RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 PSORS1C2Q9UIG4 136 aa10□□□□□ -0.81
HPS1-202ENST00000338546 Q6ZSA8 131 aa9.99□□□□□ -0.81
HPS1-202ENST00000338546 DNAH8Q96JB1 4490 aa9.99□□□□□ -0.81
HPS1-202ENST00000338546 DNAH5Q8TE73 4624 aa9.98□□□□□ -0.81
HPS1-202ENST00000338546 HYDINQ4G0P3 5121 aa9.98□□□□□ -0.81
HPS1-202ENST00000338546 LINC00336Q6ZUF6 198 aa9.97□□□□□ -0.81
HPS1-202ENST00000338546 Q6ZVQ6 151 aa9.97□□□□□ -0.81
HPS1-202ENST00000338546 Q8NBF4 154 aa9.97□□□□□ -0.81
HPS1-202ENST00000338546 ZNF706Q9Y5V0 76 aaPredicted RBP9.97□□□□□ -0.81
HPS1-202ENST00000338546 FAT2Q9NYQ8 4349 aa9.96□□□□□ -0.81
HPS1-202ENST00000338546 ZNF861PO60384 105 aa9.96□□□□□ -0.82
HPS1-202ENST00000338546 SPRR4Q96PI1 79 aa9.96□□□□□ -0.82
HPS1-202ENST00000338546 A0A1W2PNM2 257 aa9.94□□□□□ -0.82
HPS1-202ENST00000338546 CXCL6P80162 114 aa9.94□□□□□ -0.82
HPS1-202ENST00000338546 CIRBP-AS1Q8TBR5 109 aa9.94□□□□□ -0.82
HPS1-202ENST00000338546 SACSQ9NZJ4 4579 aa9.93□□□□□ -0.82
HPS1-202ENST00000338546 IGKV3D-7A0A0C4DH55 119 aa9.93□□□□□ -0.82
HPS1-202ENST00000338546 FAM30AQ9NZY2 134 aa9.93□□□□□ -0.82
HPS1-202ENST00000338546 LINC00483Q53H64 154 aa9.92□□□□□ -0.82
HPS1-202ENST00000338546 CRYGAP11844 174 aa9.92□□□□□ -0.82
HPS1-202ENST00000338546 KRTAP10-1P60331 282 aa9.92□□□□□ -0.82
HPS1-202ENST00000338546 PKD1P98161 4303 aa9.91□□□□□ -0.82
HPS1-202ENST00000338546 IGFL1Q6UW32 110 aa9.91□□□□□ -0.82
HPS1-202ENST00000338546 IGLV7-43P04211 117 aa9.9□□□□□ -0.82
HPS1-202ENST00000338546 RPL37AP61513 92 aaKnown RBP9.9□□□□□ -0.82
HPS1-202ENST00000338546 NREPQ16612 68 aa9.9□□□□□ -0.82
HPS1-202ENST00000338546 SCXQ7RTU7 201 aa9.9□□□□□ -0.82
HPS1-202ENST00000338546 HAMPP81172 84 aa9.88□□□□□ -0.83
HPS1-202ENST00000338546 FAM236AA0A1B0GUQ0 79 aa9.86□□□□□ -0.83
HPS1-202ENST00000338546 FAM236BA0A1B0GV22 79 aa9.86□□□□□ -0.83
HPS1-202ENST00000338546 HIST1H4AP62805 103 aaKnown RBP9.86□□□□□ -0.83
HPS1-202ENST00000338546 ANAPC13Q9BS18 74 aa9.84□□□□□ -0.83
HPS1-202ENST00000338546 BPY2O14599 106 aa9.81□□□□□ -0.84
HPS1-202ENST00000338546 ATOX1O00244 68 aa9.8□□□□□ -0.84
HPS1-202ENST00000338546 A0A1B0GVY2 172 aa9.79□□□□□ -0.84
HPS1-202ENST00000338546 A0A087WVE0 104 aa9.78□□□□□ -0.84
HPS1-202ENST00000338546 SRRM2Q9UQ35 2752 aaKnown RBP9.77□□□□□ -0.85
HPS1-202ENST00000338546 C9orf153Q5TBE3 101 aa9.76□□□□□ -0.85
HPS1-202ENST00000338546 A0A087WSZ3 146 aa9.75□□□□□ -0.85
HPS1-202ENST00000338546 A0A0G2JQZ4 141 aa9.75□□□□□ -0.85
HPS1-202ENST00000338546 IGLV9-49A0A0B4J1Y8 123 aa9.75□□□□□ -0.85
HPS1-202ENST00000338546 RYR2Q92736 4967 aa9.73□□□□□ -0.85
HPS1-202ENST00000338546 IGKV4-1P06312 121 aa9.71□□□□□ -0.86
HPS1-202ENST00000338546 LRP1BQ9NZR2 4599 aa9.7□□□□□ -0.86
HPS1-202ENST00000338546 MOBPQ13875 183 aa9.7□□□□□ -0.86
HPS1-202ENST00000338546 FAM229BQ4G0N7 80 aa9.7□□□□□ -0.86
HPS1-202ENST00000338546 SSBP3-AS1Q7Z2R9 100 aa9.7□□□□□ -0.86
HPS1-202ENST00000338546 SMIM20Q8N5G0 67 aa9.68□□□□□ -0.86
HPS1-202ENST00000338546 SS18L2Q9UHA2 77 aa9.68□□□□□ -0.86
HPS1-202ENST00000338546 DSCR10P59022 87 aa9.67□□□□□ -0.86
HPS1-202ENST00000338546 CD164Q04900 197 aa9.67□□□□□ -0.86
HPS1-202ENST00000338546 LINC00472Q9H8W2 130 aa9.67□□□□□ -0.86
HPS1-202ENST00000338546 ANAPC11Q9NYG5 84 aa9.67□□□□□ -0.86
HPS1-202ENST00000338546 J3KT08 172 aa9.66□□□□□ -0.86
HPS1-202ENST00000338546 UQCRQO14949 82 aa9.66□□□□□ -0.86
HPS1-202ENST00000338546 SERP2Q8N6R1 65 aa9.66□□□□□ -0.86
HPS1-202ENST00000338546 DYNC1H1Q14204 4646 aaKnown RBP9.65□□□□□ -0.86
HPS1-202ENST00000338546 COX7CP15954 63 aa9.65□□□□□ -0.86
HPS1-202ENST00000338546 Q8N9L7 120 aa9.64□□□□□ -0.87
HPS1-202ENST00000338546 PKHD1P08F94 4074 aa9.63□□□□□ -0.87
HPS1-202ENST00000338546 SPINK6Q6UWN8 80 aa9.62□□□□□ -0.87
HPS1-202ENST00000338546 VPS13BQ7Z7G8 4022 aa9.61□□□□□ -0.87
HPS1-202ENST00000338546 KMT2CQ8NEZ4 4911 aaKnown RBP9.6□□□□□ -0.87
HPS1-202ENST00000338546 CCDC179H3BU77 68 aa9.6□□□□□ -0.87
HPS1-202ENST00000338546 TRAV7A0A075B6U4 112 aa9.59□□□□□ -0.87
HPS1-202ENST00000338546 K7EQZ3 153 aa9.59□□□□□ -0.87
HPS1-202ENST00000338546 A8MWP4 228 aa9.58□□□□□ -0.88
HPS1-202ENST00000338546 KRTAP1-4P0C5Y4 121 aa9.58□□□□□ -0.88
HPS1-202ENST00000338546 DEFB116Q30KQ4 102 aa9.56□□□□□ -0.88
HPS1-202ENST00000338546 HRCT1Q6UXD1 115 aa9.56□□□□□ -0.88
HPS1-202ENST00000338546 PRR15Q8IV56 129 aa9.56□□□□□ -0.88
HPS1-202ENST00000338546 Q96NJ1 140 aa9.55□□□□□ -0.88
HPS1-202ENST00000338546 A0A087X002 238 aa9.54□□□□□ -0.88
HPS1-202ENST00000338546 HCG22E2RYF7 251 aa9.54□□□□□ -0.88
HPS1-202ENST00000338546 ASB16-AS1Q495Z4 193 aa9.54□□□□□ -0.88
HPS1-202ENST00000338546 KRTAP13-2Q52LG2 175 aa9.54□□□□□ -0.88
HPS1-202ENST00000338546 NDUFB1O75438 58 aa9.54□□□□□ -0.88
HPS1-202ENST00000338546 Q5XG85 94 aa9.53□□□□□ -0.88
HPS1-202ENST00000338546 APOBP04114 4563 aaKnown RBP9.53□□□□□ -0.88
HPS1-202ENST00000338546 PLA2G1BP04054 148 aaKnown RBP9.51□□□□□ -0.89
HPS1-202ENST00000338546 OCR1Q9BZK8 76 aa9.5□□□□□ -0.89
HPS1-202ENST00000338546 SMR3BP02814 79 aaPredicted RBP9.49□□□□□ -0.89
HPS1-202ENST00000338546 KRTAP10-4P60372 401 aaPredicted RBP9.48□□□□□ -0.89
HPS1-202ENST00000338546 KRTAP29-1A8MX34 341 aaPredicted RBP9.46□□□□□ -0.89
HPS1-202ENST00000338546 CDK2AP2O75956 126 aa9.46□□□□□ -0.89
HPS1-202ENST00000338546 TYMSOSQ8TAI1 123 aa9.45□□□□□ -0.9
HPS1-202ENST00000338546 LIMD2Q9BT23 127 aa9.44□□□□□ -0.9
HPS1-202ENST00000338546 A0A1B0GVX0 72 aa9.43□□□□□ -0.9
HPS1-202ENST00000338546 CASC2Q6XLA1 102 aa9.43□□□□□ -0.9
HPS1-202ENST00000338546 C4orf48Q5BLP8 95 aa9.42□□□□□ -0.9
HPS1-202ENST00000338546 RYR3Q15413 4870 aa9.42□□□□□ -0.9
HPS1-202ENST00000338546 SPINK1P00995 79 aa9.41□□□□□ -0.9
HPS1-202ENST00000338546 WFDC13Q8IUB5 93 aa9.41□□□□□ -0.9
HPS1-202ENST00000338546 MMP24-AS1A0A0U1RRL7 71 aa9.41□□□□□ -0.9
HPS1-202ENST00000338546 RPS29P62273 56 aaKnown RBP9.41□□□□□ -0.9
HPS1-202ENST00000338546 KLKP1Q107X0 134 aa9.41□□□□□ -0.9
HPS1-202ENST00000338546 SPAG11AQ6PDA7 123 aa9.4□□□□□ -0.9
HPS1-202ENST00000338546 C20orf197Q8N268 126 aa9.4□□□□□ -0.9
HPS1-202ENST00000338546 FAM229AH3BQW9 127 aa9.39□□□□□ -0.91
HPS1-202ENST00000338546 C8orf17Q9NRJ1 99 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms