RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 DEFB105AQ8NG35 78 aa10.75□□□□□ -0.69
ITGA4-202ENST00000339307 LIMD2Q9BT23 127 aa10.75□□□□□ -0.69
ITGA4-202ENST00000339307 COX7BP24311 80 aa10.74□□□□□ -0.69
ITGA4-202ENST00000339307 VAMP3Q15836 100 aa10.74□□□□□ -0.69
ITGA4-202ENST00000339307 PRO1854Q9UHT4 67 aa10.72□□□□□ -0.69
ITGA4-202ENST00000339307 SPRR1BP22528 89 aa10.71□□□□□ -0.69
ITGA4-202ENST00000339307 Q1RN00 199 aa10.71□□□□□ -0.69
ITGA4-202ENST00000339307 C9orf92A6NGG3 77 aa10.69□□□□□ -0.7
ITGA4-202ENST00000339307 BVES-AS1Q5T3Y7 98 aa10.69□□□□□ -0.7
ITGA4-202ENST00000339307 KRTAP9-6A0A140TA67 174 aa10.68□□□□□ -0.7
ITGA4-202ENST00000339307 M0R143 59 aa10.68□□□□□ -0.7
ITGA4-202ENST00000339307 NHP2Q9NX24 153 aaKnown RBP10.68□□□□□ -0.7
ITGA4-202ENST00000339307 H7C2G1 150 aa10.66□□□□□ -0.7
ITGA4-202ENST00000339307 TEX49A0A1B0GTD5 131 aa10.64□□□□□ -0.71
ITGA4-202ENST00000339307 H0YGX0 51 aa10.63□□□□□ -0.71
ITGA4-202ENST00000339307 PCOTHQ58A44 107 aa10.63□□□□□ -0.71
ITGA4-202ENST00000339307 IGLV8-61A0A075B6I0 122 aa10.61□□□□□ -0.71
ITGA4-202ENST00000339307 LINC00575Q6W349 94 aa10.61□□□□□ -0.71
ITGA4-202ENST00000339307 SNCGO76070 127 aa10.6□□□□□ -0.71
ITGA4-202ENST00000339307 CD164Q04900 197 aa10.59□□□□□ -0.71
ITGA4-202ENST00000339307 hADV29S1A0JD25 119 aa10.58□□□□□ -0.72
ITGA4-202ENST00000339307 K7ERJ3 54 aa10.58□□□□□ -0.72
ITGA4-202ENST00000339307 A0A0G2JQZ4 141 aa10.57□□□□□ -0.72
ITGA4-202ENST00000339307 A0A1B0GX51 115 aa10.57□□□□□ -0.72
ITGA4-202ENST00000339307 COX6CP09669 75 aa10.57□□□□□ -0.72
ITGA4-202ENST00000339307 IGLV5-48A0A075B6I7 105 aa10.55□□□□□ -0.72
ITGA4-202ENST00000339307 SMIM29Q86T20 159 aa10.55□□□□□ -0.72
ITGA4-202ENST00000339307 TRIAP1O43715 76 aa10.54□□□□□ -0.72
ITGA4-202ENST00000339307 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.54□□□□□ -0.72
ITGA4-202ENST00000339307 PSMB2P49721 201 aa10.53□□□□□ -0.72
ITGA4-202ENST00000339307 OCIAD2Q56VL3 154 aa10.51□□□□□ -0.73
ITGA4-202ENST00000339307 LCE2CQ5TA81 110 aa10.51□□□□□ -0.73
ITGA4-202ENST00000339307 C1orf195Q5TG92 126 aa10.51□□□□□ -0.73
ITGA4-202ENST00000339307 PPDPFLQ8WWR9 84 aa10.51□□□□□ -0.73
ITGA4-202ENST00000339307 GHRHP01286 108 aa10.5□□□□□ -0.73
ITGA4-202ENST00000339307 LCE2DQ5TA82 110 aaPredicted RBP10.5□□□□□ -0.73
ITGA4-202ENST00000339307 Q6ZQY7 126 aa10.5□□□□□ -0.73
ITGA4-202ENST00000339307 Q5XG85 94 aa10.49□□□□□ -0.73
ITGA4-202ENST00000339307 F8WEM9 126 aa10.47□□□□□ -0.73
ITGA4-202ENST00000339307 FAM218AQ96MZ4 157 aa10.47□□□□□ -0.73
ITGA4-202ENST00000339307 TCL1BO95988 128 aa10.46□□□□□ -0.74
ITGA4-202ENST00000339307 SCGB1C2P0DMR2 95 aa10.45□□□□□ -0.74
ITGA4-202ENST00000339307 BATFQ16520 125 aa10.45□□□□□ -0.74
ITGA4-202ENST00000339307 KRTAP19-2Q3LHN2 52 aa10.45□□□□□ -0.74
ITGA4-202ENST00000339307 H3BQ85 93 aa10.44□□□□□ -0.74
ITGA4-202ENST00000339307 MT1HP80294 61 aa10.44□□□□□ -0.74
ITGA4-202ENST00000339307 DNAL4O96015 105 aa10.42□□□□□ -0.74
ITGA4-202ENST00000339307 LYRM7Q5U5X0 104 aa10.42□□□□□ -0.74
ITGA4-202ENST00000339307 CLEC2BQ92478 149 aa10.42□□□□□ -0.74
ITGA4-202ENST00000339307 TRACP01848 142 aa10.41□□□□□ -0.74
ITGA4-202ENST00000339307 RPL37P61927 97 aaKnown RBP10.41□□□□□ -0.74
ITGA4-202ENST00000339307 FSIP2Q5CZC0 6907 aa10.39□□□□□ -0.75
ITGA4-202ENST00000339307 LST1O00453 97 aa10.39□□□□□ -0.75
ITGA4-202ENST00000339307 SNHG12Q9BXW3 62 aa10.39□□□□□ -0.75
ITGA4-202ENST00000339307 M0R2T5 61 aa10.38□□□□□ -0.75
ITGA4-202ENST00000339307 COX6B2Q6YFQ2 88 aa10.38□□□□□ -0.75
ITGA4-202ENST00000339307 C9orf118A6NHY6 69 aa10.36□□□□□ -0.75
ITGA4-202ENST00000339307 ORMDL1Q9P0S3 153 aa10.36□□□□□ -0.75
ITGA4-202ENST00000339307 CRCT1Q9UGL9 99 aa10.35□□□□□ -0.75
ITGA4-202ENST00000339307 TRBV20-1A0A075B6N2 111 aa10.34□□□□□ -0.75
ITGA4-202ENST00000339307 TMEM256-PLSCR3K7ERE1 68 aa10.34□□□□□ -0.75
ITGA4-202ENST00000339307 TAX1BP3O14907 124 aa10.34□□□□□ -0.75
ITGA4-202ENST00000339307 ATXN8Q156A1 80 aa10.34□□□□□ -0.75
ITGA4-202ENST00000339307 COL5A1-AS1Q5SY13 56 aa10.34□□□□□ -0.75
ITGA4-202ENST00000339307 Q6JHZ5 121 aa10.34□□□□□ -0.75
ITGA4-202ENST00000339307 H3BUT2 72 aa10.33□□□□□ -0.76
ITGA4-202ENST00000339307 NAA38Q9BRA0 125 aaKnown RBP10.33□□□□□ -0.76
ITGA4-202ENST00000339307 PCP4L1A6NKN8 68 aa10.32□□□□□ -0.76
ITGA4-202ENST00000339307 FABP2P12104 132 aa10.31□□□□□ -0.76
ITGA4-202ENST00000339307 NDUFV3P56181 108 aaKnown RBP10.31□□□□□ -0.76
ITGA4-202ENST00000339307 IGFL1Q6UW32 110 aa10.31□□□□□ -0.76
ITGA4-202ENST00000339307 TRBV7-7A0A0K0K1E9 115 aa10.3□□□□□ -0.76
ITGA4-202ENST00000339307 UBE2V1Q13404 147 aa10.29□□□□□ -0.76
ITGA4-202ENST00000339307 A0A1W2PPM0 123 aa10.28□□□□□ -0.76
ITGA4-202ENST00000339307 KRTAP10-6P60371 365 aaPredicted RBP10.28□□□□□ -0.76
ITGA4-202ENST00000339307 OBSCN-AS1Q96MR7 158 aa10.26□□□□□ -0.77
ITGA4-202ENST00000339307 ATP11AUNQ6ZP68 121 aa10.25□□□□□ -0.77
ITGA4-202ENST00000339307 H3BMG7 143 aa10.24□□□□□ -0.77
ITGA4-202ENST00000339307 LORP23490 312 aaPredicted RBP10.24□□□□□ -0.77
ITGA4-202ENST00000339307 Q6Q795 121 aa10.24□□□□□ -0.77
ITGA4-202ENST00000339307 BAALC-AS2P0C853 105 aa10.24□□□□□ -0.77
ITGA4-202ENST00000339307 ANKRD29Q8N6D5 301 aa10.19□□□□□ -0.78
ITGA4-202ENST00000339307 Q96NJ1 140 aa10.18□□□□□ -0.78
ITGA4-202ENST00000339307 TEN1Q86WV5 123 aa10.17□□□□□ -0.78
ITGA4-202ENST00000339307 C9JAW5 83 aa10.16□□□□□ -0.78
ITGA4-202ENST00000339307 Q75L30 129 aa10.16□□□□□ -0.78
ITGA4-202ENST00000339307 SPCS1Q9Y6A9 102 aa10.16□□□□□ -0.78
ITGA4-202ENST00000339307 RBM3P98179 157 aaKnown RBP10.16□□□□□ -0.78
ITGA4-202ENST00000339307 JMJD7-PLA2G4BH0Y9G9 81 aa10.15□□□□□ -0.79
ITGA4-202ENST00000339307 H3BT86 120 aa10.15□□□□□ -0.79
ITGA4-202ENST00000339307 SS18L2Q9UHA2 77 aa10.14□□□□□ -0.79
ITGA4-202ENST00000339307 TRBV7-4A0A0J9YYF1 115 aa10.12□□□□□ -0.79
ITGA4-202ENST00000339307 DSCR8Q96T75 97 aa10.12□□□□□ -0.79
ITGA4-202ENST00000339307 K7EP34 96 aa10.09□□□□□ -0.79
ITGA4-202ENST00000339307 PDE6GP18545 87 aa10.08□□□□□ -0.8
ITGA4-202ENST00000339307 C21orf62-AS1Q17RA5 79 aa10.08□□□□□ -0.8
ITGA4-202ENST00000339307 GTF2H5Q6ZYL4 71 aa10.08□□□□□ -0.8
ITGA4-202ENST00000339307 A0A087WSZ3 146 aa10.07□□□□□ -0.8
ITGA4-202ENST00000339307 A0A1W2PNM2 257 aa10.07□□□□□ -0.8
ITGA4-202ENST00000339307 CCKP06307 115 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms