RNA–Protein interactions for RNA: ENST00000339251.9

MUC4-202, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,777 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-202ENST00000339251 B9D2Q9BPU9 175 aa7.4□□□□□ -1.22
MUC4-202ENST00000339251 A8MUN3 132 aa7.4□□□□□ -1.22
MUC4-202ENST00000339251 TRAV22A0A0B4J277 110 aa7.39□□□□□ -1.23
MUC4-202ENST00000339251 CASC2Q6XLA1 102 aa7.39□□□□□ -1.23
MUC4-202ENST00000339251 PRR15LQ9BU68 103 aa7.38□□□□□ -1.23
MUC4-202ENST00000339251 CASC10Q5T4H9 136 aa7.37□□□□□ -1.23
MUC4-202ENST00000339251 IGFL1Q6UW32 110 aa7.37□□□□□ -1.23
MUC4-202ENST00000339251 SPRR4Q96PI1 79 aa7.37□□□□□ -1.23
MUC4-202ENST00000339251 Q1T7F1 81 aa7.36□□□□□ -1.23
MUC4-202ENST00000339251 NDUFS5O43920 106 aa7.35□□□□□ -1.23
MUC4-202ENST00000339251 C4orf48Q5BLP8 95 aa7.35□□□□□ -1.23
MUC4-202ENST00000339251 PLA2G2DQ9UNK4 145 aa7.35□□□□□ -1.23
MUC4-202ENST00000339251 TLX1NBP0CAT3 122 aa7.34□□□□□ -1.23
MUC4-202ENST00000339251 UBE2DNLQ8IWF7 75 aa7.34□□□□□ -1.23
MUC4-202ENST00000339251 A6NED7 52 aa7.34□□□□□ -1.24
MUC4-202ENST00000339251 DNAH10OSP0CZ25 163 aa7.33□□□□□ -1.24
MUC4-202ENST00000339251 PRR15Q8IV56 129 aa7.33□□□□□ -1.24
MUC4-202ENST00000339251 TNP2Q05952 138 aa7.33□□□□□ -1.24
MUC4-202ENST00000339251 CDK2AP2O75956 126 aa7.32□□□□□ -1.24
MUC4-202ENST00000339251 PCOTHQ58A44 107 aa7.32□□□□□ -1.24
MUC4-202ENST00000339251 LINC00588Q9Y4M8 146 aa7.32□□□□□ -1.24
MUC4-202ENST00000339251 CYP4F30PQ9H0H9 118 aa7.31□□□□□ -1.24
MUC4-202ENST00000339251 SPRR1AP35321 89 aa7.31□□□□□ -1.24
MUC4-202ENST00000339251 ZCCHC13Q8WW36 166 aaKnown RBP7.3□□□□□ -1.24
MUC4-202ENST00000339251 IGLV5-37A0A075B6J1 123 aa7.3□□□□□ -1.24
MUC4-202ENST00000339251 KRTAP24-1Q3LI83 254 aa7.3□□□□□ -1.24
MUC4-202ENST00000339251 LIMD2Q9BT23 127 aa7.3□□□□□ -1.24
MUC4-202ENST00000339251 KRTAP4-16G5E9R7 235 aaPredicted RBP7.29□□□□□ -1.24
MUC4-202ENST00000339251 KRTAP10-11P60412 298 aa7.29□□□□□ -1.24
MUC4-202ENST00000339251 LCE6AA0A183 80 aa7.28□□□□□ -1.24
MUC4-202ENST00000339251 H3BPC8 53 aa7.26□□□□□ -1.25
MUC4-202ENST00000339251 IGLV9-49A0A0B4J1Y8 123 aa7.25□□□□□ -1.25
MUC4-202ENST00000339251 PHF5AQ7RTV0 110 aaKnown RBP7.25□□□□□ -1.25
MUC4-202ENST00000339251 A8MWP4 228 aa7.24□□□□□ -1.25
MUC4-202ENST00000339251 CD164Q04900 197 aa7.24□□□□□ -1.25
MUC4-202ENST00000339251 CHTF8P0CG12 524 aa7.23□□□□□ -1.25
MUC4-202ENST00000339251 COA5Q86WW8 74 aa7.22□□□□□ -1.25
MUC4-202ENST00000339251 C16orf90A8MZG2 172 aa7.22□□□□□ -1.25
MUC4-202ENST00000339251 KRTAP7-1Q8IUC3 87 aa7.22□□□□□ -1.25
MUC4-202ENST00000339251 SPANXA2-OT1Q8N9U9 137 aa7.21□□□□□ -1.25
MUC4-202ENST00000339251 MDFIQ99750 246 aa7.21□□□□□ -1.25
MUC4-202ENST00000339251 Q5VV11 94 aa7.21□□□□□ -1.26
MUC4-202ENST00000339251 SPAG11AQ6PDA7 123 aa7.21□□□□□ -1.26
MUC4-202ENST00000339251 CNBPP62633 177 aaKnown RBP7.2□□□□□ -1.26
MUC4-202ENST00000339251 Q8N9P0 234 aaPredicted RBP7.2□□□□□ -1.26
MUC4-202ENST00000339251 C14orf177Q52M58 125 aa7.2□□□□□ -1.26
MUC4-202ENST00000339251 IGHV6-1A0A0B4J1U7 121 aa7.19□□□□□ -1.26
MUC4-202ENST00000339251 A8MU10 97 aa7.17□□□□□ -1.26
MUC4-202ENST00000339251 H3BS24 57 aa7.17□□□□□ -1.26
MUC4-202ENST00000339251 TENM3Q9P273 2699 aa7.17□□□□□ -1.26
MUC4-202ENST00000339251 KRTAP29-1A8MX34 341 aaPredicted RBP7.15□□□□□ -1.26
MUC4-202ENST00000339251 IGLV8-61A0A075B6I0 122 aa7.14□□□□□ -1.27
MUC4-202ENST00000339251 SPINK6Q6UWN8 80 aa7.14□□□□□ -1.27
MUC4-202ENST00000339251 DNHD1Q96M86 4753 aa7.14□□□□□ -1.27
MUC4-202ENST00000339251 TP53AIP1Q9HCN2 124 aa7.14□□□□□ -1.27
MUC4-202ENST00000339251 LOC101927531A0A1B0GV80 90 aa7.13□□□□□ -1.27
MUC4-202ENST00000339251 LINC00472Q9H8W2 130 aa7.12□□□□□ -1.27
MUC4-202ENST00000339251 ATP11AUNQ6ZP68 121 aa7.12□□□□□ -1.27
MUC4-202ENST00000339251 MMP24-AS1A0A0U1RRL7 71 aa7.11□□□□□ -1.27
MUC4-202ENST00000339251 KTN1-AS1Q86SY8 53 aa7.11□□□□□ -1.27
MUC4-202ENST00000339251 IGLV7-46A0A075B6I9 117 aa7.1□□□□□ -1.27
MUC4-202ENST00000339251 MOBPQ13875 183 aa7.09□□□□□ -1.27
MUC4-202ENST00000339251 C8orf17Q9NRJ1 99 aa7.09□□□□□ -1.27
MUC4-202ENST00000339251 Q75L30 129 aa7.09□□□□□ -1.28
MUC4-202ENST00000339251 TGP01266 2768 aa7.08□□□□□ -1.28
MUC4-202ENST00000339251 RBM12B-AS1Q9P1G2 102 aa7.08□□□□□ -1.28
MUC4-202ENST00000339251 C9orf163Q8N9P6 203 aa7.08□□□□□ -1.28
MUC4-202ENST00000339251 STAB2Q8WWQ8 2551 aa7.07□□□□□ -1.28
MUC4-202ENST00000339251 ANK2Q01484 3957 aa7.07□□□□□ -1.28
MUC4-202ENST00000339251 KRTAP11-1Q8IUC1 163 aa7.05□□□□□ -1.28
MUC4-202ENST00000339251 CDC42SE1Q9NRR8 79 aa7.05□□□□□ -1.28
MUC4-202ENST00000339251 SPRR1BP22528 89 aa7.05□□□□□ -1.28
MUC4-202ENST00000339251 LCA10Q71F78 164 aa7.05□□□□□ -1.28
MUC4-202ENST00000339251 KRTAP1-5Q9BYS1 174 aa7.05□□□□□ -1.28
MUC4-202ENST00000339251 ZNF706Q9Y5V0 76 aaPredicted RBP7.05□□□□□ -1.28
MUC4-202ENST00000339251 MRPL34Q9BQ48 92 aaKnown RBP7.04□□□□□ -1.28
MUC4-202ENST00000339251 A0A1B0GVX0 72 aa7.03□□□□□ -1.28
MUC4-202ENST00000339251 ANAPC11Q9NYG5 84 aa7.01□□□□□ -1.29
MUC4-202ENST00000339251 LINC01558Q9Y6Z2 57 aa7.01□□□□□ -1.29
MUC4-202ENST00000339251 RETNLBQ9BQ08 111 aa7□□□□□ -1.29
MUC4-202ENST00000339251 PRR26Q8N8Z3 221 aa7□□□□□ -1.29
MUC4-202ENST00000339251 CIRBP-AS1Q8TBR5 109 aa6.99□□□□□ -1.29
MUC4-202ENST00000339251 K7EIL1 84 aa6.99□□□□□ -1.29
MUC4-202ENST00000339251 HRES1P13985 223 aa6.99□□□□□ -1.29
MUC4-202ENST00000339251 C7orf65Q6ZTY9 151 aa6.99□□□□□ -1.29
MUC4-202ENST00000339251 TENM2Q9NT68 2774 aa6.99□□□□□ -1.29
MUC4-202ENST00000339251 SPINK7P58062 85 aa6.98□□□□□ -1.29
MUC4-202ENST00000339251 SRRM2Q9UQ35 2752 aaKnown RBP6.97□□□□□ -1.29
MUC4-202ENST00000339251 MEGF8Q7Z7M0 2845 aa6.97□□□□□ -1.29
MUC4-202ENST00000339251 ACYP2P14621 99 aa6.96□□□□□ -1.29
MUC4-202ENST00000339251 COL7A1Q02388 2944 aa6.95□□□□□ -1.3
MUC4-202ENST00000339251 NBDYA0A0U1RRE5 68 aa6.94□□□□□ -1.3
MUC4-202ENST00000339251 PANO1I0J062 215 aa6.93□□□□□ -1.3
MUC4-202ENST00000339251 Q6ZR54 194 aa6.93□□□□□ -1.3
MUC4-202ENST00000339251 A0A1B0GU69 56 aa6.92□□□□□ -1.3
MUC4-202ENST00000339251 A6NN06 94 aa6.92□□□□□ -1.3
MUC4-202ENST00000339251 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.92□□□□□ -1.3
MUC4-202ENST00000339251 APLNQ9ULZ1 77 aa6.91□□□□□ -1.3
MUC4-202ENST00000339251 PSORS1C2Q9UIG4 136 aa6.9□□□□□ -1.3
MUC4-202ENST00000339251 CMYA5Q8N3K9 4069 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms