RNA–Protein interactions for RNA: ENST00000341290.6

PERM1-201, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PERM1, Length 3,035 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-201ENST00000341290 COL7A1Q02388 2944 aa9.76□□□□□ -0.85
PERM1-201ENST00000341290 A8MUN3 132 aa9.74□□□□□ -0.85
PERM1-201ENST00000341290 Q1T7F1 81 aa9.74□□□□□ -0.85
PERM1-201ENST00000341290 MRPL55Q7Z7F7 128 aaKnown RBP9.74□□□□□ -0.85
PERM1-201ENST00000341290 HUWE1Q7Z6Z7 4374 aaKnown RBP9.74□□□□□ -0.85
PERM1-201ENST00000341290 K7EQZ3 153 aa9.74□□□□□ -0.85
PERM1-201ENST00000341290 IGKV2-24A0A0C4DH68 120 aa9.73□□□□□ -0.85
PERM1-201ENST00000341290 Q8NBF4 154 aa9.72□□□□□ -0.85
PERM1-201ENST00000341290 DNAH10Q8IVF4 4471 aa9.72□□□□□ -0.85
PERM1-201ENST00000341290 TNP2Q05952 138 aa9.72□□□□□ -0.85
PERM1-201ENST00000341290 PRLHP81277 87 aa9.71□□□□□ -0.85
PERM1-201ENST00000341290 TLX1NBP0CAT3 122 aa9.71□□□□□ -0.86
PERM1-201ENST00000341290 DSCR10P59022 87 aa9.71□□□□□ -0.86
PERM1-201ENST00000341290 SPRR1AP35321 89 aa9.7□□□□□ -0.86
PERM1-201ENST00000341290 CD164Q04900 197 aa9.69□□□□□ -0.86
PERM1-201ENST00000341290 LINC00476Q8WZB0 136 aa9.68□□□□□ -0.86
PERM1-201ENST00000341290 REG3GQ6UW15 175 aa9.68□□□□□ -0.86
PERM1-201ENST00000341290 PLA2G2DQ9UNK4 145 aa9.67□□□□□ -0.86
PERM1-201ENST00000341290 SPTSSBQ8NFR3 76 aa9.66□□□□□ -0.86
PERM1-201ENST00000341290 DYNC2H1Q8NCM8 4307 aaKnown RBP9.65□□□□□ -0.86
PERM1-201ENST00000341290 WFDC13Q8IUB5 93 aa9.65□□□□□ -0.86
PERM1-201ENST00000341290 PRKDCP78527 4128 aaKnown RBP9.64□□□□□ -0.87
PERM1-201ENST00000341290 IGLV5-37A0A075B6J1 123 aa9.64□□□□□ -0.87
PERM1-201ENST00000341290 SPRR4Q96PI1 79 aa9.64□□□□□ -0.87
PERM1-201ENST00000341290 DNAH1Q9P2D7 4330 aa9.64□□□□□ -0.87
PERM1-201ENST00000341290 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.64□□□□□ -0.87
PERM1-201ENST00000341290 PSCAO43653 123 aa9.64□□□□□ -0.87
PERM1-201ENST00000341290 RPL37AP61513 92 aaKnown RBP9.64□□□□□ -0.87
PERM1-201ENST00000341290 A0A096LNI7 61 aa9.63□□□□□ -0.87
PERM1-201ENST00000341290 IGFL1Q6UW32 110 aa9.63□□□□□ -0.87
PERM1-201ENST00000341290 A0A087WSZ3 146 aa9.62□□□□□ -0.87
PERM1-201ENST00000341290 CHKB-CPT1BH3BT56 60 aa9.62□□□□□ -0.87
PERM1-201ENST00000341290 Q5VV11 94 aa9.6□□□□□ -0.87
PERM1-201ENST00000341290 KRTAP1-5Q9BYS1 174 aa9.6□□□□□ -0.87
PERM1-201ENST00000341290 HCG22E2RYF7 251 aa9.59□□□□□ -0.87
PERM1-201ENST00000341290 CHTF8P0CG12 524 aa9.59□□□□□ -0.87
PERM1-201ENST00000341290 RBM12B-AS1Q9P1G2 102 aa9.59□□□□□ -0.87
PERM1-201ENST00000341290 DNAH7Q8WXX0 4024 aa9.58□□□□□ -0.88
PERM1-201ENST00000341290 ZCCHC13Q8WW36 166 aaKnown RBP9.58□□□□□ -0.88
PERM1-201ENST00000341290 MEGF8Q7Z7M0 2845 aa9.58□□□□□ -0.88
PERM1-201ENST00000341290 KRTAP11-1Q8IUC1 163 aa9.57□□□□□ -0.88
PERM1-201ENST00000341290 A0A1B0GW54 56 aa9.56□□□□□ -0.88
PERM1-201ENST00000341290 LCE6AA0A183 80 aa9.56□□□□□ -0.88
PERM1-201ENST00000341290 C16orf90A8MZG2 172 aa9.56□□□□□ -0.88
PERM1-201ENST00000341290 PHF5AQ7RTV0 110 aaKnown RBP9.55□□□□□ -0.88
PERM1-201ENST00000341290 UBE2AP49459 152 aa9.55□□□□□ -0.88
PERM1-201ENST00000341290 PRR15LQ9BU68 103 aa9.55□□□□□ -0.88
PERM1-201ENST00000341290 KTN1-AS1Q86SY8 53 aa9.54□□□□□ -0.88
PERM1-201ENST00000341290 CYP4F30PQ9H0H9 118 aa9.52□□□□□ -0.89
PERM1-201ENST00000341290 LINC00208Q96KT6 92 aa9.5□□□□□ -0.89
PERM1-201ENST00000341290 A6NED7 52 aa9.48□□□□□ -0.89
PERM1-201ENST00000341290 UBE2DNLQ8IWF7 75 aa9.48□□□□□ -0.89
PERM1-201ENST00000341290 Q8N9P0 234 aaPredicted RBP9.48□□□□□ -0.89
PERM1-201ENST00000341290 LCA10Q71F78 164 aa9.47□□□□□ -0.89
PERM1-201ENST00000341290 FBN3Q75N90 2809 aa9.46□□□□□ -0.9
PERM1-201ENST00000341290 MP68P56378 58 aa9.45□□□□□ -0.9
PERM1-201ENST00000341290 NDUFB1O75438 58 aa9.44□□□□□ -0.9
PERM1-201ENST00000341290 CASC2Q6XLA1 102 aa9.43□□□□□ -0.9
PERM1-201ENST00000341290 DNAH6Q9C0G6 4158 aa9.43□□□□□ -0.9
PERM1-201ENST00000341290 H0Y9J4 135 aa9.42□□□□□ -0.9
PERM1-201ENST00000341290 CNBPP62633 177 aaKnown RBP9.42□□□□□ -0.9
PERM1-201ENST00000341290 PANO1I0J062 215 aa9.41□□□□□ -0.9
PERM1-201ENST00000341290 LIMD2Q9BT23 127 aa9.41□□□□□ -0.9
PERM1-201ENST00000341290 IGLV8-61A0A075B6I0 122 aa9.41□□□□□ -0.9
PERM1-201ENST00000341290 H0Y9P7 68 aa9.4□□□□□ -0.9
PERM1-201ENST00000341290 NUPR2A6NF83 97 aa9.39□□□□□ -0.91
PERM1-201ENST00000341290 KRTAP29-1A8MX34 341 aaPredicted RBP9.39□□□□□ -0.91
PERM1-201ENST00000341290 ATP11AUNQ6ZP68 121 aa9.38□□□□□ -0.91
PERM1-201ENST00000341290 ALMS1Q8TCU4 4167 aa9.38□□□□□ -0.91
PERM1-201ENST00000341290 WWC2-AS2Q96NR7 200 aa9.38□□□□□ -0.91
PERM1-201ENST00000341290 IGLV9-49A0A0B4J1Y8 123 aa9.37□□□□□ -0.91
PERM1-201ENST00000341290 A6NN06 94 aa9.36□□□□□ -0.91
PERM1-201ENST00000341290 APLNQ9ULZ1 77 aa9.36□□□□□ -0.91
PERM1-201ENST00000341290 LINC00472Q9H8W2 130 aa9.36□□□□□ -0.91
PERM1-201ENST00000341290 A8MWP4 228 aa9.35□□□□□ -0.91
PERM1-201ENST00000341290 NDUFS5O43920 106 aa9.34□□□□□ -0.91
PERM1-201ENST00000341290 VPS13DQ5THJ4 4388 aa9.32□□□□□ -0.92
PERM1-201ENST00000341290 Q75L30 129 aa9.31□□□□□ -0.92
PERM1-201ENST00000341290 COA5Q86WW8 74 aa9.31□□□□□ -0.92
PERM1-201ENST00000341290 C9orf163Q8N9P6 203 aa9.31□□□□□ -0.92
PERM1-201ENST00000341290 PLECQ15149 4684 aaKnown RBP9.31□□□□□ -0.92
PERM1-201ENST00000341290 SPAG11AQ6PDA7 123 aa9.3□□□□□ -0.92
PERM1-201ENST00000341290 STARD9Q9P2P6 4700 aa9.29□□□□□ -0.92
PERM1-201ENST00000341290 PCOTHQ58A44 107 aa9.29□□□□□ -0.92
PERM1-201ENST00000341290 SPRR1BP22528 89 aa9.29□□□□□ -0.92
PERM1-201ENST00000341290 C4orf48Q5BLP8 95 aa9.29□□□□□ -0.92
PERM1-201ENST00000341290 ANAPC11Q9NYG5 84 aa9.29□□□□□ -0.92
PERM1-201ENST00000341290 C14orf177Q52M58 125 aa9.29□□□□□ -0.92
PERM1-201ENST00000341290 MOBPQ13875 183 aa9.28□□□□□ -0.92
PERM1-201ENST00000341290 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.28□□□□□ -0.92
PERM1-201ENST00000341290 MMP24-AS1A0A0U1RRL7 71 aa9.28□□□□□ -0.92
PERM1-201ENST00000341290 C7orf65Q6ZTY9 151 aa9.28□□□□□ -0.92
PERM1-201ENST00000341290 TGP01266 2768 aa9.28□□□□□ -0.92
PERM1-201ENST00000341290 SPANXA2-OT1Q8N9U9 137 aa9.27□□□□□ -0.93
PERM1-201ENST00000341290 CDC42SE1Q9NRR8 79 aa9.27□□□□□ -0.93
PERM1-201ENST00000341290 FRAS1Q86XX4 4008 aa9.26□□□□□ -0.93
PERM1-201ENST00000341290 LOC101927531A0A1B0GV80 90 aa9.26□□□□□ -0.93
PERM1-201ENST00000341290 IGHV6-1A0A0B4J1U7 121 aa9.23□□□□□ -0.93
PERM1-201ENST00000341290 NBDYA0A0U1RRE5 68 aa9.23□□□□□ -0.93
PERM1-201ENST00000341290 SPINK7P58062 85 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms