RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 TRAV22A0A0B4J277 110 aa5.83□□□□□ -1.48
RTN3-202ENST00000339997 EPM2AB3EWF7 344 aa5.83□□□□□ -1.48
RTN3-202ENST00000339997 LOC110117498A0A087WWA1 95 aa5.82□□□□□ -1.48
RTN3-202ENST00000339997 TYMSOSQ8TAI1 123 aa5.82□□□□□ -1.48
RTN3-202ENST00000339997 UQCR11O14957 56 aa5.81□□□□□ -1.48
RTN3-202ENST00000339997 C16orf95Q9H693 158 aa5.81□□□□□ -1.48
RTN3-202ENST00000339997 DNAH3Q8TD57 4116 aa5.81□□□□□ -1.48
RTN3-202ENST00000339997 LINC00313P59037 77 aa5.81□□□□□ -1.48
RTN3-202ENST00000339997 H7BZZ5 65 aa5.8□□□□□ -1.48
RTN3-202ENST00000339997 WIPF1O43516 503 aa5.8□□□□□ -1.48
RTN3-202ENST00000339997 H3BPC8 53 aa5.8□□□□□ -1.48
RTN3-202ENST00000339997 DNAH7Q8WXX0 4024 aa5.8□□□□□ -1.48
RTN3-202ENST00000339997 ANAPC11Q9NYG5 84 aa5.79□□□□□ -1.48
RTN3-202ENST00000339997 IGLV6-57P01721 117 aa5.79□□□□□ -1.48
RTN3-202ENST00000339997 C16orf90A8MZG2 172 aa5.78□□□□□ -1.48
RTN3-202ENST00000339997 Q8NAQ8 132 aa5.78□□□□□ -1.48
RTN3-202ENST00000339997 LINC00588Q9Y4M8 146 aa5.78□□□□□ -1.48
RTN3-202ENST00000339997 KMT2BQ9UMN6 2715 aaPredicted RBP5.77□□□□□ -1.49
RTN3-202ENST00000339997 COA5Q86WW8 74 aa5.77□□□□□ -1.49
RTN3-202ENST00000339997 Q96NJ1 140 aa5.76□□□□□ -1.49
RTN3-202ENST00000339997 A0A1B0GW54 56 aa5.75□□□□□ -1.49
RTN3-202ENST00000339997 DNAH10OSP0CZ25 163 aa5.75□□□□□ -1.49
RTN3-202ENST00000339997 Q8N377 158 aa5.75□□□□□ -1.49
RTN3-202ENST00000339997 LINC00528Q8N1L1 170 aa5.75□□□□□ -1.49
RTN3-202ENST00000339997 LOC101927531A0A1B0GV80 90 aa5.75□□□□□ -1.49
RTN3-202ENST00000339997 BCE1O60756 84 aa5.74□□□□□ -1.49
RTN3-202ENST00000339997 KLKP1Q107X0 134 aa5.74□□□□□ -1.49
RTN3-202ENST00000339997 ZNF575Q86XF7 245 aa5.74□□□□□ -1.49
RTN3-202ENST00000339997 GIG44P09565 113 aaPredicted RBP5.74□□□□□ -1.49
RTN3-202ENST00000339997 IGFL1Q6UW32 110 aa5.74□□□□□ -1.49
RTN3-202ENST00000339997 ZANQ9Y493 2812 aa5.73□□□□□ -1.49
RTN3-202ENST00000339997 ERC2-IT1O76042 136 aa5.73□□□□□ -1.49
RTN3-202ENST00000339997 CYSTM1Q9H1C7 97 aa5.73□□□□□ -1.49
RTN3-202ENST00000339997 OBSCN-AS1Q96MR7 158 aa5.73□□□□□ -1.49
RTN3-202ENST00000339997 LINC00483Q53H64 154 aa5.72□□□□□ -1.49
RTN3-202ENST00000339997 IGLV5-37A0A075B6J1 123 aa5.71□□□□□ -1.49
RTN3-202ENST00000339997 RBM12B-AS1Q9P1G2 102 aa5.71□□□□□ -1.49
RTN3-202ENST00000339997 CASC10Q5T4H9 136 aa5.71□□□□□ -1.5
RTN3-202ENST00000339997 CAMK2N1Q7Z7J9 78 aa5.7□□□□□ -1.5
RTN3-202ENST00000339997 IGLV5-48A0A075B6I7 105 aa5.7□□□□□ -1.5
RTN3-202ENST00000339997 A8MWP4 228 aa5.7□□□□□ -1.5
RTN3-202ENST00000339997 IGLV1-50A0A075B6I6 118 aa5.7□□□□□ -1.5
RTN3-202ENST00000339997 KRTAP24-1Q3LI83 254 aa5.7□□□□□ -1.5
RTN3-202ENST00000339997 CDC42SE1Q9NRR8 79 aa5.69□□□□□ -1.5
RTN3-202ENST00000339997 GVQW2A0A096LPI5 108 aaPredicted RBP5.69□□□□□ -1.5
RTN3-202ENST00000339997 DSCR10P59022 87 aa5.69□□□□□ -1.5
RTN3-202ENST00000339997 C15orf56Q8N910 161 aa5.69□□□□□ -1.5
RTN3-202ENST00000339997 CYP4F30PQ9H0H9 118 aa5.69□□□□□ -1.5
RTN3-202ENST00000339997 A0A1W2PNM2 257 aa5.69□□□□□ -1.5
RTN3-202ENST00000339997 MIR22HGQ0VDD5 57 aa5.68□□□□□ -1.5
RTN3-202ENST00000339997 KCNQ1DNQ9H478 68 aa5.68□□□□□ -1.5
RTN3-202ENST00000339997 COL7A1Q02388 2944 aa5.68□□□□□ -1.5
RTN3-202ENST00000339997 C8orf17Q9NRJ1 99 aa5.68□□□□□ -1.5
RTN3-202ENST00000339997 KTN1-AS1Q86SY8 53 aa5.68□□□□□ -1.5
RTN3-202ENST00000339997 HIVEP1P15822 2718 aa5.67□□□□□ -1.5
RTN3-202ENST00000339997 A0A0A0MQY5 61 aa5.67□□□□□ -1.5
RTN3-202ENST00000339997 RTL8CO15255 209 aa5.67□□□□□ -1.5
RTN3-202ENST00000339997 PRR15Q8IV56 129 aa5.67□□□□□ -1.5
RTN3-202ENST00000339997 PRR26Q8N8Z3 221 aa5.67□□□□□ -1.5
RTN3-202ENST00000339997 MRPL34Q9BQ48 92 aaKnown RBP5.67□□□□□ -1.5
RTN3-202ENST00000339997 FLNCQ14315 2725 aa5.66□□□□□ -1.5
RTN3-202ENST00000339997 NBDYA0A0U1RRE5 68 aa5.65□□□□□ -1.5
RTN3-202ENST00000339997 C19orf73Q9NVV2 129 aa5.65□□□□□ -1.5
RTN3-202ENST00000339997 TENM4Q6N022 2769 aa5.65□□□□□ -1.51
RTN3-202ENST00000339997 PRR34Q9NV39 138 aa5.64□□□□□ -1.51
RTN3-202ENST00000339997 A0A096LNT2 108 aa5.64□□□□□ -1.51
RTN3-202ENST00000339997 KLK9Q2XQG4 91 aa5.64□□□□□ -1.51
RTN3-202ENST00000339997 FAM104AQ969W3 186 aa5.63□□□□□ -1.51
RTN3-202ENST00000339997 A0A0D9SG42 100 aa5.63□□□□□ -1.51
RTN3-202ENST00000339997 C9orf92A6NGG3 77 aa5.63□□□□□ -1.51
RTN3-202ENST00000339997 IGSF10Q6WRI0 2623 aa5.62□□□□□ -1.51
RTN3-202ENST00000339997 M0R2T5 61 aa5.62□□□□□ -1.51
RTN3-202ENST00000339997 DNAH9Q9NYC9 4486 aa5.62□□□□□ -1.51
RTN3-202ENST00000339997 KRTAP10-3P60369 221 aa5.62□□□□□ -1.51
RTN3-202ENST00000339997 FAM229BQ4G0N7 80 aa5.62□□□□□ -1.51
RTN3-202ENST00000339997 WWC2-AS2Q96NR7 200 aa5.62□□□□□ -1.51
RTN3-202ENST00000339997 H3BNG1 76 aa5.62□□□□□ -1.51
RTN3-202ENST00000339997 KRTAP10-11P60412 298 aa5.61□□□□□ -1.51
RTN3-202ENST00000339997 Q8N1X5 172 aa5.61□□□□□ -1.51
RTN3-202ENST00000339997 SMR3BP02814 79 aaPredicted RBP5.6□□□□□ -1.51
RTN3-202ENST00000339997 LINC00304Q8N9R0 145 aa5.59□□□□□ -1.51
RTN3-202ENST00000339997 Q8NDZ9 215 aa5.59□□□□□ -1.51
RTN3-202ENST00000339997 CD164Q04900 197 aa5.59□□□□□ -1.52
RTN3-202ENST00000339997 LCA10Q71F78 164 aa5.58□□□□□ -1.52
RTN3-202ENST00000339997 A0A1B0GVX0 72 aa5.58□□□□□ -1.52
RTN3-202ENST00000339997 OCR1Q9BZK8 76 aa5.58□□□□□ -1.52
RTN3-202ENST00000339997 ITPR2Q14571 2701 aa5.57□□□□□ -1.52
RTN3-202ENST00000339997 Q1T7F1 81 aa5.57□□□□□ -1.52
RTN3-202ENST00000339997 FP248Q71RG6 208 aaPredicted RBP5.56□□□□□ -1.52
RTN3-202ENST00000339997 NF1P21359 2839 aa5.56□□□□□ -1.52
RTN3-202ENST00000339997 TLX1NBP0CAT3 122 aa5.56□□□□□ -1.52
RTN3-202ENST00000339997 PRAC1Q96KF2 57 aa5.56□□□□□ -1.52
RTN3-202ENST00000339997 Q5XG85 94 aa5.56□□□□□ -1.52
RTN3-202ENST00000339997 APCP25054 2843 aa5.55□□□□□ -1.52
RTN3-202ENST00000339997 K7EIL1 84 aa5.54□□□□□ -1.52
RTN3-202ENST00000339997 C9orf163Q8N9P6 203 aa5.54□□□□□ -1.52
RTN3-202ENST00000339997 OTOGQ6ZRI0 2925 aa5.54□□□□□ -1.52
RTN3-202ENST00000339997 DNAH10Q8IVF4 4471 aa5.54□□□□□ -1.52
RTN3-202ENST00000339997 OXTP01178 125 aa5.54□□□□□ -1.52
RTN3-202ENST00000339997 PSORS1C2Q9UIG4 136 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms