RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 MYCBP2O75592 4640 aa8.33□□□□□ -1.08
PMS1-201ENST00000342075 TMEM256-PLSCR3K7ERE1 68 aa8.33□□□□□ -1.08
PMS1-201ENST00000342075 C14orf132Q9NPU4 83 aa8.31□□□□□ -1.08
PMS1-201ENST00000342075 NDUFV3P56181 108 aaKnown RBP8.31□□□□□ -1.08
PMS1-201ENST00000342075 TEN1Q86WV5 123 aa8.3□□□□□ -1.08
PMS1-201ENST00000342075 IGLV9-49A0A0B4J1Y8 123 aa8.29□□□□□ -1.08
PMS1-201ENST00000342075 PKHD1L1Q86WI1 4243 aa8.29□□□□□ -1.08
PMS1-201ENST00000342075 A0A087X002 238 aa8.28□□□□□ -1.08
PMS1-201ENST00000342075 OCIAD2Q56VL3 154 aa8.28□□□□□ -1.08
PMS1-201ENST00000342075 KRTAP1-4P0C5Y4 121 aa8.28□□□□□ -1.08
PMS1-201ENST00000342075 KRTAP4-5Q9BYR2 181 aa8.28□□□□□ -1.08
PMS1-201ENST00000342075 FAM229AH3BQW9 127 aa8.27□□□□□ -1.08
PMS1-201ENST00000342075 LINC01600Q96MT4 127 aa8.27□□□□□ -1.08
PMS1-201ENST00000342075 LINC00483Q53H64 154 aa8.26□□□□□ -1.09
PMS1-201ENST00000342075 ABCA13Q86UQ4 5058 aa8.25□□□□□ -1.09
PMS1-201ENST00000342075 SPRR1BP22528 89 aa8.25□□□□□ -1.09
PMS1-201ENST00000342075 OBSCN-AS1Q96MR7 158 aa8.25□□□□□ -1.09
PMS1-201ENST00000342075 PLA2G1BP04054 148 aaKnown RBP8.24□□□□□ -1.09
PMS1-201ENST00000342075 SPINK6Q6UWN8 80 aa8.24□□□□□ -1.09
PMS1-201ENST00000342075 ZNF706Q9Y5V0 76 aaPredicted RBP8.24□□□□□ -1.09
PMS1-201ENST00000342075 RBM3P98179 157 aaKnown RBP8.23□□□□□ -1.09
PMS1-201ENST00000342075 MOBPQ13875 183 aa8.23□□□□□ -1.09
PMS1-201ENST00000342075 C9orf153Q5TBE3 101 aa8.23□□□□□ -1.09
PMS1-201ENST00000342075 Q8N1X5 172 aa8.23□□□□□ -1.09
PMS1-201ENST00000342075 KRTAP13-2Q52LG2 175 aa8.22□□□□□ -1.09
PMS1-201ENST00000342075 VPS25Q9BRG1 176 aa8.22□□□□□ -1.09
PMS1-201ENST00000342075 HERC2O95714 4834 aa8.22□□□□□ -1.09
PMS1-201ENST00000342075 PPDPFLQ8WWR9 84 aa8.21□□□□□ -1.1
PMS1-201ENST00000342075 F8WEM9 126 aa8.2□□□□□ -1.1
PMS1-201ENST00000342075 IGFL1Q6UW32 110 aa8.2□□□□□ -1.1
PMS1-201ENST00000342075 PRR26Q8N8Z3 221 aa8.2□□□□□ -1.1
PMS1-201ENST00000342075 JMJD7-PLA2G4BH0Y9G9 81 aa8.19□□□□□ -1.1
PMS1-201ENST00000342075 TRBV7-4A0A0J9YYF1 115 aa8.19□□□□□ -1.1
PMS1-201ENST00000342075 GHRHP01286 108 aa8.19□□□□□ -1.1
PMS1-201ENST00000342075 HRCT1Q6UXD1 115 aa8.19□□□□□ -1.1
PMS1-201ENST00000342075 Q6ZQT0 140 aa8.19□□□□□ -1.1
PMS1-201ENST00000342075 DSCR8Q96T75 97 aa8.19□□□□□ -1.1
PMS1-201ENST00000342075 FAT3Q8TDW7 4589 aa8.18□□□□□ -1.1
PMS1-201ENST00000342075 H3BQ85 93 aa8.18□□□□□ -1.1
PMS1-201ENST00000342075 TNXBP22105 4242 aa8.17□□□□□ -1.1
PMS1-201ENST00000342075 A0A1W2PNM2 257 aa8.16□□□□□ -1.1
PMS1-201ENST00000342075 CCKP06307 115 aa8.16□□□□□ -1.1
PMS1-201ENST00000342075 IGLV8-61A0A075B6I0 122 aa8.14□□□□□ -1.11
PMS1-201ENST00000342075 LOC110117498A0A087WWA1 95 aa8.14□□□□□ -1.11
PMS1-201ENST00000342075 CRYGAP11844 174 aa8.14□□□□□ -1.11
PMS1-201ENST00000342075 Q8NBF4 154 aa8.13□□□□□ -1.11
PMS1-201ENST00000342075 FAM229BQ4G0N7 80 aa8.11□□□□□ -1.11
PMS1-201ENST00000342075 PCLOQ9Y6V0 5065 aa8.1□□□□□ -1.11
PMS1-201ENST00000342075 TYMSOSQ8TAI1 123 aa8.1□□□□□ -1.11
PMS1-201ENST00000342075 LINC00846Q9NV44 126 aa8.09□□□□□ -1.11
PMS1-201ENST00000342075 A0A087WSZ3 146 aa8.07□□□□□ -1.12
PMS1-201ENST00000342075 Q6JHZ5 121 aa8.07□□□□□ -1.12
PMS1-201ENST00000342075 DMBT1Q9UGM3 2413 aaPredicted RBP8.07□□□□□ -1.12
PMS1-201ENST00000342075 K7ERU9 68 aa8.05□□□□□ -1.12
PMS1-201ENST00000342075 PDE6GP18545 87 aa8.03□□□□□ -1.12
PMS1-201ENST00000342075 DEFB116Q30KQ4 102 aa8.03□□□□□ -1.12
PMS1-201ENST00000342075 SSBP3-AS1Q7Z2R9 100 aa8.03□□□□□ -1.12
PMS1-201ENST00000342075 J3QR89 54 aa8.03□□□□□ -1.12
PMS1-201ENST00000342075 CDIP1Q9H305 208 aa8.03□□□□□ -1.12
PMS1-201ENST00000342075 TRBV7-7A0A0K0K1E9 115 aa8.02□□□□□ -1.13
PMS1-201ENST00000342075 MT1HL1P0DM35 61 aa8□□□□□ -1.13
PMS1-201ENST00000342075 LINC00304Q8N9R0 145 aa8□□□□□ -1.13
PMS1-201ENST00000342075 FAM240AA0A1B0GVK7 77 aa7.99□□□□□ -1.13
PMS1-201ENST00000342075 KRTAP10-8P60410 259 aa7.99□□□□□ -1.13
PMS1-201ENST00000342075 Q6ZVQ6 151 aa7.99□□□□□ -1.13
PMS1-201ENST00000342075 Q6Q795 121 aa7.98□□□□□ -1.13
PMS1-201ENST00000342075 ACYP1P07311 99 aa7.95□□□□□ -1.14
PMS1-201ENST00000342075 NREPQ16612 68 aa7.95□□□□□ -1.14
PMS1-201ENST00000342075 IGKV3D-7A0A0C4DH55 119 aa7.94□□□□□ -1.14
PMS1-201ENST00000342075 C4orf48Q5BLP8 95 aa7.94□□□□□ -1.14
PMS1-201ENST00000342075 RETNLBQ9BQ08 111 aa7.94□□□□□ -1.14
PMS1-201ENST00000342075 UBL5Q9BZL1 73 aa7.94□□□□□ -1.14
PMS1-201ENST00000342075 Q8N9L7 120 aa7.93□□□□□ -1.14
PMS1-201ENST00000342075 Q96NJ1 140 aa7.93□□□□□ -1.14
PMS1-201ENST00000342075 MT-ATP8P03928 68 aa7.92□□□□□ -1.14
PMS1-201ENST00000342075 CD164Q04900 197 aa7.92□□□□□ -1.14
PMS1-201ENST00000342075 SPINK1P00995 79 aa7.9□□□□□ -1.14
PMS1-201ENST00000342075 LINC00472Q9H8W2 130 aa7.9□□□□□ -1.14
PMS1-201ENST00000342075 C1orf195Q5TG92 126 aa7.87□□□□□ -1.15
PMS1-201ENST00000342075 HERC1Q15751 4861 aa7.87□□□□□ -1.15
PMS1-201ENST00000342075 A0A1B0GW54 56 aa7.86□□□□□ -1.15
PMS1-201ENST00000342075 BPY2O14599 106 aa7.86□□□□□ -1.15
PMS1-201ENST00000342075 IGKV4-1P06312 121 aa7.86□□□□□ -1.15
PMS1-201ENST00000342075 DSCR10P59022 87 aa7.86□□□□□ -1.15
PMS1-201ENST00000342075 LINC00643Q86TS7 51 aa7.86□□□□□ -1.15
PMS1-201ENST00000342075 SS18L2Q9UHA2 77 aa7.86□□□□□ -1.15
PMS1-201ENST00000342075 OXTP01178 125 aa7.85□□□□□ -1.15
PMS1-201ENST00000342075 KRTAP29-1A8MX34 341 aaPredicted RBP7.85□□□□□ -1.15
PMS1-201ENST00000342075 K7EQZ3 153 aa7.84□□□□□ -1.15
PMS1-201ENST00000342075 C21orf62-AS1Q17RA5 79 aa7.84□□□□□ -1.15
PMS1-201ENST00000342075 SPAG11AQ6PDA7 123 aa7.84□□□□□ -1.15
PMS1-201ENST00000342075 SIGMAR1Q99720 223 aa7.84□□□□□ -1.15
PMS1-201ENST00000342075 A0A087WVE0 104 aa7.84□□□□□ -1.16
PMS1-201ENST00000342075 LIMD2Q9BT23 127 aa7.84□□□□□ -1.16
PMS1-201ENST00000342075 Q5XG85 94 aa7.82□□□□□ -1.16
PMS1-201ENST00000342075 J3QL48 77 aa7.81□□□□□ -1.16
PMS1-201ENST00000342075 HIST1H4AP62805 103 aaKnown RBP7.81□□□□□ -1.16
PMS1-201ENST00000342075 NOTCH2NLQ7Z3S9 236 aa7.8□□□□□ -1.16
PMS1-201ENST00000342075 ASB16-AS1Q495Z4 193 aa7.79□□□□□ -1.16
PMS1-201ENST00000342075 RPS29P62273 56 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 163.3 ms