RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 RPL37AP61513 92 aaKnown RBP10.15□□□□□ -0.78
PDLIM1-201ENST00000329399 Q9BRP9 147 aa10.15□□□□□ -0.78
PDLIM1-201ENST00000329399 LAMTOR3Q9UHA4 124 aa10.14□□□□□ -0.79
PDLIM1-201ENST00000329399 RBM3P98179 157 aaKnown RBP10.13□□□□□ -0.79
PDLIM1-201ENST00000329399 IGLV5-48A0A075B6I7 105 aa10.12□□□□□ -0.79
PDLIM1-201ENST00000329399 UBE2AP49459 152 aa10.1□□□□□ -0.79
PDLIM1-201ENST00000329399 NDUFV3P56181 108 aaKnown RBP10.1□□□□□ -0.79
PDLIM1-201ENST00000329399 SMCR5Q8TEV8 140 aa10.1□□□□□ -0.79
PDLIM1-201ENST00000329399 DSCR8Q96T75 97 aa10.1□□□□□ -0.79
PDLIM1-201ENST00000329399 VPS25Q9BRG1 176 aa10.1□□□□□ -0.79
PDLIM1-201ENST00000329399 LOC110117498A0A087WWA1 95 aa10.09□□□□□ -0.79
PDLIM1-201ENST00000329399 CCKP06307 115 aa10.07□□□□□ -0.8
PDLIM1-201ENST00000329399 Q8N377 158 aa10.07□□□□□ -0.8
PDLIM1-201ENST00000329399 C14orf132Q9NPU4 83 aa10.07□□□□□ -0.8
PDLIM1-201ENST00000329399 LINC01547P58512 204 aaPredicted RBP10.06□□□□□ -0.8
PDLIM1-201ENST00000329399 KRTAP13-1Q8IUC0 172 aa10.05□□□□□ -0.8
PDLIM1-201ENST00000329399 KRTAP11-1Q8IUC1 163 aa10.05□□□□□ -0.8
PDLIM1-201ENST00000329399 PRLHP81277 87 aa10.04□□□□□ -0.8
PDLIM1-201ENST00000329399 SPRR1BP22528 89 aa10.04□□□□□ -0.8
PDLIM1-201ENST00000329399 HIGD2AQ9BW72 106 aa10.04□□□□□ -0.8
PDLIM1-201ENST00000329399 A0A1B0GW54 56 aa10.03□□□□□ -0.8
PDLIM1-201ENST00000329399 ERC2-IT1O76042 136 aa10.03□□□□□ -0.8
PDLIM1-201ENST00000329399 GAGE2AQ6NT46 116 aa10.03□□□□□ -0.8
PDLIM1-201ENST00000329399 DEFB105AQ8NG35 78 aa10.03□□□□□ -0.8
PDLIM1-201ENST00000329399 TRBV7-4A0A0J9YYF1 115 aa10.02□□□□□ -0.81
PDLIM1-201ENST00000329399 KRTAP29-1A8MX34 341 aaPredicted RBP10.02□□□□□ -0.81
PDLIM1-201ENST00000329399 Q6ZQT0 140 aa10.02□□□□□ -0.81
PDLIM1-201ENST00000329399 PSORS1C2Q9UIG4 136 aa10.02□□□□□ -0.81
PDLIM1-201ENST00000329399 ZNF706Q9Y5V0 76 aaPredicted RBP10.02□□□□□ -0.81
PDLIM1-201ENST00000329399 TNXBP22105 4242 aa10.01□□□□□ -0.81
PDLIM1-201ENST00000329399 F8WEM9 126 aa10□□□□□ -0.81
PDLIM1-201ENST00000329399 CDIP1Q9H305 208 aa10□□□□□ -0.81
PDLIM1-201ENST00000329399 ZNF861PO60384 105 aa9.99□□□□□ -0.81
PDLIM1-201ENST00000329399 ST20-AS1Q8NBB2 130 aa9.99□□□□□ -0.81
PDLIM1-201ENST00000329399 C1orf137Q5JT78 98 aa9.98□□□□□ -0.81
PDLIM1-201ENST00000329399 SIGMAR1Q99720 223 aa9.98□□□□□ -0.81
PDLIM1-201ENST00000329399 IGLV8-61A0A075B6I0 122 aa9.96□□□□□ -0.82
PDLIM1-201ENST00000329399 J3QL48 77 aa9.96□□□□□ -0.82
PDLIM1-201ENST00000329399 IGLV7-43P04211 117 aa9.95□□□□□ -0.82
PDLIM1-201ENST00000329399 SMIM29Q86T20 159 aa9.95□□□□□ -0.82
PDLIM1-201ENST00000329399 LINC00643Q86TS7 51 aa9.94□□□□□ -0.82
PDLIM1-201ENST00000329399 OXTP01178 125 aa9.93□□□□□ -0.82
PDLIM1-201ENST00000329399 MT1HL1P0DM35 61 aa9.93□□□□□ -0.82
PDLIM1-201ENST00000329399 Q6JHZ5 121 aa9.93□□□□□ -0.82
PDLIM1-201ENST00000329399 A0A1B0GV72 72 aa9.92□□□□□ -0.82
PDLIM1-201ENST00000329399 LINC00483Q53H64 154 aa9.91□□□□□ -0.82
PDLIM1-201ENST00000329399 UBL5Q9BZL1 73 aa9.91□□□□□ -0.82
PDLIM1-201ENST00000329399 SPRR4Q96PI1 79 aa9.91□□□□□ -0.82
PDLIM1-201ENST00000329399 LINC00846Q9NV44 126 aa9.89□□□□□ -0.83
PDLIM1-201ENST00000329399 ATP5EP2Q5VTU8 51 aa9.88□□□□□ -0.83
PDLIM1-201ENST00000329399 IMUPQ9GZP8 106 aa9.88□□□□□ -0.83
PDLIM1-201ENST00000329399 SPINK6Q6UWN8 80 aa9.87□□□□□ -0.83
PDLIM1-201ENST00000329399 C3orf22Q8N5N4 141 aa9.87□□□□□ -0.83
PDLIM1-201ENST00000329399 Q8NBF4 154 aa9.86□□□□□ -0.83
PDLIM1-201ENST00000329399 HMCN2Q8NDA2 5059 aa9.86□□□□□ -0.83
PDLIM1-201ENST00000329399 SCGB1A1P11684 91 aa9.85□□□□□ -0.83
PDLIM1-201ENST00000329399 Q6Q795 121 aa9.85□□□□□ -0.83
PDLIM1-201ENST00000329399 CRYGAP11844 174 aa9.83□□□□□ -0.84
PDLIM1-201ENST00000329399 TRBV7-7A0A0K0K1E9 115 aa9.82□□□□□ -0.84
PDLIM1-201ENST00000329399 MT-ATP8P03928 68 aa9.82□□□□□ -0.84
PDLIM1-201ENST00000329399 IGFL1Q6UW32 110 aa9.81□□□□□ -0.84
PDLIM1-201ENST00000329399 A0A1W2PNM2 257 aa9.8□□□□□ -0.84
PDLIM1-201ENST00000329399 KRTAP10-8P60410 259 aa9.79□□□□□ -0.84
PDLIM1-201ENST00000329399 NREPQ16612 68 aa9.79□□□□□ -0.84
PDLIM1-201ENST00000329399 Q6ZVQ6 151 aa9.79□□□□□ -0.84
PDLIM1-201ENST00000329399 CXCL6P80162 114 aa9.78□□□□□ -0.84
PDLIM1-201ENST00000329399 FAM229BQ4G0N7 80 aa9.78□□□□□ -0.84
PDLIM1-201ENST00000329399 KRTAP1-4P0C5Y4 121 aa9.74□□□□□ -0.85
PDLIM1-201ENST00000329399 SSBP3-AS1Q7Z2R9 100 aa9.74□□□□□ -0.85
PDLIM1-201ENST00000329399 C9orf153Q5TBE3 101 aa9.73□□□□□ -0.85
PDLIM1-201ENST00000329399 IGLV9-49A0A0B4J1Y8 123 aa9.72□□□□□ -0.85
PDLIM1-201ENST00000329399 PRR26Q8N8Z3 221 aa9.72□□□□□ -0.85
PDLIM1-201ENST00000329399 CD164Q04900 197 aa9.7□□□□□ -0.86
PDLIM1-201ENST00000329399 SS18L2Q9UHA2 77 aa9.68□□□□□ -0.86
PDLIM1-201ENST00000329399 IGKV3D-7A0A0C4DH55 119 aa9.67□□□□□ -0.86
PDLIM1-201ENST00000329399 BPY2O14599 106 aa9.67□□□□□ -0.86
PDLIM1-201ENST00000329399 MOBPQ13875 183 aa9.67□□□□□ -0.86
PDLIM1-201ENST00000329399 ANAPC11Q9NYG5 84 aa9.66□□□□□ -0.86
PDLIM1-201ENST00000329399 LRP2P98164 4655 aa9.65□□□□□ -0.86
PDLIM1-201ENST00000329399 UBR4Q5T4S7 5183 aa9.65□□□□□ -0.87
PDLIM1-201ENST00000329399 A0A087WSZ3 146 aa9.65□□□□□ -0.87
PDLIM1-201ENST00000329399 J3KT08 172 aa9.62□□□□□ -0.87
PDLIM1-201ENST00000329399 A0A087X002 238 aa9.61□□□□□ -0.87
PDLIM1-201ENST00000329399 HIST1H4AP62805 103 aaKnown RBP9.61□□□□□ -0.87
PDLIM1-201ENST00000329399 A0A0G2JQZ4 141 aa9.59□□□□□ -0.87
PDLIM1-201ENST00000329399 LINC00472Q9H8W2 130 aa9.56□□□□□ -0.88
PDLIM1-201ENST00000329399 FAM236AA0A1B0GUQ0 79 aa9.55□□□□□ -0.88
PDLIM1-201ENST00000329399 FAM236BA0A1B0GV22 79 aa9.55□□□□□ -0.88
PDLIM1-201ENST00000329399 ASB16-AS1Q495Z4 193 aa9.55□□□□□ -0.88
PDLIM1-201ENST00000329399 KRTAP13-2Q52LG2 175 aa9.55□□□□□ -0.88
PDLIM1-201ENST00000329399 Q5XG85 94 aa9.55□□□□□ -0.88
PDLIM1-201ENST00000329399 LPAP08519 4548 aa9.55□□□□□ -0.88
PDLIM1-201ENST00000329399 PCP4P48539 62 aa9.54□□□□□ -0.88
PDLIM1-201ENST00000329399 ATOX1O00244 68 aa9.53□□□□□ -0.88
PDLIM1-201ENST00000329399 IGKV4-1P06312 121 aa9.52□□□□□ -0.89
PDLIM1-201ENST00000329399 C4orf48Q5BLP8 95 aa9.52□□□□□ -0.89
PDLIM1-201ENST00000329399 TYMSOSQ8TAI1 123 aa9.52□□□□□ -0.89
PDLIM1-201ENST00000329399 DSCR10P59022 87 aa9.51□□□□□ -0.89
PDLIM1-201ENST00000329399 SPAG11AQ6PDA7 123 aa9.51□□□□□ -0.89
PDLIM1-201ENST00000329399 SMIM20Q8N5G0 67 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms