□□□ 0.05
TRADD-201ENST00000345057 IGLV7-43P04211 117 aa15.39■□□□□ 0.05
TRADD-201ENST00000345057 LINC00483Q53H64 154 aa15.38■□□□□ 0.05
TRADD-201ENST00000345057 IGFL1Q6UW32 110 aa15.38■□□□□ 0.05
TRADD-201ENST00000345057 CXCL6P80162 114 aa15.37■□□□□ 0.05
TRADD-201ENST00000345057 NREPQ16612 68 aa15.37■□□□□ 0.05
TRADD-201ENST00000345057 HAMPP81172 84 aa15.37■□□□□ 0.05
TRADD-201ENST00000345057 CRYGAP11844 174 aa15.36■□□□□ 0.05
TRADD-201ENST00000345057 RPL37AP61513 92 aaKnown RBP15.31■□□□□ 0.04
TRADD-201ENST00000345057 HIST1H4AP62805 103 aaKnown RBP15.3■□□□□ 0.04
TRADD-201ENST00000345057 FAM236AA0A1B0GUQ0 79 aa15.29■□□□□ 0.04
TRADD-201ENST00000345057 FAM236BA0A1B0GV22 79 aa15.29■□□□□ 0.04
TRADD-201ENST00000345057 ANAPC13Q9BS18 74 aa15.26■□□□□ 0.03
TRADD-201ENST00000345057 C9orf153Q5TBE3 101 aa15.23■□□□□ 0.03
TRADD-201ENST00000345057 A0A1B0GVY2 172 aa15.23■□□□□ 0.03
TRADD-201ENST00000345057 BPY2O14599 106 aa15.23■□□□□ 0.03
TRADD-201ENST00000345057 SRRM2Q9UQ35 2752 aaKnown RBP15.22■□□□□ 0.03
TRADD-201ENST00000345057 IGLV9-49A0A0B4J1Y8 123 aa15.21■□□□□ 0.03
TRADD-201ENST00000345057 A0A087WVE0 104 aa15.19■□□□□ 0.02
TRADD-201ENST00000345057 A0A0G2JQZ4 141 aa15.19■□□□□ 0.02
TRADD-201ENST00000345057 A0A087WSZ3 146 aa15.17■□□□□ 0.02
TRADD-201ENST00000345057 ATOX1O00244 68 aa15.16■□□□□ 0.02
TRADD-201ENST00000345057 MOBPQ13875 183 aa15.12■□□□□ 0.01
TRADD-201ENST00000345057 ANAPC11Q9NYG5 84 aa15.08■□□□□ 0.01
TRADD-201ENST00000345057 LRP1BQ9NZR2 4599 aa15.08■□□□□ 0
TRADD-201ENST00000345057 PKHD1P08F94 4074 aa15.04■□□□□ -0
TRADD-201ENST00000345057 EPPK1P58107 5090 aaKnown RBP15.04■□□□□ -0
TRADD-201ENST00000345057 IGKV4-1P06312 121 aa15.04■□□□□ -0
TRADD-201ENST00000345057 SS18L2Q9UHA2 77 aa15.04■□□□□ -0
TRADD-201ENST00000345057 FAM229BQ4G0N7 80 aa15.03■□□□□ -0
TRADD-201ENST00000345057 SSBP3-AS1Q7Z2R9 100 aa15.03■□□□□ -0
TRADD-201ENST00000345057 Q8N9L7 120 aa14.99□□□□□ -0.01
TRADD-201ENST00000345057 DSCR10P59022 87 aa14.99□□□□□ -0.01
TRADD-201ENST00000345057 CD164Q04900 197 aa14.97□□□□□ -0.01
TRADD-201ENST00000345057 J3KT08 172 aa14.96□□□□□ -0.01
TRADD-201ENST00000345057 SMIM20Q8N5G0 67 aa14.96□□□□□ -0.01
TRADD-201ENST00000345057 LINC00472Q9H8W2 130 aa14.96□□□□□ -0.01
TRADD-201ENST00000345057 DYNC1H1Q14204 4646 aaKnown RBP14.96□□□□□ -0.02
TRADD-201ENST00000345057 SPINK6Q6UWN8 80 aa14.95□□□□□ -0.02
TRADD-201ENST00000345057 HRCT1Q6UXD1 115 aa14.93□□□□□ -0.02
TRADD-201ENST00000345057 SERP2Q8N6R1 65 aa14.93□□□□□ -0.02
TRADD-201ENST00000345057 K7EQZ3 153 aa14.91□□□□□ -0.02
TRADD-201ENST00000345057 UQCRQO14949 82 aa14.91□□□□□ -0.02
TRADD-201ENST00000345057 COX7CP15954 63 aa14.91□□□□□ -0.02
TRADD-201ENST00000345057 DEFB116Q30KQ4 102 aa14.9□□□□□ -0.02
TRADD-201ENST00000345057 VPS13BQ7Z7G8 4022 aa14.9□□□□□ -0.02
TRADD-201ENST00000345057 KRTAP1-4P0C5Y4 121 aa14.89□□□□□ -0.03
TRADD-201ENST00000345057 A0A087X002 238 aa14.86□□□□□ -0.03
TRADD-201ENST00000345057 A8MWP4 228 aa14.86□□□□□ -0.03
TRADD-201ENST00000345057 CCDC179H3BU77 68 aa14.85□□□□□ -0.03
TRADD-201ENST00000345057 SMR3BP02814 79 aaPredicted RBP14.85□□□□□ -0.03
TRADD-201ENST00000345057 TRAV7A0A075B6U4 112 aa14.84□□□□□ -0.03
TRADD-201ENST00000345057 PLA2G1BP04054 148 aaKnown RBP14.83□□□□□ -0.04
TRADD-201ENST00000345057 KRTAP13-2Q52LG2 175 aa14.83□□□□□ -0.04
TRADD-201ENST00000345057 NDUFB1O75438 58 aa14.82□□□□□ -0.04
TRADD-201ENST00000345057 PRR15Q8IV56 129 aa14.82□□□□□ -0.04
TRADD-201ENST00000345057 HCG22E2RYF7 251 aa14.81□□□□□ -0.04
TRADD-201ENST00000345057 Q96NJ1 140 aa14.81□□□□□ -0.04
TRADD-201ENST00000345057 APOBP04114 4563 aaKnown RBP14.81□□□□□ -0.04
TRADD-201ENST00000345057 BIRC6Q9NR09 4857 aa14.8□□□□□ -0.04
TRADD-201ENST00000345057 ASB16-AS1Q495Z4 193 aa14.76□□□□□ -0.05
TRADD-201ENST00000345057 CDK2AP2O75956 126 aa14.74□□□□□ -0.05
TRADD-201ENST00000345057 Q5XG85 94 aa14.73□□□□□ -0.05
TRADD-201ENST00000345057 TYMSOSQ8TAI1 123 aa14.73□□□□□ -0.05
TRADD-201ENST00000345057 KRTAP10-4P60372 401 aaPredicted RBP14.71□□□□□ -0.05
TRADD-201ENST00000345057 C4orf48Q5BLP8 95 aa14.69□□□□□ -0.06
TRADD-201ENST00000345057 LIMD2Q9BT23 127 aa14.69□□□□□ -0.06
TRADD-201ENST00000345057 OCR1Q9BZK8 76 aa14.69□□□□□ -0.06
TRADD-201ENST00000345057 FAM229AH3BQW9 127 aa14.67□□□□□ -0.06
TRADD-201ENST00000345057 CASC2Q6XLA1 102 aa14.65□□□□□ -0.06
TRADD-201ENST00000345057 SVIPQ8NHG7 77 aa14.65□□□□□ -0.06
TRADD-201ENST00000345057 WFDC13Q8IUB5 93 aa14.65□□□□□ -0.06
TRADD-201ENST00000345057 A0A1B0GVX0 72 aa14.63□□□□□ -0.07
TRADD-201ENST00000345057 KRTAP29-1A8MX34 341 aaPredicted RBP14.63□□□□□ -0.07
TRADD-201ENST00000345057 SPINK1P00995 79 aa14.63□□□□□ -0.07
TRADD-201ENST00000345057 MMP24-AS1A0A0U1RRL7 71 aa14.59□□□□□ -0.07
TRADD-201ENST00000345057 SPAG11AQ6PDA7 123 aa14.59□□□□□ -0.07
TRADD-201ENST00000345057 PRR26Q8N8Z3 221 aa14.59□□□□□ -0.07
TRADD-201ENST00000345057 C20orf197Q8N268 126 aa14.59□□□□□ -0.07
TRADD-201ENST00000345057 FAT1Q14517 4588 aa14.58□□□□□ -0.08
TRADD-201ENST00000345057 C8orf17Q9NRJ1 99 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms