RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 MAPK1IP1LQ8NDC0 245 aa6.12□□□□□ -1.43
PTCHD4-201ENST00000339488 CAMK2N2Q96S95 79 aa6.12□□□□□ -1.43
PTCHD4-201ENST00000339488 ZNF702PQ9H963 129 aa6.12□□□□□ -1.43
PTCHD4-201ENST00000339488 HIVEP1P15822 2718 aa6.12□□□□□ -1.43
PTCHD4-201ENST00000339488 KRTAP29-1A8MX34 341 aaPredicted RBP6.11□□□□□ -1.43
PTCHD4-201ENST00000339488 HRES1P13985 223 aa6.11□□□□□ -1.43
PTCHD4-201ENST00000339488 SPRR4Q96PI1 79 aa6.11□□□□□ -1.43
PTCHD4-201ENST00000339488 TEP1Q99973 2627 aaKnown RBP6.11□□□□□ -1.43
PTCHD4-201ENST00000339488 SRRM2Q9UQ35 2752 aaKnown RBP6.11□□□□□ -1.43
PTCHD4-201ENST00000339488 C1orf134Q5TEV5 83 aa6.1□□□□□ -1.43
PTCHD4-201ENST00000339488 RTL8CO15255 209 aa6.09□□□□□ -1.43
PTCHD4-201ENST00000339488 CNBPP62633 177 aaKnown RBP6.09□□□□□ -1.43
PTCHD4-201ENST00000339488 KRTAP1-3Q8IUG1 177 aa6.09□□□□□ -1.43
PTCHD4-201ENST00000339488 IGLV5-37A0A075B6J1 123 aa6.08□□□□□ -1.44
PTCHD4-201ENST00000339488 DEFB113Q30KQ7 82 aa6.08□□□□□ -1.44
PTCHD4-201ENST00000339488 ANK3Q12955 4377 aaKnown RBP6.07□□□□□ -1.44
PTCHD4-201ENST00000339488 HTN3P15516 51 aa6.06□□□□□ -1.44
PTCHD4-201ENST00000339488 FAM168BA1KXE4 195 aa6.06□□□□□ -1.44
PTCHD4-201ENST00000339488 MSMBP08118 114 aa6.05□□□□□ -1.44
PTCHD4-201ENST00000339488 IGFL1Q6UW32 110 aa6.05□□□□□ -1.44
PTCHD4-201ENST00000339488 NSD1Q96L73 2696 aaPredicted RBP6.05□□□□□ -1.44
PTCHD4-201ENST00000339488 GVQW2A0A096LPI5 108 aaPredicted RBP6.05□□□□□ -1.44
PTCHD4-201ENST00000339488 PRO0255Q9UI72 69 aa6.05□□□□□ -1.44
PTCHD4-201ENST00000339488 Q6ZRX8 168 aa6.04□□□□□ -1.44
PTCHD4-201ENST00000339488 TRRAPQ9Y4A5 3859 aa6.04□□□□□ -1.44
PTCHD4-201ENST00000339488 H3BPC8 53 aa6.04□□□□□ -1.44
PTCHD4-201ENST00000339488 H0Y9J4 135 aa6.03□□□□□ -1.44
PTCHD4-201ENST00000339488 C4orf3Q8WVX3 66 aa6.01□□□□□ -1.45
PTCHD4-201ENST00000339488 A0A1B0GW54 56 aa6□□□□□ -1.45
PTCHD4-201ENST00000339488 SMR3AQ99954 134 aa6□□□□□ -1.45
PTCHD4-201ENST00000339488 HIVEP2P31629 2446 aa6□□□□□ -1.45
PTCHD4-201ENST00000339488 TENM2Q9NT68 2774 aa6□□□□□ -1.45
PTCHD4-201ENST00000339488 EGFEM1PQ0D2K5 195 aa6□□□□□ -1.45
PTCHD4-201ENST00000339488 DHRS4-AS1Q9P1J3 65 aa6□□□□□ -1.45
PTCHD4-201ENST00000339488 PKD1L1Q8TDX9 2849 aa5.99□□□□□ -1.45
PTCHD4-201ENST00000339488 A0A096LNI7 61 aa5.99□□□□□ -1.45
PTCHD4-201ENST00000339488 FBN1P35555 2871 aaKnown RBP5.98□□□□□ -1.45
PTCHD4-201ENST00000339488 KRTAP1-1Q07627 177 aa5.98□□□□□ -1.45
PTCHD4-201ENST00000339488 C15orf56Q8N910 161 aa5.97□□□□□ -1.45
PTCHD4-201ENST00000339488 IGKV2-24A0A0C4DH68 120 aa5.97□□□□□ -1.45
PTCHD4-201ENST00000339488 MMP24-AS1A0A0U1RRL7 71 aa5.96□□□□□ -1.45
PTCHD4-201ENST00000339488 K7EIL1 84 aa5.96□□□□□ -1.45
PTCHD4-201ENST00000339488 OXLD1Q5BKU9 147 aa5.96□□□□□ -1.45
PTCHD4-201ENST00000339488 KRTAP4-16G5E9R7 235 aaPredicted RBP5.96□□□□□ -1.46
PTCHD4-201ENST00000339488 C19orf73Q9NVV2 129 aa5.96□□□□□ -1.46
PTCHD4-201ENST00000339488 FLG2Q5D862 2391 aaPredicted RBP5.96□□□□□ -1.46
PTCHD4-201ENST00000339488 IGLV8-61A0A075B6I0 122 aa5.96□□□□□ -1.46
PTCHD4-201ENST00000339488 ROMO1P60602 79 aa5.96□□□□□ -1.46
PTCHD4-201ENST00000339488 PRR34Q9NV39 138 aa5.96□□□□□ -1.46
PTCHD4-201ENST00000339488 A8MWP4 228 aa5.95□□□□□ -1.46
PTCHD4-201ENST00000339488 PRLHP81277 87 aa5.95□□□□□ -1.46
PTCHD4-201ENST00000339488 MIR22HGQ0VDD5 57 aa5.94□□□□□ -1.46
PTCHD4-201ENST00000339488 LELP1Q5T871 98 aa5.94□□□□□ -1.46
PTCHD4-201ENST00000339488 ATRQ13535 2644 aa5.94□□□□□ -1.46
PTCHD4-201ENST00000339488 REG3GQ6UW15 175 aa5.93□□□□□ -1.46
PTCHD4-201ENST00000339488 A0A1B0GU69 56 aa5.93□□□□□ -1.46
PTCHD4-201ENST00000339488 X6R8D5 127 aa5.93□□□□□ -1.46
PTCHD4-201ENST00000339488 INAFM1C9JVW0 142 aa5.92□□□□□ -1.46
PTCHD4-201ENST00000339488 VWFP04275 2813 aa5.92□□□□□ -1.46
PTCHD4-201ENST00000339488 SPATA8Q6RVD6 105 aa5.92□□□□□ -1.46
PTCHD4-201ENST00000339488 KRTAP7-1Q8IUC3 87 aa5.92□□□□□ -1.46
PTCHD4-201ENST00000339488 A0A0A0MQY5 61 aa5.91□□□□□ -1.46
PTCHD4-201ENST00000339488 CRIPTQ9P021 101 aa5.91□□□□□ -1.46
PTCHD4-201ENST00000339488 TENM1Q9UKZ4 2725 aa5.91□□□□□ -1.46
PTCHD4-201ENST00000339488 COL7A1Q02388 2944 aa5.91□□□□□ -1.46
PTCHD4-201ENST00000339488 DEFB135Q30KP9 77 aa5.91□□□□□ -1.46
PTCHD4-201ENST00000339488 P0C880 135 aa5.9□□□□□ -1.46
PTCHD4-201ENST00000339488 Q6YL49 198 aa5.89□□□□□ -1.47
PTCHD4-201ENST00000339488 LINC00472Q9H8W2 130 aa5.89□□□□□ -1.47
PTCHD4-201ENST00000339488 ALMS1Q8TCU4 4167 aa5.89□□□□□ -1.47
PTCHD4-201ENST00000339488 IGHV6-1A0A0B4J1U7 121 aa5.89□□□□□ -1.47
PTCHD4-201ENST00000339488 ZNF861PO60384 105 aa5.89□□□□□ -1.47
PTCHD4-201ENST00000339488 ASB16-AS1Q495Z4 193 aa5.88□□□□□ -1.47
PTCHD4-201ENST00000339488 KRTAP26-1Q6PEX3 210 aa5.88□□□□□ -1.47
PTCHD4-201ENST00000339488 SPRR1AP35321 89 aa5.87□□□□□ -1.47
PTCHD4-201ENST00000339488 UQCR11O14957 56 aa5.84□□□□□ -1.47
PTCHD4-201ENST00000339488 STAB1Q9NY15 2570 aa5.84□□□□□ -1.47
PTCHD4-201ENST00000339488 DEFB131BA0A096LNP1 70 aa5.84□□□□□ -1.48
PTCHD4-201ENST00000339488 DNAH10OSP0CZ25 163 aa5.84□□□□□ -1.48
PTCHD4-201ENST00000339488 COL6A5A8TX70 2615 aa5.84□□□□□ -1.48
PTCHD4-201ENST00000339488 A0A087X002 238 aa5.83□□□□□ -1.48
PTCHD4-201ENST00000339488 NOTCH2NLQ7Z3S9 236 aa5.83□□□□□ -1.48
PTCHD4-201ENST00000339488 KRTAP25-1Q3LHN0 102 aa5.82□□□□□ -1.48
PTCHD4-201ENST00000339488 CASC10Q5T4H9 136 aa5.82□□□□□ -1.48
PTCHD4-201ENST00000339488 C8orf17Q9NRJ1 99 aa5.81□□□□□ -1.48
PTCHD4-201ENST00000339488 Q5W150 140 aa5.8□□□□□ -1.48
PTCHD4-201ENST00000339488 TP53AIP1Q9HCN2 124 aa5.79□□□□□ -1.48
PTCHD4-201ENST00000339488 A8MUU9 505 aa5.79□□□□□ -1.48
PTCHD4-201ENST00000339488 ACYP2P14621 99 aa5.79□□□□□ -1.48
PTCHD4-201ENST00000339488 NBEAL1Q6ZS30 2694 aa5.79□□□□□ -1.48
PTCHD4-201ENST00000339488 IGLV5-52A0A0A0MRZ9 124 aa5.77□□□□□ -1.49
PTCHD4-201ENST00000339488 CMC4P56277 68 aaPredicted RBP5.77□□□□□ -1.49
PTCHD4-201ENST00000339488 Q96NJ1 140 aa5.76□□□□□ -1.49
PTCHD4-201ENST00000339488 KRTAP11-1Q8IUC1 163 aa5.74□□□□□ -1.49
PTCHD4-201ENST00000339488 MRPL34Q9BQ48 92 aaKnown RBP5.74□□□□□ -1.49
PTCHD4-201ENST00000339488 IGLV9-49A0A0B4J1Y8 123 aa5.73□□□□□ -1.49
PTCHD4-201ENST00000339488 DMAC1Q96GE9 116 aa5.73□□□□□ -1.49
PTCHD4-201ENST00000339488 NDUFAF8A1L188 74 aa5.72□□□□□ -1.49
PTCHD4-201ENST00000339488 DNHD1Q96M86 4753 aa5.72□□□□□ -1.49
PTCHD4-201ENST00000339488 LINC00483Q53H64 154 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms