RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 KRTAP4-6Q9BYQ5 205 aa3.09□□□□□ -1.91
LRIT3-201ENST00000327908 HAMPP81172 84 aa3.09□□□□□ -1.92
LRIT3-201ENST00000327908 ASB16-AS1Q495Z4 193 aa3.09□□□□□ -1.92
LRIT3-201ENST00000327908 TEN1Q86WV5 123 aa3.09□□□□□ -1.92
LRIT3-201ENST00000327908 LOC110117498A0A087WWA1 95 aa3.08□□□□□ -1.92
LRIT3-201ENST00000327908 Q8N377 158 aa3.08□□□□□ -1.92
LRIT3-201ENST00000327908 C9JAW5 83 aa3.08□□□□□ -1.92
LRIT3-201ENST00000327908 KRTAP1-4P0C5Y4 121 aa3.08□□□□□ -1.92
LRIT3-201ENST00000327908 DEFB105AQ8NG35 78 aa3.08□□□□□ -1.92
LRIT3-201ENST00000327908 DNAH8Q96JB1 4490 aa3.08□□□□□ -1.92
LRIT3-201ENST00000327908 TRBV7-4A0A0J9YYF1 115 aa3.08□□□□□ -1.92
LRIT3-201ENST00000327908 J3KT08 172 aa3.08□□□□□ -1.92
LRIT3-201ENST00000327908 J3QR89 54 aa3.08□□□□□ -1.92
LRIT3-201ENST00000327908 KRTAP10-8P60410 259 aa3.08□□□□□ -1.92
LRIT3-201ENST00000327908 H3BMG7 143 aa3.07□□□□□ -1.92
LRIT3-201ENST00000327908 ERC2-IT1O76042 136 aa3.07□□□□□ -1.92
LRIT3-201ENST00000327908 MOBPQ13875 183 aa3.07□□□□□ -1.92
LRIT3-201ENST00000327908 FRAS1Q86XX4 4008 aa3.07□□□□□ -1.92
LRIT3-201ENST00000327908 LINC01547P58512 204 aaPredicted RBP3.07□□□□□ -1.92
LRIT3-201ENST00000327908 FAT2Q9NYQ8 4349 aa3.07□□□□□ -1.92
LRIT3-201ENST00000327908 ACYP1P07311 99 aa3.06□□□□□ -1.92
LRIT3-201ENST00000327908 FAM218AQ96MZ4 157 aa3.06□□□□□ -1.92
LRIT3-201ENST00000327908 IGLV9-49A0A0B4J1Y8 123 aa3.06□□□□□ -1.92
LRIT3-201ENST00000327908 ST20-AS1Q8NBB2 130 aa3.06□□□□□ -1.92
LRIT3-201ENST00000327908 TRBV7-7A0A0K0K1E9 115 aa3.05□□□□□ -1.92
LRIT3-201ENST00000327908 SMIM29Q86T20 159 aa3.05□□□□□ -1.92
LRIT3-201ENST00000327908 OBSCN-AS1Q96MR7 158 aa3.05□□□□□ -1.92
LRIT3-201ENST00000327908 PRR26Q8N8Z3 221 aa3.05□□□□□ -1.92
LRIT3-201ENST00000327908 SVIPQ8NHG7 77 aa3.04□□□□□ -1.92
LRIT3-201ENST00000327908 KRTAP13-2Q52LG2 175 aa3.03□□□□□ -1.92
LRIT3-201ENST00000327908 IGFL1Q6UW32 110 aa3.03□□□□□ -1.92
LRIT3-201ENST00000327908 C3orf22Q8N5N4 141 aa3.03□□□□□ -1.92
LRIT3-201ENST00000327908 CCKP06307 115 aa3.03□□□□□ -1.92
LRIT3-201ENST00000327908 BIRC6Q9NR09 4857 aa3.03□□□□□ -1.93
LRIT3-201ENST00000327908 FAM240AA0A1B0GVK7 77 aa3.02□□□□□ -1.93
LRIT3-201ENST00000327908 ATP5EP2Q5VTU8 51 aa3.02□□□□□ -1.93
LRIT3-201ENST00000327908 C8orf87E5RJ46 101 aa3.02□□□□□ -1.93
LRIT3-201ENST00000327908 NDUFB1O75438 58 aa3.02□□□□□ -1.93
LRIT3-201ENST00000327908 Q6ZQT0 140 aa3.02□□□□□ -1.93
LRIT3-201ENST00000327908 NAA38Q9BRA0 125 aaKnown RBP3.02□□□□□ -1.93
LRIT3-201ENST00000327908 UBL5Q9BZL1 73 aa3.02□□□□□ -1.93
LRIT3-201ENST00000327908 KMT2AQ03164 3969 aa3.02□□□□□ -1.93
LRIT3-201ENST00000327908 HECTD4Q9Y4D8 3996 aa3.02□□□□□ -1.93
LRIT3-201ENST00000327908 PKD1P98161 4303 aa3.02□□□□□ -1.93
LRIT3-201ENST00000327908 A0A087X002 238 aa3.01□□□□□ -1.93
LRIT3-201ENST00000327908 PRO0461Q9UI25 63 aa3.01□□□□□ -1.93
LRIT3-201ENST00000327908 MT1HL1P0DM35 61 aa3□□□□□ -1.93
LRIT3-201ENST00000327908 PKHD1L1Q86WI1 4243 aa3□□□□□ -1.93
LRIT3-201ENST00000327908 NREPQ16612 68 aa3□□□□□ -1.93
LRIT3-201ENST00000327908 HYDINQ4G0P3 5121 aa2.99□□□□□ -1.93
LRIT3-201ENST00000327908 LCE2DQ5TA82 110 aaPredicted RBP2.99□□□□□ -1.93
LRIT3-201ENST00000327908 VPS13BQ7Z7G8 4022 aa2.99□□□□□ -1.93
LRIT3-201ENST00000327908 KMT2CQ8NEZ4 4911 aaKnown RBP2.99□□□□□ -1.93
LRIT3-201ENST00000327908 SIGMAR1Q99720 223 aa2.99□□□□□ -1.93
LRIT3-201ENST00000327908 LRP1BQ9NZR2 4599 aa2.99□□□□□ -1.93
LRIT3-201ENST00000327908 VPS25Q9BRG1 176 aa2.98□□□□□ -1.93
LRIT3-201ENST00000327908 C14orf132Q9NPU4 83 aa2.98□□□□□ -1.93
LRIT3-201ENST00000327908 DNAH5Q8TE73 4624 aa2.98□□□□□ -1.93
LRIT3-201ENST00000327908 A0A087WSZ3 146 aa2.98□□□□□ -1.93
LRIT3-201ENST00000327908 A0A1W2PNM2 257 aa2.98□□□□□ -1.93
LRIT3-201ENST00000327908 K7ERU9 68 aa2.97□□□□□ -1.93
LRIT3-201ENST00000327908 TPRXLQ17RH7 258 aa2.97□□□□□ -1.93
LRIT3-201ENST00000327908 ANAPC11Q9NYG5 84 aa2.97□□□□□ -1.93
LRIT3-201ENST00000327908 APOBP04114 4563 aaKnown RBP2.97□□□□□ -1.93
LRIT3-201ENST00000327908 IGLV7-46A0A075B6I9 117 aa2.97□□□□□ -1.93
LRIT3-201ENST00000327908 RYR1P21817 5038 aa2.97□□□□□ -1.93
LRIT3-201ENST00000327908 CXCL6P80162 114 aa2.96□□□□□ -1.94
LRIT3-201ENST00000327908 BPY2O14599 106 aa2.96□□□□□ -1.94
LRIT3-201ENST00000327908 KRTAP4-5Q9BYR2 181 aa2.96□□□□□ -1.94
LRIT3-201ENST00000327908 SMCPP49901 116 aaPredicted RBP2.95□□□□□ -1.94
LRIT3-201ENST00000327908 ETDBQ3ZM63 59 aa2.95□□□□□ -1.94
LRIT3-201ENST00000327908 PRR4Q16378 134 aa2.95□□□□□ -1.94
LRIT3-201ENST00000327908 C1orf195Q5TG92 126 aa2.95□□□□□ -1.94
LRIT3-201ENST00000327908 RYR3Q15413 4870 aa2.95□□□□□ -1.94
LRIT3-201ENST00000327908 A8MWP4 228 aa2.95□□□□□ -1.94
LRIT3-201ENST00000327908 HRCT1Q6UXD1 115 aa2.95□□□□□ -1.94
LRIT3-201ENST00000327908 IGKV4-1P06312 121 aa2.94□□□□□ -1.94
LRIT3-201ENST00000327908 LINC00643Q86TS7 51 aa2.94□□□□□ -1.94
LRIT3-201ENST00000327908 PKHD1P08F94 4074 aa2.94□□□□□ -1.94
LRIT3-201ENST00000327908 LINC00472Q9H8W2 130 aa2.94□□□□□ -1.94
LRIT3-201ENST00000327908 SEC61BP60468 96 aaKnown RBP2.94□□□□□ -1.94
LRIT3-201ENST00000327908 HERC2O95714 4834 aa2.93□□□□□ -1.94
LRIT3-201ENST00000327908 A0A1B0GVX0 72 aa2.93□□□□□ -1.94
LRIT3-201ENST00000327908 PCP4P48539 62 aa2.92□□□□□ -1.94
LRIT3-201ENST00000327908 Q6ZVQ6 151 aa2.92□□□□□ -1.94
LRIT3-201ENST00000327908 TMEM254Q8TBM7 123 aa2.92□□□□□ -1.94
LRIT3-201ENST00000327908 LINC00313P59037 77 aa2.92□□□□□ -1.94
LRIT3-201ENST00000327908 HSPG2P98160 4391 aa2.92□□□□□ -1.94
LRIT3-201ENST00000327908 MTURNQ8N3F0 131 aa2.91□□□□□ -1.94
LRIT3-201ENST00000327908 IMUPQ9GZP8 106 aa2.91□□□□□ -1.94
LRIT3-201ENST00000327908 PRR15Q8IV56 129 aa2.91□□□□□ -1.94
LRIT3-201ENST00000327908 KRTAP17-1Q9BYP8 105 aa2.91□□□□□ -1.94
LRIT3-201ENST00000327908 CDIP1Q9H305 208 aa2.91□□□□□ -1.94
LRIT3-201ENST00000327908 A0A1B0GV72 72 aa2.9□□□□□ -1.94
LRIT3-201ENST00000327908 Q75L30 129 aa2.9□□□□□ -1.94
LRIT3-201ENST00000327908 TP53AIP1Q9HCN2 124 aa2.9□□□□□ -1.94
LRIT3-201ENST00000327908 A0A0U1RQV1 116 aa2.9□□□□□ -1.95
LRIT3-201ENST00000327908 KRTAP13-3Q3SY46 172 aa2.89□□□□□ -1.95
LRIT3-201ENST00000327908 SMIM20Q8N5G0 67 aa2.89□□□□□ -1.95
LRIT3-201ENST00000327908 Q96NJ1 140 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms