RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 PRR15LQ9BU68 103 aa6□□□□□ -1.45
NECAP1-201ENST00000339754 KRTAP29-1A8MX34 341 aaPredicted RBP5.99□□□□□ -1.45
NECAP1-201ENST00000339754 MRPL55Q7Z7F7 128 aaKnown RBP5.99□□□□□ -1.45
NECAP1-201ENST00000339754 IGKV2D-24A0A075B6R9 120 aa5.99□□□□□ -1.45
NECAP1-201ENST00000339754 ATP11AUNQ6ZP68 121 aa5.99□□□□□ -1.45
NECAP1-201ENST00000339754 PLA2G2DQ9UNK4 145 aa5.99□□□□□ -1.45
NECAP1-201ENST00000339754 LINC00476Q8WZB0 136 aa5.98□□□□□ -1.45
NECAP1-201ENST00000339754 FAM168BA1KXE4 195 aa5.98□□□□□ -1.45
NECAP1-201ENST00000339754 APOC4P55056 127 aa5.98□□□□□ -1.45
NECAP1-201ENST00000339754 SPTSSBQ8NFR3 76 aa5.98□□□□□ -1.45
NECAP1-201ENST00000339754 Q75L30 129 aa5.97□□□□□ -1.45
NECAP1-201ENST00000339754 KRTAP7-1Q8IUC3 87 aa5.97□□□□□ -1.45
NECAP1-201ENST00000339754 LOC101927531A0A1B0GV80 90 aa5.97□□□□□ -1.45
NECAP1-201ENST00000339754 A6NN06 94 aa5.97□□□□□ -1.45
NECAP1-201ENST00000339754 H0Y9P7 68 aa5.97□□□□□ -1.45
NECAP1-201ENST00000339754 C9orf163Q8N9P6 203 aa5.97□□□□□ -1.45
NECAP1-201ENST00000339754 IGLV5-37A0A075B6J1 123 aa5.96□□□□□ -1.46
NECAP1-201ENST00000339754 H3BPC8 53 aa5.96□□□□□ -1.46
NECAP1-201ENST00000339754 IGFL1Q6UW32 110 aa5.96□□□□□ -1.46
NECAP1-201ENST00000339754 TLX1NBP0CAT3 122 aa5.96□□□□□ -1.46
NECAP1-201ENST00000339754 RPL37AP61513 92 aaKnown RBP5.96□□□□□ -1.46
NECAP1-201ENST00000339754 PHF5AQ7RTV0 110 aaKnown RBP5.96□□□□□ -1.46
NECAP1-201ENST00000339754 C4orf48Q5BLP8 95 aa5.95□□□□□ -1.46
NECAP1-201ENST00000339754 ATRQ13535 2644 aa5.95□□□□□ -1.46
NECAP1-201ENST00000339754 FLNBO75369 2602 aaKnown RBP5.95□□□□□ -1.46
NECAP1-201ENST00000339754 TRRAPQ9Y4A5 3859 aa5.94□□□□□ -1.46
NECAP1-201ENST00000339754 TEP1Q99973 2627 aaKnown RBP5.94□□□□□ -1.46
NECAP1-201ENST00000339754 NDUFS5O43920 106 aa5.94□□□□□ -1.46
NECAP1-201ENST00000339754 A6NED7 52 aa5.93□□□□□ -1.46
NECAP1-201ENST00000339754 A0A087WSZ3 146 aa5.93□□□□□ -1.46
NECAP1-201ENST00000339754 CNBPP62633 177 aaKnown RBP5.92□□□□□ -1.46
NECAP1-201ENST00000339754 CASC2Q6XLA1 102 aa5.92□□□□□ -1.46
NECAP1-201ENST00000339754 COA5Q86WW8 74 aa5.92□□□□□ -1.46
NECAP1-201ENST00000339754 F8P00451 2351 aa5.92□□□□□ -1.46
NECAP1-201ENST00000339754 H3BNG1 76 aa5.91□□□□□ -1.46
NECAP1-201ENST00000339754 CDC42SE1Q9NRR8 79 aa5.91□□□□□ -1.46
NECAP1-201ENST00000339754 IGLV8-61A0A075B6I0 122 aa5.91□□□□□ -1.46
NECAP1-201ENST00000339754 IGLV7-46A0A075B6I9 117 aa5.91□□□□□ -1.46
NECAP1-201ENST00000339754 LINC01556Q5JQF7 62 aa5.89□□□□□ -1.47
NECAP1-201ENST00000339754 PLAC8Q9NZF1 115 aa5.89□□□□□ -1.47
NECAP1-201ENST00000339754 MOBPQ13875 183 aa5.88□□□□□ -1.47
NECAP1-201ENST00000339754 KRTAP24-1Q3LI83 254 aa5.88□□□□□ -1.47
NECAP1-201ENST00000339754 REG3GQ6UW15 175 aa5.88□□□□□ -1.47
NECAP1-201ENST00000339754 PKD1L1Q8TDX9 2849 aa5.88□□□□□ -1.47
NECAP1-201ENST00000339754 FBN1P35555 2871 aaKnown RBP5.87□□□□□ -1.47
NECAP1-201ENST00000339754 LINC01558Q9Y6Z2 57 aa5.87□□□□□ -1.47
NECAP1-201ENST00000339754 OXLD1Q5BKU9 147 aa5.87□□□□□ -1.47
NECAP1-201ENST00000339754 A8MWP4 228 aa5.86□□□□□ -1.47
NECAP1-201ENST00000339754 C7orf65Q6ZTY9 151 aa5.86□□□□□ -1.47
NECAP1-201ENST00000339754 LINC00472Q9H8W2 130 aa5.86□□□□□ -1.47
NECAP1-201ENST00000339754 CASC10Q5T4H9 136 aa5.85□□□□□ -1.47
NECAP1-201ENST00000339754 SPAG11AQ6PDA7 123 aa5.85□□□□□ -1.47
NECAP1-201ENST00000339754 KRTAP10-11P60412 298 aa5.84□□□□□ -1.47
NECAP1-201ENST00000339754 SPINK7P58062 85 aa5.83□□□□□ -1.48
NECAP1-201ENST00000339754 PRLHP81277 87 aa5.83□□□□□ -1.48
NECAP1-201ENST00000339754 MMP24-AS1A0A0U1RRL7 71 aa5.83□□□□□ -1.48
NECAP1-201ENST00000339754 DNAH10OSP0CZ25 163 aa5.82□□□□□ -1.48
NECAP1-201ENST00000339754 PCOTHQ58A44 107 aa5.82□□□□□ -1.48
NECAP1-201ENST00000339754 CMYA5Q8N3K9 4069 aa5.82□□□□□ -1.48
NECAP1-201ENST00000339754 STAB1Q9NY15 2570 aa5.81□□□□□ -1.48
NECAP1-201ENST00000339754 HRES1P13985 223 aa5.79□□□□□ -1.48
NECAP1-201ENST00000339754 ASB16-AS1Q495Z4 193 aa5.79□□□□□ -1.48
NECAP1-201ENST00000339754 C11orf45Q8TAV5 145 aa5.79□□□□□ -1.48
NECAP1-201ENST00000339754 ANK2Q01484 3957 aa5.78□□□□□ -1.48
NECAP1-201ENST00000339754 H0Y9J4 135 aa5.78□□□□□ -1.48
NECAP1-201ENST00000339754 TENM2Q9NT68 2774 aa5.78□□□□□ -1.48
NECAP1-201ENST00000339754 SPRR1BP22528 89 aa5.77□□□□□ -1.49
NECAP1-201ENST00000339754 Q6ZR54 194 aa5.77□□□□□ -1.49
NECAP1-201ENST00000339754 MAST4O15021 2626 aa5.77□□□□□ -1.49
NECAP1-201ENST00000339754 SRRM2Q9UQ35 2752 aaKnown RBP5.77□□□□□ -1.49
NECAP1-201ENST00000339754 DEFB131BA0A096LNP1 70 aa5.76□□□□□ -1.49
NECAP1-201ENST00000339754 IGKV2-24A0A0C4DH68 120 aa5.76□□□□□ -1.49
NECAP1-201ENST00000339754 C8orf87E5RJ46 101 aa5.76□□□□□ -1.49
NECAP1-201ENST00000339754 TP53AIP1Q9HCN2 124 aa5.76□□□□□ -1.49
NECAP1-201ENST00000339754 DNAH1Q9P2D7 4330 aa5.76□□□□□ -1.49
NECAP1-201ENST00000339754 A0A096LNI7 61 aa5.74□□□□□ -1.49
NECAP1-201ENST00000339754 KRTAP11-1Q8IUC1 163 aa5.74□□□□□ -1.49
NECAP1-201ENST00000339754 LINC00313P59037 77 aa5.73□□□□□ -1.49
NECAP1-201ENST00000339754 Q96NJ1 140 aa5.73□□□□□ -1.49
NECAP1-201ENST00000339754 COL6A5A8TX70 2615 aa5.73□□□□□ -1.49
NECAP1-201ENST00000339754 DNAH3Q8TD57 4116 aa5.73□□□□□ -1.49
NECAP1-201ENST00000339754 TENM3Q9P273 2699 aa5.72□□□□□ -1.49
NECAP1-201ENST00000339754 PRAC1Q96KF2 57 aa5.71□□□□□ -1.49
NECAP1-201ENST00000339754 C8orf17Q9NRJ1 99 aa5.71□□□□□ -1.5
NECAP1-201ENST00000339754 PRR26Q8N8Z3 221 aa5.7□□□□□ -1.5
NECAP1-201ENST00000339754 NOTCH1P46531 2555 aa5.7□□□□□ -1.5
NECAP1-201ENST00000339754 ADM2Q7Z4H4 148 aa5.68□□□□□ -1.5
NECAP1-201ENST00000339754 PLA2G1BP04054 148 aaKnown RBP5.67□□□□□ -1.5
NECAP1-201ENST00000339754 KRTAP4-8Q9BYQ9 185 aa5.67□□□□□ -1.5
NECAP1-201ENST00000339754 KRTAP21-3Q3LHN1 58 aa5.66□□□□□ -1.5
NECAP1-201ENST00000339754 K7EIL1 84 aa5.66□□□□□ -1.5
NECAP1-201ENST00000339754 NBEAL1Q6ZS30 2694 aa5.66□□□□□ -1.5
NECAP1-201ENST00000339754 IGHV6-1A0A0B4J1U7 121 aa5.65□□□□□ -1.51
NECAP1-201ENST00000339754 A0A1B0GVX0 72 aa5.65□□□□□ -1.51
NECAP1-201ENST00000339754 MRPL34Q9BQ48 92 aaKnown RBP5.65□□□□□ -1.51
NECAP1-201ENST00000339754 ALMS1Q8TCU4 4167 aa5.65□□□□□ -1.51
NECAP1-201ENST00000339754 CSMD3Q7Z407 3707 aa5.65□□□□□ -1.51
NECAP1-201ENST00000339754 CHTF8P0CG12 524 aa5.64□□□□□ -1.51
NECAP1-201ENST00000339754 A0A087X002 238 aa5.64□□□□□ -1.51
NECAP1-201ENST00000339754 NOTCH2NLQ7Z3S9 236 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms