RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 BCE1O60756 84 aa14.47□□□□□ -0.09
TSEN54-201ENST00000333213 COX7BP24311 80 aa14.47□□□□□ -0.09
TSEN54-201ENST00000333213 REG3GQ6UW15 175 aa14.47□□□□□ -0.09
TSEN54-201ENST00000333213 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.47□□□□□ -0.09
TSEN54-201ENST00000333213 LINC00528Q8N1L1 170 aa14.47□□□□□ -0.09
TSEN54-201ENST00000333213 HAMPP81172 84 aa14.46□□□□□ -0.09
TSEN54-201ENST00000333213 SCXQ7RTU7 201 aa14.45□□□□□ -0.1
TSEN54-201ENST00000333213 LAMTOR3Q9UHA4 124 aa14.45□□□□□ -0.1
TSEN54-201ENST00000333213 DSCR8Q96T75 97 aa14.43□□□□□ -0.1
TSEN54-201ENST00000333213 TMEM258P61165 79 aa14.43□□□□□ -0.1
TSEN54-201ENST00000333213 RPS28P62857 69 aaKnown RBP14.43□□□□□ -0.1
TSEN54-201ENST00000333213 Q6ZQY7 126 aa14.43□□□□□ -0.1
TSEN54-201ENST00000333213 Q6ZRX8 168 aa14.42□□□□□ -0.1
TSEN54-201ENST00000333213 Q9BRP9 147 aa14.41□□□□□ -0.1
TSEN54-201ENST00000333213 ETDCA0A1B0GVM5 59 aa14.4□□□□□ -0.1
TSEN54-201ENST00000333213 J3KT08 172 aa14.39□□□□□ -0.11
TSEN54-201ENST00000333213 APOBP04114 4563 aaKnown RBP14.38□□□□□ -0.11
TSEN54-201ENST00000333213 FAM19A1Q7Z5A9 133 aa14.37□□□□□ -0.11
TSEN54-201ENST00000333213 TRBV7-4A0A0J9YYF1 115 aa14.36□□□□□ -0.11
TSEN54-201ENST00000333213 CXCL6P80162 114 aa14.36□□□□□ -0.11
TSEN54-201ENST00000333213 PRLHP81277 87 aa14.36□□□□□ -0.11
TSEN54-201ENST00000333213 PSORS1C2Q9UIG4 136 aa14.35□□□□□ -0.11
TSEN54-201ENST00000333213 Q6ZVQ6 151 aa14.34□□□□□ -0.11
TSEN54-201ENST00000333213 LINC01547P58512 204 aaPredicted RBP14.33□□□□□ -0.11
TSEN54-201ENST00000333213 SRRM2Q9UQ35 2752 aaKnown RBP14.33□□□□□ -0.12
TSEN54-201ENST00000333213 ERC2-IT1O76042 136 aa14.32□□□□□ -0.12
TSEN54-201ENST00000333213 CYSTM1Q9H1C7 97 aa14.31□□□□□ -0.12
TSEN54-201ENST00000333213 KRTAP13-1Q8IUC0 172 aa14.3□□□□□ -0.12
TSEN54-201ENST00000333213 DHRS4-AS1Q9P1J3 65 aa14.29□□□□□ -0.12
TSEN54-201ENST00000333213 VPS13BQ7Z7G8 4022 aa14.28□□□□□ -0.12
TSEN54-201ENST00000333213 H0Y9J4 135 aa14.27□□□□□ -0.12
TSEN54-201ENST00000333213 TRAV7A0A075B6U4 112 aa14.27□□□□□ -0.13
TSEN54-201ENST00000333213 C1orf137Q5JT78 98 aa14.25□□□□□ -0.13
TSEN54-201ENST00000333213 UBE2AP49459 152 aa14.25□□□□□ -0.13
TSEN54-201ENST00000333213 ST20-AS1Q8NBB2 130 aa14.25□□□□□ -0.13
TSEN54-201ENST00000333213 HIGD2AQ9BW72 106 aa14.25□□□□□ -0.13
TSEN54-201ENST00000333213 EPPK1P58107 5090 aaKnown RBP14.22□□□□□ -0.13
TSEN54-201ENST00000333213 FAT1Q14517 4588 aa14.2□□□□□ -0.14
TSEN54-201ENST00000333213 Q8N377 158 aa14.18□□□□□ -0.14
TSEN54-201ENST00000333213 DEFB105AQ8NG35 78 aa14.18□□□□□ -0.14
TSEN54-201ENST00000333213 IGLV5-48A0A075B6I7 105 aa14.16□□□□□ -0.14
TSEN54-201ENST00000333213 IGLV7-43P04211 117 aa14.15□□□□□ -0.14
TSEN54-201ENST00000333213 ZNF861PO60384 105 aa14.15□□□□□ -0.14
TSEN54-201ENST00000333213 KLKP1Q107X0 134 aa14.14□□□□□ -0.15
TSEN54-201ENST00000333213 C20orf197Q8N268 126 aa14.14□□□□□ -0.15
TSEN54-201ENST00000333213 A0A1B0GW54 56 aa14.12□□□□□ -0.15
TSEN54-201ENST00000333213 SMR3BP02814 79 aaPredicted RBP14.11□□□□□ -0.15
TSEN54-201ENST00000333213 HSPG2P98160 4391 aa14.1□□□□□ -0.15
TSEN54-201ENST00000333213 SMIM29Q86T20 159 aa14.07□□□□□ -0.16
TSEN54-201ENST00000333213 H7BZZ5 65 aa14.06□□□□□ -0.16
TSEN54-201ENST00000333213 FAM236DA0A1B0GTK5 79 aa14.05□□□□□ -0.16
TSEN54-201ENST00000333213 FAM236CP0DP71 79 aa14.05□□□□□ -0.16
TSEN54-201ENST00000333213 NDUFC1O43677 76 aa14.04□□□□□ -0.16
TSEN54-201ENST00000333213 RYR1P21817 5038 aa14.04□□□□□ -0.16
TSEN54-201ENST00000333213 SPRR1BP22528 89 aa14.02□□□□□ -0.16
TSEN54-201ENST00000333213 NREPQ16612 68 aa14.02□□□□□ -0.16
TSEN54-201ENST00000333213 SPRR4Q96PI1 79 aa14.02□□□□□ -0.16
TSEN54-201ENST00000333213 OXTP01178 125 aa14□□□□□ -0.17
TSEN54-201ENST00000333213 RPL37AP61513 92 aaKnown RBP14□□□□□ -0.17
TSEN54-201ENST00000333213 KIAA1109Q2LD37 5005 aa14□□□□□ -0.17
TSEN54-201ENST00000333213 KRTAP10-4P60372 401 aaPredicted RBP13.99□□□□□ -0.17
TSEN54-201ENST00000333213 IGKV4-1P06312 121 aa13.98□□□□□ -0.17
TSEN54-201ENST00000333213 SERP1Q9Y6X1 66 aa13.98□□□□□ -0.17
TSEN54-201ENST00000333213 BPY2O14599 106 aa13.97□□□□□ -0.17
TSEN54-201ENST00000333213 CDK2AP2O75956 126 aa13.97□□□□□ -0.17
TSEN54-201ENST00000333213 LINC00483Q53H64 154 aa13.96□□□□□ -0.17
TSEN54-201ENST00000333213 ANAPC11Q9NYG5 84 aa13.96□□□□□ -0.17
TSEN54-201ENST00000333213 ATP5EP56381 51 aaPredicted RBP13.95□□□□□ -0.18
TSEN54-201ENST00000333213 C5orf47Q569G3 176 aa13.95□□□□□ -0.18
TSEN54-201ENST00000333213 ZNF706Q9Y5V0 76 aaPredicted RBP13.93□□□□□ -0.18
TSEN54-201ENST00000333213 KRTAP17-1Q9BYP8 105 aa13.9□□□□□ -0.18
TSEN54-201ENST00000333213 SNURFQ9Y675 71 aa13.89□□□□□ -0.19
TSEN54-201ENST00000333213 F8WEM9 126 aa13.88□□□□□ -0.19
TSEN54-201ENST00000333213 OCR1Q9BZK8 76 aa13.88□□□□□ -0.19
TSEN54-201ENST00000333213 Q5XG85 94 aa13.88□□□□□ -0.19
TSEN54-201ENST00000333213 Q8NBF4 154 aa13.88□□□□□ -0.19
TSEN54-201ENST00000333213 TMEM254Q8TBM7 123 aa13.88□□□□□ -0.19
TSEN54-201ENST00000333213 A0A0G2JQZ4 141 aa13.87□□□□□ -0.19
TSEN54-201ENST00000333213 A0A1W2PNM2 257 aa13.86□□□□□ -0.19
TSEN54-201ENST00000333213 IGLV8-61A0A075B6I0 122 aa13.86□□□□□ -0.19
TSEN54-201ENST00000333213 KRTAP1-4P0C5Y4 121 aa13.84□□□□□ -0.19
TSEN54-201ENST00000333213 SPINK6Q6UWN8 80 aa13.84□□□□□ -0.19
TSEN54-201ENST00000333213 Q8N9L7 120 aa13.83□□□□□ -0.2
TSEN54-201ENST00000333213 IGLV9-49A0A0B4J1Y8 123 aa13.82□□□□□ -0.2
TSEN54-201ENST00000333213 IGFL1Q6UW32 110 aa13.82□□□□□ -0.2
TSEN54-201ENST00000333213 A0A0U1RQV1 116 aa13.8□□□□□ -0.2
TSEN54-201ENST00000333213 A0A087X002 238 aa13.79□□□□□ -0.2
TSEN54-201ENST00000333213 PKHD1L1Q86WI1 4243 aa13.78□□□□□ -0.2
TSEN54-201ENST00000333213 FAM229AH3BQW9 127 aa13.78□□□□□ -0.2
TSEN54-201ENST00000333213 Q5VSD8 79 aa13.78□□□□□ -0.2
TSEN54-201ENST00000333213 SMIM26A0A096LP01 95 aa13.75□□□□□ -0.21
TSEN54-201ENST00000333213 PLA2G1BP04054 148 aaKnown RBP13.75□□□□□ -0.21
TSEN54-201ENST00000333213 MOBPQ13875 183 aa13.75□□□□□ -0.21
TSEN54-201ENST00000333213 C4orf26Q17RF5 130 aa13.74□□□□□ -0.21
TSEN54-201ENST00000333213 KRTAP13-2Q52LG2 175 aa13.73□□□□□ -0.21
TSEN54-201ENST00000333213 FAM229BQ4G0N7 80 aa13.71□□□□□ -0.21
TSEN54-201ENST00000333213 DSCR10P59022 87 aa13.69□□□□□ -0.22
TSEN54-201ENST00000333213 Q8N1X5 172 aa13.67□□□□□ -0.22
TSEN54-201ENST00000333213 HRCT1Q6UXD1 115 aa13.66□□□□□ -0.22
TSEN54-201ENST00000333213 BIRC6Q9NR09 4857 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms