RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 LCE2BO14633 110 aa4.8□□□□□ -1.64
ZNF540-202ENST00000343599 TGP01266 2768 aa4.8□□□□□ -1.64
ZNF540-202ENST00000343599 WNK2Q9Y3S1 2297 aa4.79□□□□□ -1.64
ZNF540-202ENST00000343599 LOC100131303A0A0U1RQF7 123 aa4.79□□□□□ -1.64
ZNF540-202ENST00000343599 TRBV6-8A0A0A6YYG3 113 aa4.79□□□□□ -1.64
ZNF540-202ENST00000343599 K7EQD1 137 aa4.79□□□□□ -1.64
ZNF540-202ENST00000343599 Q6ZSN1 163 aa4.79□□□□□ -1.64
ZNF540-202ENST00000343599 PRO0255Q9UI72 69 aa4.79□□□□□ -1.64
ZNF540-202ENST00000343599 CELA1Q9UNI1 258 aa4.79□□□□□ -1.64
ZNF540-202ENST00000343599 TENM3Q9P273 2699 aa4.79□□□□□ -1.64
ZNF540-202ENST00000343599 ZCCHC13Q8WW36 166 aaKnown RBP4.78□□□□□ -1.64
ZNF540-202ENST00000343599 IGKV4-1P06312 121 aa4.77□□□□□ -1.65
ZNF540-202ENST00000343599 COX7B2Q8TF08 81 aa4.77□□□□□ -1.65
ZNF540-202ENST00000343599 HCG22E2RYF7 251 aa4.77□□□□□ -1.65
ZNF540-202ENST00000343599 H3BQ85 93 aa4.77□□□□□ -1.65
ZNF540-202ENST00000343599 Q5VSD8 79 aa4.77□□□□□ -1.65
ZNF540-202ENST00000343599 LINC00158P58513 81 aa4.76□□□□□ -1.65
ZNF540-202ENST00000343599 DNAH5Q8TE73 4624 aa4.76□□□□□ -1.65
ZNF540-202ENST00000343599 LELP1Q5T871 98 aa4.76□□□□□ -1.65
ZNF540-202ENST00000343599 WFDC10AQ9H1F0 79 aa4.76□□□□□ -1.65
ZNF540-202ENST00000343599 ABCA13Q86UQ4 5058 aa4.76□□□□□ -1.65
ZNF540-202ENST00000343599 CNBPP62633 177 aaKnown RBP4.76□□□□□ -1.65
ZNF540-202ENST00000343599 PRAC1Q96KF2 57 aa4.76□□□□□ -1.65
ZNF540-202ENST00000343599 LIMD2Q9BT23 127 aa4.76□□□□□ -1.65
ZNF540-202ENST00000343599 A0A096LPF7 62 aa4.75□□□□□ -1.65
ZNF540-202ENST00000343599 CHKB-CPT1BH3BT56 60 aa4.75□□□□□ -1.65
ZNF540-202ENST00000343599 LINC00575Q6W349 94 aa4.75□□□□□ -1.65
ZNF540-202ENST00000343599 SCXQ7RTU7 201 aa4.75□□□□□ -1.65
ZNF540-202ENST00000343599 SPTSSBQ8NFR3 76 aa4.74□□□□□ -1.65
ZNF540-202ENST00000343599 IGHV3-73A0A0B4J1V6 119 aa4.74□□□□□ -1.65
ZNF540-202ENST00000343599 CDC42SE2Q9NRR3 84 aa4.74□□□□□ -1.65
ZNF540-202ENST00000343599 Q8N9P0 234 aaPredicted RBP4.73□□□□□ -1.65
ZNF540-202ENST00000343599 IGHV3-53P01767 116 aa4.73□□□□□ -1.65
ZNF540-202ENST00000343599 NKAPP1Q8N9T2 125 aa4.72□□□□□ -1.65
ZNF540-202ENST00000343599 CDC42SE1Q9NRR8 79 aa4.72□□□□□ -1.65
ZNF540-202ENST00000343599 LOC101927531A0A1B0GV80 90 aa4.71□□□□□ -1.65
ZNF540-202ENST00000343599 ELOF1P60002 83 aaKnown RBP4.71□□□□□ -1.65
ZNF540-202ENST00000343599 IGLV4-60A0A075B6I1 120 aa4.71□□□□□ -1.66
ZNF540-202ENST00000343599 SORL1Q92673 2214 aa4.7□□□□□ -1.66
ZNF540-202ENST00000343599 MUC17Q685J3 4493 aa4.7□□□□□ -1.66
ZNF540-202ENST00000343599 Q8N9L7 120 aa4.69□□□□□ -1.66
ZNF540-202ENST00000343599 KRTAP4-5Q9BYR2 181 aa4.69□□□□□ -1.66
ZNF540-202ENST00000343599 MOBPQ13875 183 aa4.69□□□□□ -1.66
ZNF540-202ENST00000343599 CHCHD10Q8WYQ3 142 aaPredicted RBP4.69□□□□□ -1.66
ZNF540-202ENST00000343599 NDUFB1O75438 58 aa4.69□□□□□ -1.66
ZNF540-202ENST00000343599 C6orf99Q4VX62 202 aa4.69□□□□□ -1.66
ZNF540-202ENST00000343599 Q9BRP9 147 aa4.69□□□□□ -1.66
ZNF540-202ENST00000343599 PRR15LQ9BU68 103 aa4.69□□□□□ -1.66
ZNF540-202ENST00000343599 COX7BP24311 80 aa4.68□□□□□ -1.66
ZNF540-202ENST00000343599 TOMM7Q9P0U1 55 aa4.68□□□□□ -1.66
ZNF540-202ENST00000343599 TENM2Q9NT68 2774 aa4.68□□□□□ -1.66
ZNF540-202ENST00000343599 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.67□□□□□ -1.66
ZNF540-202ENST00000343599 IGHV3OR16-9A0A0B4J2B5 98 aa4.67□□□□□ -1.66
ZNF540-202ENST00000343599 SPINK13Q1W4C9 94 aa4.67□□□□□ -1.66
ZNF540-202ENST00000343599 SMIM29Q86T20 159 aa4.67□□□□□ -1.66
ZNF540-202ENST00000343599 A6NED7 52 aa4.67□□□□□ -1.66
ZNF540-202ENST00000343599 LINC01554Q52M75 96 aa4.67□□□□□ -1.66
ZNF540-202ENST00000343599 SPINK6Q6UWN8 80 aa4.67□□□□□ -1.66
ZNF540-202ENST00000343599 PLAC8Q9NZF1 115 aa4.67□□□□□ -1.66
ZNF540-202ENST00000343599 IGKV3-7A0A075B6H7 116 aa4.66□□□□□ -1.66
ZNF540-202ENST00000343599 TRGV2A0A075B6R0 118 aa4.66□□□□□ -1.66
ZNF540-202ENST00000343599 KRTAP10-1P60331 282 aa4.66□□□□□ -1.66
ZNF540-202ENST00000343599 PRR3P79522 188 aaKnown RBP4.66□□□□□ -1.66
ZNF540-202ENST00000343599 KIAA0087Q14695 138 aa4.66□□□□□ -1.66
ZNF540-202ENST00000343599 C9orf116Q5BN46 136 aaPredicted RBP4.66□□□□□ -1.66
ZNF540-202ENST00000343599 ETDCA0A1B0GVM5 59 aa4.65□□□□□ -1.66
ZNF540-202ENST00000343599 KRTAP10-2P60368 255 aa4.65□□□□□ -1.66
ZNF540-202ENST00000343599 KRTAP10-8P60410 259 aa4.65□□□□□ -1.66
ZNF540-202ENST00000343599 Q6ZQY7 126 aa4.65□□□□□ -1.66
ZNF540-202ENST00000343599 SPANXA2-OT1Q8N9U9 137 aa4.65□□□□□ -1.66
ZNF540-202ENST00000343599 PRR34Q9NV39 138 aa4.65□□□□□ -1.66
ZNF540-202ENST00000343599 IGLV5-52A0A0A0MRZ9 124 aa4.65□□□□□ -1.67
ZNF540-202ENST00000343599 LINC00313P59037 77 aa4.65□□□□□ -1.67
ZNF540-202ENST00000343599 C10orf25Q5T742 122 aa4.65□□□□□ -1.67
ZNF540-202ENST00000343599 IGKV3-20P01619 116 aa4.64□□□□□ -1.67
ZNF540-202ENST00000343599 COX17Q14061 63 aa4.64□□□□□ -1.67
ZNF540-202ENST00000343599 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.64□□□□□ -1.67
ZNF540-202ENST00000343599 KRTAP1-5Q9BYS1 174 aa4.64□□□□□ -1.67
ZNF540-202ENST00000343599 NOTCH3Q9UM47 2321 aa4.64□□□□□ -1.67
ZNF540-202ENST00000343599 MT1HL1P0DM35 61 aa4.64□□□□□ -1.67
ZNF540-202ENST00000343599 LINC00208Q96KT6 92 aa4.64□□□□□ -1.67
ZNF540-202ENST00000343599 MYCBP2O75592 4640 aa4.64□□□□□ -1.67
ZNF540-202ENST00000343599 ZNF706Q9Y5V0 76 aaPredicted RBP4.64□□□□□ -1.67
ZNF540-202ENST00000343599 A0A1B0GUV1 79 aa4.63□□□□□ -1.67
ZNF540-202ENST00000343599 Q8IZM0 81 aa4.63□□□□□ -1.67
ZNF540-202ENST00000343599 IGLV10-54A0A075B6I4 117 aa4.62□□□□□ -1.67
ZNF540-202ENST00000343599 PRR4Q16378 134 aa4.62□□□□□ -1.67
ZNF540-202ENST00000343599 C9orf163Q8N9P6 203 aa4.62□□□□□ -1.67
ZNF540-202ENST00000343599 IGLV6-57P01721 117 aa4.62□□□□□ -1.67
ZNF540-202ENST00000343599 ASB16-AS1Q495Z4 193 aa4.61□□□□□ -1.67
ZNF540-202ENST00000343599 IGLV1-50A0A075B6I6 118 aa4.61□□□□□ -1.67
ZNF540-202ENST00000343599 ST20-AS1Q8NBB2 130 aa4.61□□□□□ -1.67
ZNF540-202ENST00000343599 Q8NDZ9 215 aa4.61□□□□□ -1.67
ZNF540-202ENST00000343599 A0A087X002 238 aa4.61□□□□□ -1.67
ZNF540-202ENST00000343599 KCNQ1DNQ9H478 68 aa4.61□□□□□ -1.67
ZNF540-202ENST00000343599 A0A1B0GW54 56 aa4.6□□□□□ -1.67
ZNF540-202ENST00000343599 NBEAL2Q6ZNJ1 2754 aa4.6□□□□□ -1.67
ZNF540-202ENST00000343599 WNK1Q9H4A3 2382 aa4.6□□□□□ -1.67
ZNF540-202ENST00000343599 PRM2P04554 102 aa4.6□□□□□ -1.67
ZNF540-202ENST00000343599 PANO1I0J062 215 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms