RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 LRCOL1A6NCL2 159 aa11.98□□□□□ -0.49
PSPC1-201ENST00000338910 KRTAP4-16G5E9R7 235 aaPredicted RBP11.98□□□□□ -0.49
PSPC1-201ENST00000338910 CD164Q04900 197 aa11.98□□□□□ -0.49
PSPC1-201ENST00000338910 DNAH10Q8IVF4 4471 aa11.98□□□□□ -0.49
PSPC1-201ENST00000338910 UBE2DNLQ8IWF7 75 aa11.97□□□□□ -0.49
PSPC1-201ENST00000338910 K7EQZ3 153 aa11.97□□□□□ -0.49
PSPC1-201ENST00000338910 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.96□□□□□ -0.5
PSPC1-201ENST00000338910 TLX1NBP0CAT3 122 aa11.95□□□□□ -0.5
PSPC1-201ENST00000338910 ST20-AS1Q8NBB2 130 aa11.95□□□□□ -0.5
PSPC1-201ENST00000338910 PRR15Q8IV56 129 aa11.95□□□□□ -0.5
PSPC1-201ENST00000338910 FAM168BA1KXE4 195 aa11.94□□□□□ -0.5
PSPC1-201ENST00000338910 RPL37AP8A6NKH3 93 aa11.93□□□□□ -0.5
PSPC1-201ENST00000338910 SPRR1AP35321 89 aa11.93□□□□□ -0.5
PSPC1-201ENST00000338910 CYP4F30PQ9H0H9 118 aa11.92□□□□□ -0.5
PSPC1-201ENST00000338910 PLA2G2DQ9UNK4 145 aa11.92□□□□□ -0.5
PSPC1-201ENST00000338910 STARD9Q9P2P6 4700 aa11.92□□□□□ -0.5
PSPC1-201ENST00000338910 IGLV1-50A0A075B6I6 118 aa11.91□□□□□ -0.5
PSPC1-201ENST00000338910 NUPR2A6NF83 97 aa11.9□□□□□ -0.5
PSPC1-201ENST00000338910 HCG22E2RYF7 251 aa11.89□□□□□ -0.51
PSPC1-201ENST00000338910 PSCAO43653 123 aa11.89□□□□□ -0.51
PSPC1-201ENST00000338910 IGLV5-37A0A075B6J1 123 aa11.87□□□□□ -0.51
PSPC1-201ENST00000338910 TRAV22A0A0B4J277 110 aa11.87□□□□□ -0.51
PSPC1-201ENST00000338910 KRTAP7-1Q8IUC3 87 aa11.87□□□□□ -0.51
PSPC1-201ENST00000338910 PRR4Q16378 134 aa11.86□□□□□ -0.51
PSPC1-201ENST00000338910 PSPHP1O15172 72 aa11.85□□□□□ -0.51
PSPC1-201ENST00000338910 FBN3Q75N90 2809 aa11.83□□□□□ -0.52
PSPC1-201ENST00000338910 NDUFB1O75438 58 aa11.82□□□□□ -0.52
PSPC1-201ENST00000338910 LINC00476Q8WZB0 136 aa11.81□□□□□ -0.52
PSPC1-201ENST00000338910 TGP01266 2768 aa11.8□□□□□ -0.52
PSPC1-201ENST00000338910 IGKV2-24A0A0C4DH68 120 aa11.79□□□□□ -0.52
PSPC1-201ENST00000338910 UBE2BP63146 152 aa11.79□□□□□ -0.52
PSPC1-201ENST00000338910 MRPL55Q7Z7F7 128 aaKnown RBP11.79□□□□□ -0.52
PSPC1-201ENST00000338910 A0A096LNI7 61 aa11.78□□□□□ -0.52
PSPC1-201ENST00000338910 NBDYA0A0U1RRE5 68 aa11.78□□□□□ -0.52
PSPC1-201ENST00000338910 A0A0G2JQZ4 141 aa11.77□□□□□ -0.52
PSPC1-201ENST00000338910 A0A1W2PNN7 141 aa11.77□□□□□ -0.52
PSPC1-201ENST00000338910 VPS13DQ5THJ4 4388 aa11.77□□□□□ -0.53
PSPC1-201ENST00000338910 CNBPP62633 177 aaKnown RBP11.77□□□□□ -0.53
PSPC1-201ENST00000338910 IGFL1Q6UW32 110 aa11.76□□□□□ -0.53
PSPC1-201ENST00000338910 WFDC13Q8IUB5 93 aa11.76□□□□□ -0.53
PSPC1-201ENST00000338910 MP68P56378 58 aa11.76□□□□□ -0.53
PSPC1-201ENST00000338910 DEFB116Q30KQ4 102 aa11.75□□□□□ -0.53
PSPC1-201ENST00000338910 A8MUN3 132 aa11.75□□□□□ -0.53
PSPC1-201ENST00000338910 C16orf90A8MZG2 172 aa11.74□□□□□ -0.53
PSPC1-201ENST00000338910 KRTAP21-3Q3LHN1 58 aa11.72□□□□□ -0.53
PSPC1-201ENST00000338910 LINC00208Q96KT6 92 aa11.72□□□□□ -0.53
PSPC1-201ENST00000338910 KRTAP29-1A8MX34 341 aaPredicted RBP11.71□□□□□ -0.53
PSPC1-201ENST00000338910 C14orf177Q52M58 125 aa11.71□□□□□ -0.53
PSPC1-201ENST00000338910 REG3GQ6UW15 175 aa11.71□□□□□ -0.53
PSPC1-201ENST00000338910 KMT2AQ03164 3969 aa11.71□□□□□ -0.54
PSPC1-201ENST00000338910 C4orf48Q5BLP8 95 aa11.7□□□□□ -0.54
PSPC1-201ENST00000338910 A0A087WSZ3 146 aa11.7□□□□□ -0.54
PSPC1-201ENST00000338910 Q5VV11 94 aa11.7□□□□□ -0.54
PSPC1-201ENST00000338910 CHTF8P0CG12 524 aa11.69□□□□□ -0.54
PSPC1-201ENST00000338910 SPANXA2-OT1Q8N9U9 137 aa11.69□□□□□ -0.54
PSPC1-201ENST00000338910 IGLV8-61A0A075B6I0 122 aa11.68□□□□□ -0.54
PSPC1-201ENST00000338910 Q6ZRN7 208 aaPredicted RBP11.68□□□□□ -0.54
PSPC1-201ENST00000338910 RPL37AP61513 92 aaKnown RBP11.67□□□□□ -0.54
PSPC1-201ENST00000338910 A8MU10 97 aa11.66□□□□□ -0.54
PSPC1-201ENST00000338910 H0Y9P7 68 aa11.65□□□□□ -0.55
PSPC1-201ENST00000338910 H3BPC8 53 aa11.65□□□□□ -0.55
PSPC1-201ENST00000338910 Q8N9P0 234 aaPredicted RBP11.64□□□□□ -0.55
PSPC1-201ENST00000338910 C9orf163Q8N9P6 203 aa11.64□□□□□ -0.55
PSPC1-201ENST00000338910 DNAH2Q9P225 4427 aa11.63□□□□□ -0.55
PSPC1-201ENST00000338910 CASC2Q6XLA1 102 aa11.61□□□□□ -0.55
PSPC1-201ENST00000338910 PRLHP81277 87 aa11.61□□□□□ -0.55
PSPC1-201ENST00000338910 PHF5AQ7RTV0 110 aaKnown RBP11.61□□□□□ -0.55
PSPC1-201ENST00000338910 LIMD2Q9BT23 127 aa11.6□□□□□ -0.55
PSPC1-201ENST00000338910 KRTAP11-1Q8IUC1 163 aa11.59□□□□□ -0.55
PSPC1-201ENST00000338910 UBE2AP49459 152 aa11.57□□□□□ -0.56
PSPC1-201ENST00000338910 CHKB-CPT1BH3BT56 60 aa11.56□□□□□ -0.56
PSPC1-201ENST00000338910 PANO1I0J062 215 aa11.56□□□□□ -0.56
PSPC1-201ENST00000338910 Q6ZR54 194 aa11.56□□□□□ -0.56
PSPC1-201ENST00000338910 A8MWP4 228 aa11.55□□□□□ -0.56
PSPC1-201ENST00000338910 LY6G6CO95867 125 aa11.54□□□□□ -0.56
PSPC1-201ENST00000338910 PRR15LQ9BU68 103 aa11.54□□□□□ -0.56
PSPC1-201ENST00000338910 LINC00472Q9H8W2 130 aa11.54□□□□□ -0.56
PSPC1-201ENST00000338910 RBM12B-AS1Q9P1G2 102 aa11.54□□□□□ -0.56
PSPC1-201ENST00000338910 KTN1-AS1Q86SY8 53 aa11.53□□□□□ -0.56
PSPC1-201ENST00000338910 A0A087WTM6 91 aa11.52□□□□□ -0.56
PSPC1-201ENST00000338910 HECTD4Q9Y4D8 3996 aa11.51□□□□□ -0.57
PSPC1-201ENST00000338910 WWC2-AS2Q96NR7 200 aa11.49□□□□□ -0.57
PSPC1-201ENST00000338910 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.49□□□□□ -0.57
PSPC1-201ENST00000338910 Q75L30 129 aa11.48□□□□□ -0.57
PSPC1-201ENST00000338910 SRRM2Q9UQ35 2752 aaKnown RBP11.48□□□□□ -0.57
PSPC1-201ENST00000338910 COA5Q86WW8 74 aa11.48□□□□□ -0.57
PSPC1-201ENST00000338910 LOC101927531A0A1B0GV80 90 aa11.47□□□□□ -0.57
PSPC1-201ENST00000338910 SPRR1BP22528 89 aa11.47□□□□□ -0.57
PSPC1-201ENST00000338910 IGLV7-46A0A075B6I9 117 aa11.47□□□□□ -0.57
PSPC1-201ENST00000338910 C1orf134Q5TEV5 83 aa11.46□□□□□ -0.58
PSPC1-201ENST00000338910 LCA10Q71F78 164 aa11.46□□□□□ -0.58
PSPC1-201ENST00000338910 MMP24-AS1A0A0U1RRL7 71 aa11.45□□□□□ -0.58
PSPC1-201ENST00000338910 SPACA4Q8TDM5 124 aa11.44□□□□□ -0.58
PSPC1-201ENST00000338910 RTL8CO15255 209 aa11.43□□□□□ -0.58
PSPC1-201ENST00000338910 DNAH17Q9UFH2 4485 aa11.42□□□□□ -0.58
PSPC1-201ENST00000338910 NDUFS5O43920 106 aa11.42□□□□□ -0.58
PSPC1-201ENST00000338910 ATP11AUNQ6ZP68 121 aa11.41□□□□□ -0.58
PSPC1-201ENST00000338910 H0Y9J4 135 aa11.4□□□□□ -0.58
PSPC1-201ENST00000338910 SPTSSBQ8NFR3 76 aa11.4□□□□□ -0.58
PSPC1-201ENST00000338910 A6NED7 52 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms