RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 PLA2G2DQ9UNK4 145 aa15.58■□□□□ 0.08
SOX1-201ENST00000330949 IGLV1-50A0A075B6I6 118 aa15.58■□□□□ 0.08
SOX1-201ENST00000330949 FBN1P35555 2871 aaKnown RBP15.57■□□□□ 0.08
SOX1-201ENST00000330949 F8P00451 2351 aa15.57■□□□□ 0.08
SOX1-201ENST00000330949 DEFB116Q30KQ4 102 aa15.57■□□□□ 0.08
SOX1-201ENST00000330949 RBM12B-AS1Q9P1G2 102 aa15.56■□□□□ 0.08
SOX1-201ENST00000330949 IGKV2D-24A0A075B6R9 120 aa15.55■□□□□ 0.08
SOX1-201ENST00000330949 Q75L30 129 aa15.55■□□□□ 0.08
SOX1-201ENST00000330949 H0Y9P7 68 aa15.55■□□□□ 0.08
SOX1-201ENST00000330949 LINC00476Q8WZB0 136 aa15.55■□□□□ 0.08
SOX1-201ENST00000330949 NDUFS5O43920 106 aa15.54■□□□□ 0.08
SOX1-201ENST00000330949 OXLD1Q5BKU9 147 aa15.53■□□□□ 0.08
SOX1-201ENST00000330949 IGLV5-37A0A075B6J1 123 aa15.51■□□□□ 0.07
SOX1-201ENST00000330949 KRTAP29-1A8MX34 341 aaPredicted RBP15.5■□□□□ 0.07
SOX1-201ENST00000330949 TLX1NBP0CAT3 122 aa15.5■□□□□ 0.07
SOX1-201ENST00000330949 LCA10Q71F78 164 aa15.5■□□□□ 0.07
SOX1-201ENST00000330949 A6NED7 52 aa15.5■□□□□ 0.07
SOX1-201ENST00000330949 LOC101927531A0A1B0GV80 90 aa15.49■□□□□ 0.07
SOX1-201ENST00000330949 IGFL1Q6UW32 110 aa15.47■□□□□ 0.07
SOX1-201ENST00000330949 PHF5AQ7RTV0 110 aaKnown RBP15.47■□□□□ 0.07
SOX1-201ENST00000330949 H3BNG1 76 aa15.45■□□□□ 0.06
SOX1-201ENST00000330949 C9orf163Q8N9P6 203 aa15.45■□□□□ 0.06
SOX1-201ENST00000330949 FAM168BA1KXE4 195 aa15.44■□□□□ 0.06
SOX1-201ENST00000330949 CASC2Q6XLA1 102 aa15.44■□□□□ 0.06
SOX1-201ENST00000330949 A6NN06 94 aa15.44■□□□□ 0.06
SOX1-201ENST00000330949 A0A087WSZ3 146 aa15.44■□□□□ 0.06
SOX1-201ENST00000330949 CDC42SE1Q9NRR8 79 aa15.42■□□□□ 0.06
SOX1-201ENST00000330949 A0A0G2JQZ4 141 aa15.41■□□□□ 0.06
SOX1-201ENST00000330949 A0A1W2PNN7 141 aa15.41■□□□□ 0.06
SOX1-201ENST00000330949 COA5Q86WW8 74 aa15.41■□□□□ 0.06
SOX1-201ENST00000330949 RPL37AP61513 92 aaKnown RBP15.39■□□□□ 0.06
SOX1-201ENST00000330949 LINC01556Q5JQF7 62 aa15.37■□□□□ 0.05
SOX1-201ENST00000330949 IGLV8-61A0A075B6I0 122 aa15.35■□□□□ 0.05
SOX1-201ENST00000330949 IGLV7-46A0A075B6I9 117 aa15.35■□□□□ 0.05
SOX1-201ENST00000330949 REG3GQ6UW15 175 aa15.35■□□□□ 0.05
SOX1-201ENST00000330949 KRTAP7-1Q8IUC3 87 aa15.35■□□□□ 0.05
SOX1-201ENST00000330949 CMYA5Q8N3K9 4069 aa15.34■□□□□ 0.05
SOX1-201ENST00000330949 KRTAP10-11P60412 298 aa15.34■□□□□ 0.05
SOX1-201ENST00000330949 CNBPP62633 177 aaKnown RBP15.33■□□□□ 0.04
SOX1-201ENST00000330949 COL6A5A8TX70 2615 aa15.32■□□□□ 0.04
SOX1-201ENST00000330949 C7orf65Q6ZTY9 151 aa15.31■□□□□ 0.04
SOX1-201ENST00000330949 A8MWP4 228 aa15.3■□□□□ 0.04
SOX1-201ENST00000330949 NBEAL1Q6ZS30 2694 aa15.27■□□□□ 0.03
SOX1-201ENST00000330949 LINC01558Q9Y6Z2 57 aa15.26■□□□□ 0.03
SOX1-201ENST00000330949 MOBPQ13875 183 aa15.22■□□□□ 0.03
SOX1-201ENST00000330949 DEFB131BA0A096LNP1 70 aa15.21■□□□□ 0.03
SOX1-201ENST00000330949 PLAC8Q9NZF1 115 aa15.21■□□□□ 0.02
SOX1-201ENST00000330949 LINC00472Q9H8W2 130 aa15.19■□□□□ 0.02
SOX1-201ENST00000330949 SPAG11AQ6PDA7 123 aa15.19■□□□□ 0.02
SOX1-201ENST00000330949 DNAH10OSP0CZ25 163 aa15.16■□□□□ 0.02
SOX1-201ENST00000330949 PRLHP81277 87 aa15.16■□□□□ 0.02
SOX1-201ENST00000330949 C11orf45Q8TAV5 145 aa15.15■□□□□ 0.02
SOX1-201ENST00000330949 CSMD3Q7Z407 3707 aa15.15■□□□□ 0.02
SOX1-201ENST00000330949 PCOTHQ58A44 107 aa15.14■□□□□ 0.01
SOX1-201ENST00000330949 CASC10Q5T4H9 136 aa15.13■□□□□ 0.01
SOX1-201ENST00000330949 MMP24-AS1A0A0U1RRL7 71 aa15.13■□□□□ 0.01
SOX1-201ENST00000330949 H0Y9J4 135 aa15.12■□□□□ 0.01
SOX1-201ENST00000330949 LYSTQ99698 3801 aa15.12■□□□□ 0.01
SOX1-201ENST00000330949 TP53AIP1Q9HCN2 124 aa15.09■□□□□ 0.01
SOX1-201ENST00000330949 MGAM2Q2M2H8 2515 aa15.07■□□□□ 0
SOX1-201ENST00000330949 SPINK7P58062 85 aa15.07■□□□□ 0
SOX1-201ENST00000330949 KRTAP24-1Q3LI83 254 aa15.05■□□□□ -0
SOX1-201ENST00000330949 DNAH3Q8TD57 4116 aa15.03■□□□□ -0
SOX1-201ENST00000330949 SPRR1BP22528 89 aa15.02□□□□□ -0.01
SOX1-201ENST00000330949 C4orf48Q5BLP8 95 aa15.01□□□□□ -0.01
SOX1-201ENST00000330949 TENM2Q9NT68 2774 aa15.01□□□□□ -0.01
SOX1-201ENST00000330949 Q6ZR54 194 aa15□□□□□ -0.01
SOX1-201ENST00000330949 DNAH10Q8IVF4 4471 aa14.98□□□□□ -0.01
SOX1-201ENST00000330949 HRES1P13985 223 aa14.98□□□□□ -0.01
SOX1-201ENST00000330949 SRRM2Q9UQ35 2752 aaKnown RBP14.97□□□□□ -0.01
SOX1-201ENST00000330949 STAB2Q8WWQ8 2551 aa14.97□□□□□ -0.01
SOX1-201ENST00000330949 IGKV2-24A0A0C4DH68 120 aa14.97□□□□□ -0.01
SOX1-201ENST00000330949 ASB16-AS1Q495Z4 193 aa14.96□□□□□ -0.01
SOX1-201ENST00000330949 C8orf87E5RJ46 101 aa14.93□□□□□ -0.02
SOX1-201ENST00000330949 HUWE1Q7Z6Z7 4374 aaKnown RBP14.92□□□□□ -0.02
SOX1-201ENST00000330949 DNAH1Q9P2D7 4330 aa14.92□□□□□ -0.02
SOX1-201ENST00000330949 A0A096LNI7 61 aa14.91□□□□□ -0.02
SOX1-201ENST00000330949 COL7A1Q02388 2944 aa14.89□□□□□ -0.03
SOX1-201ENST00000330949 LINC00313P59037 77 aa14.88□□□□□ -0.03
SOX1-201ENST00000330949 C8orf17Q9NRJ1 99 aa14.86□□□□□ -0.03
SOX1-201ENST00000330949 Q96NJ1 140 aa14.81□□□□□ -0.04
SOX1-201ENST00000330949 DNAH9Q9NYC9 4486 aa14.79□□□□□ -0.04
SOX1-201ENST00000330949 PRAC1Q96KF2 57 aa14.75□□□□□ -0.05
SOX1-201ENST00000330949 KRTAP11-1Q8IUC1 163 aa14.75□□□□□ -0.05
SOX1-201ENST00000330949 PRR26Q8N8Z3 221 aa14.74□□□□□ -0.05
SOX1-201ENST00000330949 DNAH7Q8WXX0 4024 aa14.74□□□□□ -0.05
SOX1-201ENST00000330949 PLA2G1BP04054 148 aaKnown RBP14.74□□□□□ -0.05
SOX1-201ENST00000330949 MRPL34Q9BQ48 92 aaKnown RBP14.73□□□□□ -0.05
SOX1-201ENST00000330949 A0A1B0GVX0 72 aa14.73□□□□□ -0.05
SOX1-201ENST00000330949 IGHV6-1A0A0B4J1U7 121 aa14.72□□□□□ -0.05
SOX1-201ENST00000330949 KRTAP1-5Q9BYS1 174 aa14.7□□□□□ -0.06
SOX1-201ENST00000330949 K7EIL1 84 aa14.69□□□□□ -0.06
SOX1-201ENST00000330949 CDK2AP2O75956 126 aa14.68□□□□□ -0.06
SOX1-201ENST00000330949 LINC01554Q52M75 96 aa14.67□□□□□ -0.06
SOX1-201ENST00000330949 MDFIQ99750 246 aa14.66□□□□□ -0.06
SOX1-201ENST00000330949 CHTF8P0CG12 524 aa14.65□□□□□ -0.06
SOX1-201ENST00000330949 ACYP2P14621 99 aa14.65□□□□□ -0.06
SOX1-201ENST00000330949 ADM2Q7Z4H4 148 aa14.62□□□□□ -0.07
SOX1-201ENST00000330949 A0A087X002 238 aa14.62□□□□□ -0.07
SOX1-201ENST00000330949 IGLV9-49A0A0B4J1Y8 123 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms