RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 DMBT1Q9UGM3 2413 aaPredicted RBP4.38□□□□□ -1.71
NUP43-201ENST00000340413 KMT2AQ03164 3969 aa4.38□□□□□ -1.71
NUP43-201ENST00000340413 PKHD1L1Q86WI1 4243 aa4.38□□□□□ -1.71
NUP43-201ENST00000340413 TRBV7-7A0A0K0K1E9 115 aa4.38□□□□□ -1.71
NUP43-201ENST00000340413 C1orf137Q5JT78 98 aa4.37□□□□□ -1.71
NUP43-201ENST00000340413 FAM30AQ9NZY2 134 aa4.37□□□□□ -1.71
NUP43-201ENST00000340413 DNAH5Q8TE73 4624 aa4.37□□□□□ -1.71
NUP43-201ENST00000340413 DYNC1H1Q14204 4646 aaKnown RBP4.36□□□□□ -1.71
NUP43-201ENST00000340413 ERC2-IT1O76042 136 aa4.36□□□□□ -1.71
NUP43-201ENST00000340413 SSBP3-AS1Q7Z2R9 100 aa4.36□□□□□ -1.71
NUP43-201ENST00000340413 PRLHP81277 87 aa4.35□□□□□ -1.71
NUP43-201ENST00000340413 Q8NBF4 154 aa4.35□□□□□ -1.71
NUP43-201ENST00000340413 IMUPQ9GZP8 106 aa4.35□□□□□ -1.71
NUP43-201ENST00000340413 XGP55808 180 aa4.34□□□□□ -1.71
NUP43-201ENST00000340413 RPS29P62273 56 aaKnown RBP4.34□□□□□ -1.71
NUP43-201ENST00000340413 LINC00643Q86TS7 51 aa4.34□□□□□ -1.71
NUP43-201ENST00000340413 HIGD2AQ9BW72 106 aa4.34□□□□□ -1.71
NUP43-201ENST00000340413 CRYGAP11844 174 aa4.34□□□□□ -1.72
NUP43-201ENST00000340413 SEC61GP60059 68 aa4.34□□□□□ -1.72
NUP43-201ENST00000340413 Q5XG85 94 aa4.34□□□□□ -1.72
NUP43-201ENST00000340413 MTURNQ8N3F0 131 aa4.34□□□□□ -1.72
NUP43-201ENST00000340413 PLA2G1BP04054 148 aaKnown RBP4.33□□□□□ -1.72
NUP43-201ENST00000340413 ASB16-AS1Q495Z4 193 aa4.33□□□□□ -1.72
NUP43-201ENST00000340413 ST20-AS1Q8NBB2 130 aa4.33□□□□□ -1.72
NUP43-201ENST00000340413 C14orf132Q9NPU4 83 aa4.33□□□□□ -1.72
NUP43-201ENST00000340413 SCGB1A1P11684 91 aa4.32□□□□□ -1.72
NUP43-201ENST00000340413 HYDINQ4G0P3 5121 aa4.32□□□□□ -1.72
NUP43-201ENST00000340413 H3BS24 57 aa4.31□□□□□ -1.72
NUP43-201ENST00000340413 CXCL6P80162 114 aa4.31□□□□□ -1.72
NUP43-201ENST00000340413 A0A1B0GV72 72 aa4.31□□□□□ -1.72
NUP43-201ENST00000340413 KRTAP10-4P60372 401 aaPredicted RBP4.31□□□□□ -1.72
NUP43-201ENST00000340413 UBL5Q9BZL1 73 aa4.31□□□□□ -1.72
NUP43-201ENST00000340413 SS18L2Q9UHA2 77 aa4.31□□□□□ -1.72
NUP43-201ENST00000340413 GAGE2AQ6NT46 116 aa4.3□□□□□ -1.72
NUP43-201ENST00000340413 IGFL1Q6UW32 110 aa4.3□□□□□ -1.72
NUP43-201ENST00000340413 J3KT08 172 aa4.29□□□□□ -1.72
NUP43-201ENST00000340413 FAM229AH3BQW9 127 aa4.29□□□□□ -1.72
NUP43-201ENST00000340413 DEFB105AQ8NG35 78 aa4.29□□□□□ -1.72
NUP43-201ENST00000340413 SPAG11AQ6PDA7 123 aa4.29□□□□□ -1.72
NUP43-201ENST00000340413 A0A1W2PNM2 257 aa4.28□□□□□ -1.72
NUP43-201ENST00000340413 SIGMAR1Q99720 223 aa4.28□□□□□ -1.72
NUP43-201ENST00000340413 VPS13BQ7Z7G8 4022 aa4.27□□□□□ -1.73
NUP43-201ENST00000340413 KRTAP1-4P0C5Y4 121 aa4.27□□□□□ -1.73
NUP43-201ENST00000340413 HAMPP81172 84 aa4.27□□□□□ -1.73
NUP43-201ENST00000340413 LINC00846Q9NV44 126 aa4.26□□□□□ -1.73
NUP43-201ENST00000340413 VPS25Q9BRG1 176 aa4.26□□□□□ -1.73
NUP43-201ENST00000340413 Q6ZVQ6 151 aa4.25□□□□□ -1.73
NUP43-201ENST00000340413 LIMD2Q9BT23 127 aa4.25□□□□□ -1.73
NUP43-201ENST00000340413 NREPQ16612 68 aa4.24□□□□□ -1.73
NUP43-201ENST00000340413 APOBP04114 4563 aaKnown RBP4.24□□□□□ -1.73
NUP43-201ENST00000340413 Q8N1X5 172 aa4.23□□□□□ -1.73
NUP43-201ENST00000340413 LRP1BQ9NZR2 4599 aa4.23□□□□□ -1.73
NUP43-201ENST00000340413 SPINK1P00995 79 aa4.23□□□□□ -1.73
NUP43-201ENST00000340413 C9orf153Q5TBE3 101 aa4.23□□□□□ -1.73
NUP43-201ENST00000340413 C3orf22Q8N5N4 141 aa4.22□□□□□ -1.73
NUP43-201ENST00000340413 PKHD1P08F94 4074 aa4.22□□□□□ -1.73
NUP43-201ENST00000340413 MOBPQ13875 183 aa4.22□□□□□ -1.73
NUP43-201ENST00000340413 LINC00472Q9H8W2 130 aa4.21□□□□□ -1.73
NUP43-201ENST00000340413 FLG2Q5D862 2391 aaPredicted RBP4.21□□□□□ -1.73
NUP43-201ENST00000340413 KRTAP13-2Q52LG2 175 aa4.21□□□□□ -1.74
NUP43-201ENST00000340413 SMIM20Q8N5G0 67 aa4.21□□□□□ -1.74
NUP43-201ENST00000340413 HIST1H4AP62805 103 aaKnown RBP4.21□□□□□ -1.74
NUP43-201ENST00000340413 SRRM2Q9UQ35 2752 aaKnown RBP4.21□□□□□ -1.74
NUP43-201ENST00000340413 A0A0A0MQY5 61 aa4.21□□□□□ -1.74
NUP43-201ENST00000340413 OXTP01178 125 aa4.21□□□□□ -1.74
NUP43-201ENST00000340413 BPY2O14599 106 aa4.2□□□□□ -1.74
NUP43-201ENST00000340413 IGLV9-49A0A0B4J1Y8 123 aa4.2□□□□□ -1.74
NUP43-201ENST00000340413 Q5VSD8 79 aa4.2□□□□□ -1.74
NUP43-201ENST00000340413 TYMSOSQ8TAI1 123 aa4.19□□□□□ -1.74
NUP43-201ENST00000340413 C8orf87E5RJ46 101 aa4.19□□□□□ -1.74
NUP43-201ENST00000340413 MT-ATP8P03928 68 aa4.19□□□□□ -1.74
NUP43-201ENST00000340413 A8MWP4 228 aa4.18□□□□□ -1.74
NUP43-201ENST00000340413 A0A087WSZ3 146 aa4.18□□□□□ -1.74
NUP43-201ENST00000340413 Q96NJ1 140 aa4.18□□□□□ -1.74
NUP43-201ENST00000340413 A0A087X002 238 aa4.17□□□□□ -1.74
NUP43-201ENST00000340413 KRTAP10-8P60410 259 aa4.17□□□□□ -1.74
NUP43-201ENST00000340413 LINC00304Q8N9R0 145 aa4.17□□□□□ -1.74
NUP43-201ENST00000340413 KMT2CQ8NEZ4 4911 aaKnown RBP4.17□□□□□ -1.74
NUP43-201ENST00000340413 NDUFB1O75438 58 aa4.16□□□□□ -1.74
NUP43-201ENST00000340413 ATOX1O00244 68 aa4.16□□□□□ -1.74
NUP43-201ENST00000340413 IGKV4-1P06312 121 aa4.16□□□□□ -1.74
NUP43-201ENST00000340413 DSCR10P59022 87 aa4.15□□□□□ -1.74
NUP43-201ENST00000340413 PRR15Q8IV56 129 aa4.15□□□□□ -1.75
NUP43-201ENST00000340413 FP248Q71RG6 208 aaPredicted RBP4.14□□□□□ -1.75
NUP43-201ENST00000340413 SMR3BP02814 79 aaPredicted RBP4.14□□□□□ -1.75
NUP43-201ENST00000340413 C5orf47Q569G3 176 aa4.14□□□□□ -1.75
NUP43-201ENST00000340413 RYR1P21817 5038 aa4.13□□□□□ -1.75
NUP43-201ENST00000340413 KRTAP29-1A8MX34 341 aaPredicted RBP4.13□□□□□ -1.75
NUP43-201ENST00000340413 RYR3Q15413 4870 aa4.13□□□□□ -1.75
NUP43-201ENST00000340413 A0A1B0GVX0 72 aa4.13□□□□□ -1.75
NUP43-201ENST00000340413 TMEM254Q8TBM7 123 aa4.12□□□□□ -1.75
NUP43-201ENST00000340413 IGKV3D-7A0A0C4DH55 119 aa4.12□□□□□ -1.75
NUP43-201ENST00000340413 ANAPC11Q9NYG5 84 aa4.12□□□□□ -1.75
NUP43-201ENST00000340413 V9GYY9 64 aa4.12□□□□□ -1.75
NUP43-201ENST00000340413 HCG22E2RYF7 251 aa4.11□□□□□ -1.75
NUP43-201ENST00000340413 PRR26Q8N8Z3 221 aa4.11□□□□□ -1.75
NUP43-201ENST00000340413 HSPG2P98160 4391 aa4.11□□□□□ -1.75
NUP43-201ENST00000340413 C1orf195Q5TG92 126 aa4.11□□□□□ -1.75
NUP43-201ENST00000340413 TP53AIP1Q9HCN2 124 aa4.11□□□□□ -1.75
NUP43-201ENST00000340413 H3BPC8 53 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms